Latimeria chalumnae (coelacanth): 102362137
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Entry
102362137 CDS
T02913
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102362137 (NPAS1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102362137 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
102362137
NCBI-ProteinID:
XP_005996103
LinkDB
All DBs
Position
Un
AA seq
869 aa
AA seq
DB search
MIHHLHLQALRKEKSRNAARSRRGKENFEFFELAKMLPLPGAITSQLDKASIIRLTISYL
KMRDFANQGDPPWNVRAEGTPSSSTSVKALGAQGRRNSNPLISEIFEQHLGGHILQSLDG
FVLALNQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHIEMAEQLGMKPPGGRLS
VQPAKRNLAGSTASSPTDARETGTIPSASPLLLDTEGLERSFFIRMKSTLTKRGLHVKTS
GYKVIHVTGRLRPRLYPFSPARSASIQVMGMVALAHTLPPSTLSEVRIECHMFVFRVNMD
LQIVYCESRVSDYMDMSPADLIGKSCYHFVHGEDVEGIRHSHLDLLKKGQVVTKYYRWLQ
KAGGYIWLQSCATISVNVKNPSERNIVWVNYILSKPEYKNIPMDLSQLPASSIRVSDSGE
NSDLEQDFKERDISTDASKGSRYPEVKDLGSKGRRYLRSQSDERTSSLEDTTSESPEAKC
EKDYVEESEDEIRSDTENRFAPSGGKRIKLELRPEGGLDAGEKSLAPLRDVENSGSSSDE
DEEGAEAAGGCRNQKGCKREESGSPSLSKGLDSCRPRTAEFSSVIQSQASFHPQHHSALK
IKSEQTLPGGYDNGNSMWSFHSSREAPREALYTMNKALSAEKLNPRQAAAGLYVAIPDSV
LTPPEVDSGGSVPKAPFSTSPRAVAPAALADTLSPPLSGSPCEEKASSAPFAPVVYSSEM
EVLQRLHAGNMVLPLVHQIGAGLTAHNPMAGTSAPQGLYTTSTIRYAPADMTLAMQGNML
PASHALNLADINGSDSKSPMELMYHHIQRLNMVAPFGNVGGGSGGAGLAQVPGTGGGVFT
TAETLFSALPFSMNSSSIHSAPALERKEN
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgatccaccatcttcatttgcaggctctaagaaaggagaagtctcgcaacgctgcccgc
tcccgccgaggaaaggagaactttgagttttttgagctggcgaagatgctgcctctcccc
ggggccatcaccagccaactggacaaggcctccatcatccggctcaccatcagctacctg
aagatgcgggactttgccaaccagggcgaccctccctggaatgtccgggcagaaggaacc
ccttcctccagcacttctgttaaagcacttggagcccaggggaggagaaactccaaccct
ctgatttccgaaatcttcgagcaacacctgggaggccacatccttcagtccctcgatggc
ttcgtcttggcactaaatcaggagggcaggtttctttacatctccgagaccgtctccatt
tacctcgggctttcgcaggtggagctgacgggcagcagcgtcttcgattacattcacccg
ggtgaccacattgagatggcggagcaactcggcatgaagccgccaggaggaagactcagc
gtacaaccggccaaaaggaatcttgctggctccaccgcttcctccccaacagacgcacgt
gaaacaggtacgattccttctgccagccctctcctgctcgatactgaaggtttggaacgg
tcgttcttcatacgtatgaaatcaacgcttaccaagcgaggactacatgtcaagacgtct
ggatataaggttatacacgtgacgggacgtctgcggccgcgcctctaccccttctctccg
gcacgatcagcctcaatacaggtcatggggatggtggcactggcccacacactgcctccc
tccaccctcagcgaggtccgcatcgagtgccacatgtttgtgtttcgggtgaacatggac
ctgcagattgtctattgtgagagcagggtcagtgactacatggacatgtctcctgctgac
ttgattgggaaaagctgctaccattttgtccatggagaagacgtagaaggaatccgacac
agtcatctagacttgttgaagaaaggtcaggtcgtgacgaagtactatcgctggctccag
aaggcggggggatacatctggctccagtcctgtgctaccatctcagtgaatgtgaaaaac
cccagcgagaggaacatcgtctgggtcaactacatcctcagcaaacccgagtacaagaac
attccgatggacctgtctcagcttccagcgtcctccattagagtgtccgactccggcgag
aattccgacttggaacaggacttcaaggagagagacatctctacagatgccagcaaggga
agtcgctacccggaagttaaggatctggggtcaaagggcaggaggtacttgaggagccaa
tcagacgagaggacaagttccttggaggacacgacttcagagtctccggaggcgaagtgc
gagaaggactacgtggaagagtcagaggatgagatccggagcgacacggagaacaggttt
gcgccgtccggggggaaacgcatcaagctggagctgcggcccgaggggggcttggacgcc
ggcgagaagtcgctcgccccgctgcgcgacgtggagaactcagggagctccagcgacgag
gacgaggagggcgccgaggcggccggcggctgccgaaaccagaaagggtgcaagagggaa
gagagcggcagcccgagcctcagtaagggcttggactcttgtaggccccgcactgccgag
ttcagctccgtcatccagagccaggccagcttccatccccagcatcactcagcacttaaa
atcaagagcgagcagacgctgcctgggggttacgacaacggcaacagcatgtggagcttc
cattcctccagggaggcccccagagaggcactgtatactatgaacaaagcacttagcgca
gagaaactgaaccccaggcaggctgcggctggcctgtatgtagctattcccgactcggtg
ctgacccctccggaagtggacagcggcggcagtgttcccaaggctcccttcagcacctcg
cctcgggccgtggccccagcggctttggctgacaccttgtccccgccgctctcgggctcc
ccctgcgaggagaaggccagctctgccccctttgcgccggtggtgtactcgagcgagatg
gaagtgctccagagactccacgcgggcaacatggttttgccgctggtccaccagatcggg
gccggcctcaccgcccacaaccctatggccggcacctctgcgccgcaaggcctctacacc
accagcaccatccggtacgccccagcggacatgactctggccatgcagggcaacatgctt
ccagcttcccacgcgctcaacctggcggacatcaacggctcggactccaagtcacccatg
gaactcatgtaccaccacattcagagactcaacatggtggcgccctttggcaacgtgggt
ggcggcagcgggggcgccggactggcgcaggtgcctggcacgggcggcggggtcttcacc
acggcagagacgctcttttccgccctgccgttttccatgaacagtagcagcatccactcg
gcaccggcgttagagaggaaggaaaactga
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