KEGG   Latimeria chalumnae (coelacanth): 102362275
Entry
102362275         CDS       T02913                                 
Symbol
RRP9
Name
(RefSeq) ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
  KO
K14793  ribosomal RNA-processing protein 9
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcm03009]
    102362275 (RRP9)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    102362275 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_RFWD3 WDR54 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 102362275
NCBI-ProteinID: XP_005987145
Ensembl: ENSLACG00000017234
LinkDB
Position
Un
AA seq 502 aa
MGGINYNSRPMRESEGMNGRGYRAEFGSGVSVGWSMWVCWFVSLVEEREIGRGRMSSFFI
KKKGNLKAAKEKPGPGRKKAAVGDGKVSRKISAKLGEEISSDSETEISNLDRKRKAMDEE
IEETPQEKKLRLAKLYLEQLRQEEEEKVEEEEYERDLVAGRLQEEVLEQQGKLQRSIAKD
YQPFETKNIRVLRGHQLPVTCLVISPDDKYIFSAAKDCTIIKWDVESGKKVHTIRRGRKG
MEDKHVGHTAHVLCMAISSDGKYLATGDKNKLIMIWEAATCKHLYKFTGHKDAVSGLSFR
NGTHQLYSVSHDRSVKVWNVEENAYVETLFGHQDGITGLDSLSRERCVTAGGRDGTIRVW
KITEESQLVFRGHGGSIDCIQLINEENMISGADDGSVALWHVSKKKPLVTVKQAHGIHGD
KGLEQPYWISSVAALQNSDVVATGSHNSKVRLWRCGQGFRTLEPLFDVTVTGFVNSLKFS
SSGEFLVAGVGQEHRSGRWWRT
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgggcggaatcaattataacagcaggccaatgagagagagtgaggggatgaatgggcgc
ggctacagggctgagtttggtagcggtgtgagtgttggatggtccatgtgggtttgctgg
tttgtgtctctggtggaggaaagggagatcggacgcgggagaatgtcttccttttttatt
aagaagaaggggaacctcaaagcagctaaagagaagcctggtcctggcagaaagaaggct
gctgtcggagatggtaaagtcagtaggaagatcagtgccaagctgggcgaagagatctca
agtgactcagagacagaaatttccaatttagacaggaagcggaaagcgatggatgaagag
atcgaggagactccacaggagaagaagttgcggctagctaaactctacctggagcagctc
cgacaggaagaggaggagaaagttgaggaagaggagtatgagagagacctggtcgctggt
agactacaggaggaagtgctcgaacagcaaggaaaactgcagaggtcgatcgctaaagat
taccagccttttgaaactaaaaatattcgcgtgttacgaggacaccagctgcccgtcacc
tgcctggtcatctctcctgatgacaagtacatcttttccgctgcgaaggattgcaccatc
atcaaatgggatgtggagagtggaaagaaggtccatacgatacgaaggggcaggaagggg
atggaagataagcatgtcggccatacagcacatgtactctgtatggcaatctcttcagat
ggcaaatacctggccacaggagataagaacaagttgattatgatctgggaggcagcaacg
tgcaaacatctttacaagtttacgggacacaaggatgctgtttcaggtctgtccttcagg
aacggtacacaccagctgtacagtgtgtcacatgatcgctcggtgaaggtgtggaacgtt
gaggagaacgcctacgttgagacccttttcggtcaccaggatgggatcacagggttggac
agtctgagccgagagcgctgtgtgacggcgggtgggcgcgatgggacaattcgtgtctgg
aagattacggaggagtcccagcttgtctttcgcggtcatggtggctctattgactgcatt
cagctgattaatgaagagaacatgatctcgggggcagatgatgggtctgtagccctctgg
catgtgagtaaaaaaaagcccctagtgacagtgaagcaggcccatggtatccatggtgac
aagggcctagagcagccatattggatctcttcagtggccgcactgcagaacagtgatgtt
gtagctacaggctcccacaattccaaagtgcggctctggaggtgtggccaaggattccgg
acattggagcctctttttgacgtaactgtgactggatttgtcaatagcttgaagttttcc
agctctggagagtttctcgttgctggagtgggacaggaacacaggtcgggccgctggtgg
aggacttaa

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