Latimeria chalumnae (coelacanth): 102361876
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Entry
102361876 CDS
T02913
Symbol
RLIM
Name
(RefSeq) ring finger protein, LIM domain interacting
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102361876 (RLIM)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102361876 (RLIM)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102361876 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
102361876
NCBI-ProteinID:
XP_005994976
Ensembl:
ENSLACG00000006779
LinkDB
All DBs
Position
Un
AA seq
619 aa
AA seq
DB search
MKWLETATVLRLQISVMENSDSADKGGNDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDY
RLMRDNNLLGTPGDVTEEELLRRLQQIKEGPPQQQQGDTENRGMDSSEDGSNGDSIIDWL
NSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNGGQQSTETEAQTESEQ
AMDTSNVEDVENNSQSDSESQRSESPPVRPSWRPAEAVERSAIEDFMSEDTAPRRGQRRG
RSRSPEHRRTRARTNRSRSPLNSVSEASPRPRRNRPSQSSDHSPVNEIEGSSRTRQHVPS
RQVLIANEVQEEAPAPEPDARDPPQSEGSTEPNGESSEAGRRPPTIMLDLQVRRVRPGEY
RQRDSIANRTRSRSQTPNNTVTYESERDGFRRTFSRSERAGVRTYVSTIRIPIRRISDTG
LSEATSVAIQTMLRQIMTGFGELSYFMDSDSDSDSSSRSQNRSAETTESPNGSDNSNVEN
VEVRTGEVNESGSETGSAPAGRRESRSGNRGPVSFEESGTLPFLRLAHFFLLNDDDDDQP
RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS
TCPICRRAVLVSSNRESVV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctggaaacggcgacggtattgagacttcaaatctccgtaatggaaaactca
gacagtgctgacaagggagggaatgatcagtcggaagctcaacgtcagagtcagttagac
cgtctggatcgggaagaagctttttatcaatttgtaaataacctgagtgaagaagactat
aggcttatgagggacaataatctgctgggtactccaggtgatgttactgaagaagaattg
ttgaggcgtctgcaacaaattaaagagggcccaccacagcagcaacagggtgatactgag
aaccgaggtatggattcctcagaagatggttctaatggagattccataatagattggctt
aactcagtgagacagactggcaataccactaggagtgggcaaagggggaatcagtcttgg
agagcagttagtagaactaatcccaatagtggagactttagatttagtttggaaattaat
gttaaccgcaacggtggacagcaaagcaccgaaacggaggcgcagacagaaagcgaacaa
gccatggacacttccaacgtagaggatgttgaaaataacagccaaagtgattctgaatct
cagagatcagagtctcctcctgtaagaccatcttggagacctgcagaagcagtagaaagg
agtgctattgaagattttatgagtgaggacacagctccacgtagaggtcagagaagagga
aggagcagaagccctgagcatcgaagaactcgagcaagaacaaataggagtcggtcaccg
ttaaactccgttagtgaagcttctcccagacctcgccgtaataggccttctcagagctct
gatcattccccagtaaatgagatagaaggaagctcaagaactagacaacatgtgccatcg
aggcaagttttaattgcaaatgaggtacaggaggaagctcccgctccagagccagatgca
agagatcctcctcagagtgaaggttccacagaacctaatggtgagtcttcagaagctgga
cgaagacctccaaccataatgcttgatcttcaggtaagacgagtgcgtcctggagaatac
cggcagagagacagcatagccaacagaactcgatctaggtcccagacaccaaacaacaca
gtcacttacgaaagcgaacgggatggttttaggcgcaccttctcccgttctgagcgagca
ggtgtgaggacatatgtcagcaccattcggattcccatacgaaggatctcagacacgggc
ctcagcgaagctacatcagtagctattcagaccatgctgaggcagataatgactgggttt
ggggaactgagctactttatggacagcgatagtgattcagactctagcagccgcagtcag
aatcgaagtgcagaaaccacagagtccccaaacggtagtgataattcaaatgtggaaaat
gtggaggttagaacaggagaggttaacgagagcggtagtgaaaccggttcagcacctgct
gggagaagagagtctcgcagtggcaatagaggcccagtcagctttgaagaaagtggtact
ttacctttccttaggttggctcacttcttccttttaaacgatgatgatgacgaccaaccg
agggggctcaccaaagaacagattgacaacttgtccacgaggaactttggggaaaacgat
gctcttaaaacctgcagcgtatgcattacggaatacacagaaggcaacaagctccgtaaa
cttccatgctcacatgagtaccacgttcactgcatcgatcgctggctttctgaaaattca
acttgtcctatttgccgtcgggctgttttagtctctagcaacagagaaagtgttgtctag
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integrated database retrieval system
