Latimeria chalumnae (coelacanth): 102362421
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Entry
102362421 CDS
T02913
Symbol
SPTBN1
Name
(RefSeq) spectrin beta, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04517
IgSF CAM signaling
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102362421 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102362421 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcm04812
]
102362421 (SPTBN1)
Cytoskeleton proteins [BR:
lcm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102362421 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102362421 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
102362421
NCBI-ProteinID:
XP_006001605
Ensembl:
ENSLACG00000013725
UniProt:
H3B119
LinkDB
All DBs
Position
Un
AA seq
2278 aa
AA seq
DB search
MLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLT
LGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGM
AFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSI
ITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILN
NRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREG
KLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVS
QDNFGFDLAAVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAENYHDIKRITARKDNV
IRLWEYLLELLKARRQRLEMNLGLQKIFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVDDL
LQKHALVEADIAIQAERVRAVNASAQKFAGDGEGYKPCDPQVILDRVAHMEFCYQQLCQL
AAERRARLEESKRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSVLRLLSKHKAFEDE
MSGRSGHLQQTIKEGEGMIADDHFGSEKIKERVKDIQEQWAHLEQLSAIRKKHLEEASSL
HQFQADADDIDAWMLDILRIVSSNDVGHDEYSTQSLVKKHKDVAEEIASYRPTIDSLDEQ
AKILPEEYRKSQDVYSRVSGIEERYKEVAELARLRKQALQDALALYKMSSETDACELWID
EKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEI
KAQQDKLNTRWSQFRDLVDQKKDALSSALSIQNYHLECNETKSWIREKTKVIESTQELGN
DLAGVMALQRKLTGMERDLAAIEDKLNDLQKEAEKLEAEHPDQAQAIMSRLAEICDVWEE
MKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLTQHEG
IKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLS
QSHAFQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKIN
AVVETGRRLVSDGNIYSDKIQEKVDSIDDRHKKNREAASELLMRLKDNRDLQKFLQDCQE
LSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLEKIRKEGMQLIAEKPE
TETVVKEKLTALHQMWEKLESTTQIKAQHLFDANKAELFTQSCADLDKFLGGLESQLQSD
DYGKDLTSVSILLKKQQMLENQMEVRKKEVEELQTQAQALSQEGKDTDEVDSKRIIVQTR
FMELMEPLKERKNNLLASKEIHQFNRDVEDEILWVEERMPIATSTDHGHNLQTVQLLIKK
NQTLQKEIHGHQPRIDDIFERSQNIVTGGGSSSPSADAIRQRLADLQQLWNLLIEETEKR
HSRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVTMLKKHQILEQAVEDY
AETVHQLSKTSRTLVAAEHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLN
REVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNHMADE
LINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDK
HKKLPEELGRDQNTVEALQRIHTAFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQK
RENEVLEAWKVLLDACEGRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVS
SVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTDKRKEMID
KWEDRWEWLRLVLEVHQFSRDASVAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEK
SAATWDERFSALERLTTMELLEVRRRQEEEERKRKPPTPEPVAQVTEGTESPHLEGVKEG
EQISQNGLPSDQDSPRVTETVETSEMVNGATEQRTSSKEPSPVPSPTSDRKAKVSIQTQS
SATLPAKTQETPAQMEGFLHRKHEWETHSKKASNRSWHNVYCVINNQEMGFYKDSKNAAA
GIPYHSEIPVSLKEAVCEIAVDYKKKKHVFKLKLNDGNEYLFQAKDDEEMNAWIQAITSA
ISSEKTEVSPSSQSTPVSSRAQTLPASVVVSSESSPGKREKDKEKDKEKRFSLFGKKK
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaaactactcgaagtgctttcaggagaaagacttcccaaaccaactaaggga
agaatgcgcatccattgtctggagaatgttgacaaagccctacaattccttaaagagcag
agagtacacttagaaaacatgggttcacatgatattgtggatgggaaccacaggctgact
cttggtctcatttggaccattattctcaggttccagatccaggatatcagtgttgaaact
gaagacaataaggagaagaaatctgctaaggatgccttgctgttgtggtgccagatgaaa
actgctggttatcccaatgtcaacattcacaattttaccactagctggagagatggcatg
gctttcaatgcactgatacacaaacataggcctgacctgattgattttgataaactgaag
aaatctaatgcacactacaatctgcaaaatgcttttaatcttgcagaacaacaccttgga
cttaccaagcttctggacccagaagatatcagtgttgaccatcctgatgagaagtccatt
atcacctatgtggtgacctactaccactacttctctaagatgaaagctttggctgttgaa
ggaaaacgtattggaaaggtgcttgacaatgcaattgaaacagaaaagatgattgagaag
tatgagtccttggcttctgatttactggaatggattgaacagaccatcatcatcttgaac
aatcgtaaatttgctaattcattggttggtgtacaacagcagctgcaggcattcaacacc
taccgtactgttgagaagccacccaagtttacagagaaaggtaacctggaagtgctgctc
ttcactattcaaagcaagatgagagcaaataatcaaaaagtatatatgccaagagaaggc
aaactcatctcagatattaataaggcctgggaaagactggaaaaagctgaacatgagaga
gaactggcactgcgaaatgagctcattcgacaagaaaaactggaacaacttgcccgccga
tttgatcgcaaagcagccatgagagaaacatggctcagtgagaatcagcgccttgtttct
caggacaactttggatttgatctggcagctgtagaagctgcaactaaaaaacatgaagct
atagaaactgacatagcagcctatgaagaacgagttcaggcagtggttgctgtagccaag
gagcttgaagcagagaactaccacgatatcaaacgcatcactgcaaggaaggacaatgtc
attcgtctgtgggagtacctgttagagctactgaaagcccggagacagcggttagaaatg
aatcttggactacagaagatcttccaggaaatgctgtatatcatggactggatggacgaa
atgaagatgcttctgttgtcccaagactatggcaaacacttacttggtgtagatgatctg
ctgcaaaaacatgcactggttgaagcagatattgctattcaggctgaaagagtccgagct
gtcaatgcttctgctcagaaattcgctggtgatggagagggttacaaaccatgtgaccct
caggttattctggaccgtgtggctcatatggagttctgttaccaacaactatgccaactt
gcagcagagcgaagggctcgtctggaagaatccaaacgcctctggaagttcttctgggag
atggctgaagaggagggctggatcagggaaaaagagcagatcctctcatctgatgactat
ggcaaagacctaacaagtgtgcttcgtctccttagtaagcacaaggcatttgaagatgag
atgagtgggcgtagtggccatcttcagcagactataaaagaaggtgaaggcatgattgct
gatgaccactttgggtctgaaaagataaaggagagagttaaagatattcaagaacagtgg
gcccaccttgagcagctctctgctatcaggaagaagcaccttgaagaagcttccagtctt
caccagttccaggctgatgctgatgacattgatgcttggatgcttgacatcctgagaatt
gtctcgagcaatgatgttggccatgatgagtattccactcagtctttggtaaagaaacac
aaagatgtggctgaggagattgcaagctatagacccactattgactcccttgatgagcaa
gcaaagattctacctgaagaatatagaaagtctcaagatgtgtatagtagagtatctggc
attgaagaaagatacaaagaggttgctgaactggcacgactgcgtaagcaagctcttcag
gatgctcttgctttgtacaagatgtccagtgagacagatgcctgtgaactttggattgat
gaaaaggaacagtggctgaacaacatgcagattccagagaaactggaagacttagaggtt
atccagcacagattcgaaagtctagaaccggagatgaacaaccaagcttctcgtgttgct
gtggtgaaccaaattgcccgacagctgatgcacagtggacatccaagtgagaaagaaatc
aaagcacagcaagataaactcaacacaaggtggagccagttccgtgatttggttgaccag
aaaaaagatgccttaagctctgcccttagcattcagaactatcatcttgaatgcaatgaa
accaagtcctggattagagagaaaaccaaggtcattgagtccacacaagagttggggaat
gatttggctggagtcatggcccttcaaaggaagctaactggcatggaacgagatctggca
gccattgaagataaactaaatgatctgcagaaagaggcagaaaaactggaagcagaacat
cctgaccaggctcaagccattatgagccgtctagcagaaatatgtgatgtgtgggaagaa
atgaagactaccctgaagaaccgagaagagtcacttggtgaggctagcaagctacagcag
ttcttacgtgacctagatgatttccagtcctggctttcaaggactcagactgccattgcc
tctgaagatatgccaaataccctggcagaggctgagaagctacttacacagcatgagggc
attaagaatgaaataaacaactatgaagaagactaccaaaagatgcgtgacatgggggaa
atggtaactcaagggcaaacagatgcacagtacatgtttttacgccaacgcttacaggct
ttggacactggatggaatgagcttcacaaaatgtgggagaacaggcagaatctcctgtct
cagtcccatgcatttcagctgttccttagagataccaagcaggctgaagcattccttaac
aaccaggaatatgtactggcacacacagagatgcccactactctggaaggtgcagaggct
gcaattaaaaagcaggaggacttcatgaccactatggatgctaacgaagaaaaaatcaat
gcagtggtggagacgggcaggagactagtcagtgatggcaacatttactctgacaagatt
caagagaaagttgactcaattgatgacaggcataaaaagaatcgggaggcagccagtgaa
cttctgatgcgattaaaggataatagagacctgcagaagtttcttcaggactgccaggag
ctgtctctttggatcaatgaaaagatgcttacagctcaggatatgtcttacgatgaagca
agaaacctacacagcaaatggttaaagcatcaggcatttatggcagaactagcatctaac
aaagaatggttagagaaaattagaaaggagggaatgcagcttattgcagagaaaccagag
actgaaactgtagtgaaagagaagctgacggctctacatcagatgtgggagaaactggaa
tccacaacccagatcaaggcacaacatctctttgatgcaaataaagctgaactttttacc
cagagctgtgccgacttggataaatttcttggcgggctggaatcccaacttcagtctgat
gactatggtaaagatcttaccagcgtcagcatcctgctgaaaaaacaacagatgttggag
aaccagatggaagtgcgtaaaaaagaagtagaggaactgcaaacccaggctcaagctcta
agtcaggaaggcaaagatactgatgaggtggatagcaagcgcataattgtacagacacga
tttatggagttaatggaacccttgaaagagaggaagaacaacctactggcttctaaagaa
atccatcagttcaacagggatgtagaggatgagattttatgggttgaagaaagaatgcca
attgcaacatctacagatcatggccataaccttcagactgtgcagctattgatcaagaaa
aatcagactcttcagaaggaaatccatggccatcagccacgtattgatgacatctttgag
aggagtcagaatatcgttactggtggtggtagtagtagtcccagtgctgatgctataagg
cagagacttgcagatttgcagcagctttggaacctactgattgaggagactgagaaacgc
catagcagactggaagaatctcataaggcccaacaatactattttgatgctgcagaagct
gaggcctggatgagtgaacaggaactgtatatgatgtctgaggaaaaggccaaggatgag
cagagtgctgtgactatgttgaaaaagcatcagatattggaacaggcggtagaggactat
gctgagacagtgcatcagctgtcaaagaccagcagaactttggtagcagctgaacatcct
gagagtgaacgtattagtatgcgtcagtccaaggtggataagctgtatgcaggcctgaag
gatctggcagaggagagaagaggtaaactcgatgagcgacatcgcctcttccagctgaac
cgagaggtggatgatttggagcagtggattgcagaaagagaagtggtggctggatcccat
gaactaggacaggactatgaacatgttacaatgttacaagagcggttccgtgaatttgct
cgggacacaggtaacattggtcaggagcgtgtggatgctgttaaccatatggctgatgag
ctgatcaattctggacattctgatgctgccactattgctgaatggaaggatggtctaaat
gaggcctgggctgacctgctggagctcatagatacaagaacacagatcctggccgcctca
tatgaactgcacaaattctaccacgatgccaaggaaatttttgggcgtatccaggataag
cacaagaaactgccagaggagctgggtagagatcagaacacagttgaagcactgcagaga
atacatacagcatttgaacatgacattcaggcacttggtacccaggtgagacagctgcag
gaggatgcagcccgccttcaggctgcttatgctggtgacaaagctgatgatatccagaag
agagaaaatgaagtgttggaagcctggaaggtgctcctggatgcttgtgaaggcagacgg
gttagacttttggacacaggagacaagttcagattcttcagtatggttcgtgatcttatg
ctttggatggaagatgttattcgtcagattgaagcccaggaaaagccaagggatgtttca
tcagttgaattgcttatgaacaaccaccaaggtatcaaagccgaaattgatgcccgcaat
gatagtttcactacctgcattgagcttggcaaatccctactggcaaggaaacactatgcg
tcagaggagattaaagagaagttgttgcagctgactgacaagagaaaagaaatgattgac
aagtgggaagacagatgggaatggctcagactggttttggaagtgcaccagttttcaaga
gatgccagtgttgcagaagcctggttgctggggcaggagccttacctgtcaagtcgtgag
atgggtcagagtgtagatgaagttgagaaattgattaagaggcatgaagcatttgagaaa
tcagcagctacatgggatgagagattttctgcactggagagattaaccactatggaattg
ctggaagtacgtagaagacaagaagaggaagagagaaagaggaagccaccgactccggaa
ccagttgcacaggtcacagagggaacagagtcaccacacttggaaggggttaaagaaggt
gaacagatctcacagaatggtttgccatcagaccaggattccccacgggtgacagaaact
gttgaaacaagtgaaatggtaaatggtgccacagaacagcggaccagctcgaaagagcct
agtccagttccttccccaacttcagatcgcaaagccaaagtgtcgatacagacacagagt
tctgccactctcccagccaaaacacaagaaactcctgctcagatggagggcttccttcac
cgcaaacatgaatgggagacacacagcaaaaaggcatcgaacagatcttggcacaatgta
tactgtgtaataaacaaccaagagatgggcttttataaagattctaagaatgctgctgca
ggtattccataccatagcgagatacccgtcagcttgaaagaggcagtctgtgaaatagca
gtagattataagaagaaaaagcatgtctttaaactaaaactaaatgatggtaatgagtac
ctcttccaagccaaagatgatgaggaaatgaatgcctggattcaagctattacatcagcg
atctcctctgagaaaactgaggtgtcaccaagcagccagagcactccagtctccagccgt
gcacagaccttgccagccagcgtcgtcgtgagcagtgagtcaagccctggcaaacgagag
aaagacaaagaaaaagacaaagagaaacggttcagtctgtttggcaagaagaaatag
DBGET
integrated database retrieval system
