KEGG   Latimeria chalumnae (coelacanth): 102361872
Entry
102361872         CDS       T02913                                 
Symbol
SNX1
Name
(RefSeq) sorting nexin 1
  KO
K17917  sorting nexin-1/2
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102361872 (SNX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102361872 (SNX1)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lcm04990]
    102361872 (SNX1)
Membrane trafficking [BR:lcm04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    102361872 (SNX1)
Domain-containing proteins not elsewhere classified [BR:lcm04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   102361872 (SNX1)
SSDB
Motif
Pfam: Vps5 PX Sorting_nexin Cyclin_N2 GrpE YgaB VIR_N
Other DBs
NCBI-GeneID: 102361872
NCBI-ProteinID: XP_005994165
Ensembl: ENSLACG00000015898
LinkDB
Position
Un
AA seq 411 aa
MATSSSERIPPPFPESEDSETAGATGDGLDSDTEGEDIFTGSSKPLQPKVTITQPASSIS
KSNGPPLEEEQDLFVDATVELSLDSPQNNRKRDPAKPSTSAPSLTITVDEPSSNPQSKTC
EELEEEEEEDQFNLNVTVTDPEKIGDGMNAYMVYKVNTQTNLSMFKSKRFTVKRRFSDFL
GLYDKLCEKNLQNGLIIPPPPEKSLLGMTKVKVGKDDSSSTEFVERRRAALERYIQRIVT
HPSLLQDPDLREFLEKEELPRAVGTQALSGAGLLKMISRATDAVNKMTIKMNESDIGVFD
QRMKTWQRWQDAQTMLQKKREVEARLLWANKPDKLQQAKDEITEWEGKVAQYERDFERIS
ASVRKEVIRFEKEKTKDFKNQIVKYLETLLNSQQQLIKYWEAFLPEAKAIA
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggcgaccagcagttcggagcggatccctccgcctttcccggagagcgaggactcagaa
acggcgggggctaccggggatggcttggacagtgacactgagggcgaggacattttcacg
ggcagtagcaaaccattgcagccaaaggtcactattacacagccagcaagcagcatctcc
aaatccaacgggccgcctctggaggaggaacaggatttatttgtagatgccacagtggag
ctgtccttggacagtccgcagaataaccggaagagagatccagccaagccatccacctct
gctccttcattaaccatcacagttgacgagccttcctcaaacccccaatccaaaacatgc
gaggagcttgaagaggaagaagaggaggaccagtttaacctgaatgttacagtgactgac
ccagagaagatcggtgatggtatgaatgcctacatggtctacaaagttaatacacagacc
aacttgagtatgtttaagagtaaaaggtttacagtcaagaggaggttcagtgatttcctg
ggcttgtatgacaaactctgtgagaagaacctgcagaatggattaatcatccctccgccc
ccggaaaagagcttattaggtatgaccaaagtgaaagtgggcaaagatgattcttcttcc
acagagtttgtagaaagaaggcgagcggcattagagagatacattcagagaatagtcact
cacccatcactactacaggatccagatctccgagaatttctagaaaaagaggagttgcct
cgagcggtaggcactcaggcgctgagtggagctggtctcctgaaaatgatatccagggca
acagatgcagtcaacaagatgactataaagatgaatgagtcggacattggtgtgtttgat
cagcgtatgaagacctggcagcgctggcaggatgcccagaccatgctacagaaaaaacgg
gaggtagaggcccgactactctgggcaaacaaacctgacaagctacagcaagccaaagac
gagatcactgagtgggaggggaaagttgcacagtacgagagagactttgaacgaatttct
gccagtgtccgcaaagaagttatccggtttgagaaagagaaaacaaaagactttaaaaat
cagattgtaaagtacctggagactcttctaaactcacagcaacagctcataaagtactgg
gaagccttcctgcctgaagcaaaagcaattgcataa

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