Latimeria chalumnae (coelacanth): 102362404
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Entry
102362404 CDS
T02913
Symbol
DDX39A
Name
(RefSeq) DExD-box helicase 39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102362404 (DDX39A)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102362404 (DDX39A)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102362404 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102362404
NCBI-ProteinID:
XP_005995919
Ensembl:
ENSLACG00000015063
UniProt:
H3B5C3
LinkDB
All DBs
Position
Un
AA seq
426 aa
AA seq
DB search
MAEQDVENELLDYEEDDEPQTAPETQATAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD
CGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHT
RELAFQISKEYERFSKYMPMVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIRN
KSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKF
MQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA
LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVSELPDEIDIST
YIEQSR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaagacgttgaaaatgagctgttggattatgaggaggatgacgagccgcag
actgcgccagaaactcaggcgacagccaaaaaggatgtgaaagggtcatatgtttccatc
cacagctcagggttcagggacttcctcttgaaacctgagctcctcagggccattgtggac
tgtgggtttgaacatccctctgaagtccagcacgagtgtatcccccaggccattttgggc
atggatattttatgccaggccaagtctgggatgggaaagacagctgtctttgtgttggcg
actctgcagcagttggagccagtggatggacaggtgtctgtgcttgtaatgtgccacacc
agggagctggccttccagatcagcaaggagtatgagaggttctccaaatacatgccaatg
gttaaggcggctgtgtttttcggagggctgtcaataaagaaggacgaagatgtcttgaag
aagaactgcccacacattgtggtggggacgcccggccggatccttgcgctcatcaggaac
aagtccctcaacctcaagaatgtgaagcacttcgtactcgatgagtgtgacaagatgctg
gagcagcttgatatgcgaagagatgttcaggaaatcttccgtctcactccacacgagaag
cagtgcatgatgttcagtgccaccctgagcaaagaaatccggcctgtctgcagaaaattc
atgcaagatccaatggaagtgtttgtggatgatgaaacaaagttaactcttcacgggctg
cagcagtactatgtcaaactgaaagacagtgagaaaaaccgcaagctctttgacctcctt
gatgtgctggaattcaatcaggtggttatcttcgtcaagtcagtccagcggtgtatagct
ctggctcagctgctagtggaacaaaattttccagccattgcaattcacagagggatggca
caagaggagaggttatctcgttaccagcagttcaaagatttccagcgtcgtatattagtt
gctaccaatttatttggcagaggaatggacatagagcgcgtgaacattgtctttaactat
gacatgcctgaggactcggacacatacttgcacagggtggctcgagctggacggtttggc
acgaagggactggccatcacttttgtatcggatgagacggatgccaaaatcttaaatgac
gttcaggatcgatttgaagtgaacgtgtctgaactgcctgatgaaattgatatttccacc
tacattgaacagagtcggtga
DBGET
integrated database retrieval system
