Latimeria chalumnae (coelacanth): 102362421
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Entry
102362421 CDS
T02913
Symbol
SPTBN1
Name
(RefSeq) spectrin beta, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102362421 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcm04812
]
102362421 (SPTBN1)
Cytoskeleton proteins [BR:
lcm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102362421 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102362421 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
102362421
NCBI-ProteinID:
XP_006001605
Ensembl:
ENSLACG00000013725
UniProt:
H3B119
LinkDB
All DBs
Position
Un
AA seq
2278 aa
AA seq
DB search
MLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLT
LGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGM
AFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSI
ITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILN
NRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREG
KLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVS
QDNFGFDLAAVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAENYHDIKRITARKDNV
IRLWEYLLELLKARRQRLEMNLGLQKIFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVDDL
LQKHALVEADIAIQAERVRAVNASAQKFAGDGEGYKPCDPQVILDRVAHMEFCYQQLCQL
AAERRARLEESKRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSVLRLLSKHKAFEDE
MSGRSGHLQQTIKEGEGMIADDHFGSEKIKERVKDIQEQWAHLEQLSAIRKKHLEEASSL
HQFQADADDIDAWMLDILRIVSSNDVGHDEYSTQSLVKKHKDVAEEIASYRPTIDSLDEQ
AKILPEEYRKSQDVYSRVSGIEERYKEVAELARLRKQALQDALALYKMSSETDACELWID
EKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEI
KAQQDKLNTRWSQFRDLVDQKKDALSSALSIQNYHLECNETKSWIREKTKVIESTQELGN
DLAGVMALQRKLTGMERDLAAIEDKLNDLQKEAEKLEAEHPDQAQAIMSRLAEICDVWEE
MKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLTQHEG
IKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLS
QSHAFQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKIN
AVVETGRRLVSDGNIYSDKIQEKVDSIDDRHKKNREAASELLMRLKDNRDLQKFLQDCQE
LSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLEKIRKEGMQLIAEKPE
TETVVKEKLTALHQMWEKLESTTQIKAQHLFDANKAELFTQSCADLDKFLGGLESQLQSD
DYGKDLTSVSILLKKQQMLENQMEVRKKEVEELQTQAQALSQEGKDTDEVDSKRIIVQTR
FMELMEPLKERKNNLLASKEIHQFNRDVEDEILWVEERMPIATSTDHGHNLQTVQLLIKK
NQTLQKEIHGHQPRIDDIFERSQNIVTGGGSSSPSADAIRQRLADLQQLWNLLIEETEKR
HSRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVTMLKKHQILEQAVEDY
AETVHQLSKTSRTLVAAEHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLN
REVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNHMADE
LINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDK
HKKLPEELGRDQNTVEALQRIHTAFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQK
RENEVLEAWKVLLDACEGRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVS
SVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTDKRKEMID
KWEDRWEWLRLVLEVHQFSRDASVAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEK
SAATWDERFSALERLTTMELLEVRRRQEEEERKRKPPTPEPVAQVTEGTESPHLEGVKEG
EQISQNGLPSDQDSPRVTETVETSEMVNGATEQRTSSKEPSPVPSPTSDRKAKVSIQTQS
SATLPAKTQETPAQMEGFLHRKHEWETHSKKASNRSWHNVYCVINNQEMGFYKDSKNAAA
GIPYHSEIPVSLKEAVCEIAVDYKKKKHVFKLKLNDGNEYLFQAKDDEEMNAWIQAITSA
ISSEKTEVSPSSQSTPVSSRAQTLPASVVVSSESSPGKREKDKEKDKEKRFSLFGKKK
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaaactactcgaagtgctttcaggagaaagacttcccaaaccaactaaggga
agaatgcgcatccattgtctggagaatgttgacaaagccctacaattccttaaagagcag
agagtacacttagaaaacatgggttcacatgatattgtggatgggaaccacaggctgact
cttggtctcatttggaccattattctcaggttccagatccaggatatcagtgttgaaact
gaagacaataaggagaagaaatctgctaaggatgccttgctgttgtggtgccagatgaaa
actgctggttatcccaatgtcaacattcacaattttaccactagctggagagatggcatg
gctttcaatgcactgatacacaaacataggcctgacctgattgattttgataaactgaag
aaatctaatgcacactacaatctgcaaaatgcttttaatcttgcagaacaacaccttgga
cttaccaagcttctggacccagaagatatcagtgttgaccatcctgatgagaagtccatt
atcacctatgtggtgacctactaccactacttctctaagatgaaagctttggctgttgaa
ggaaaacgtattggaaaggtgcttgacaatgcaattgaaacagaaaagatgattgagaag
tatgagtccttggcttctgatttactggaatggattgaacagaccatcatcatcttgaac
aatcgtaaatttgctaattcattggttggtgtacaacagcagctgcaggcattcaacacc
taccgtactgttgagaagccacccaagtttacagagaaaggtaacctggaagtgctgctc
ttcactattcaaagcaagatgagagcaaataatcaaaaagtatatatgccaagagaaggc
aaactcatctcagatattaataaggcctgggaaagactggaaaaagctgaacatgagaga
gaactggcactgcgaaatgagctcattcgacaagaaaaactggaacaacttgcccgccga
tttgatcgcaaagcagccatgagagaaacatggctcagtgagaatcagcgccttgtttct
caggacaactttggatttgatctggcagctgtagaagctgcaactaaaaaacatgaagct
atagaaactgacatagcagcctatgaagaacgagttcaggcagtggttgctgtagccaag
gagcttgaagcagagaactaccacgatatcaaacgcatcactgcaaggaaggacaatgtc
attcgtctgtgggagtacctgttagagctactgaaagcccggagacagcggttagaaatg
aatcttggactacagaagatcttccaggaaatgctgtatatcatggactggatggacgaa
atgaagatgcttctgttgtcccaagactatggcaaacacttacttggtgtagatgatctg
ctgcaaaaacatgcactggttgaagcagatattgctattcaggctgaaagagtccgagct
gtcaatgcttctgctcagaaattcgctggtgatggagagggttacaaaccatgtgaccct
caggttattctggaccgtgtggctcatatggagttctgttaccaacaactatgccaactt
gcagcagagcgaagggctcgtctggaagaatccaaacgcctctggaagttcttctgggag
atggctgaagaggagggctggatcagggaaaaagagcagatcctctcatctgatgactat
ggcaaagacctaacaagtgtgcttcgtctccttagtaagcacaaggcatttgaagatgag
atgagtgggcgtagtggccatcttcagcagactataaaagaaggtgaaggcatgattgct
gatgaccactttgggtctgaaaagataaaggagagagttaaagatattcaagaacagtgg
gcccaccttgagcagctctctgctatcaggaagaagcaccttgaagaagcttccagtctt
caccagttccaggctgatgctgatgacattgatgcttggatgcttgacatcctgagaatt
gtctcgagcaatgatgttggccatgatgagtattccactcagtctttggtaaagaaacac
aaagatgtggctgaggagattgcaagctatagacccactattgactcccttgatgagcaa
gcaaagattctacctgaagaatatagaaagtctcaagatgtgtatagtagagtatctggc
attgaagaaagatacaaagaggttgctgaactggcacgactgcgtaagcaagctcttcag
gatgctcttgctttgtacaagatgtccagtgagacagatgcctgtgaactttggattgat
gaaaaggaacagtggctgaacaacatgcagattccagagaaactggaagacttagaggtt
atccagcacagattcgaaagtctagaaccggagatgaacaaccaagcttctcgtgttgct
gtggtgaaccaaattgcccgacagctgatgcacagtggacatccaagtgagaaagaaatc
aaagcacagcaagataaactcaacacaaggtggagccagttccgtgatttggttgaccag
aaaaaagatgccttaagctctgcccttagcattcagaactatcatcttgaatgcaatgaa
accaagtcctggattagagagaaaaccaaggtcattgagtccacacaagagttggggaat
gatttggctggagtcatggcccttcaaaggaagctaactggcatggaacgagatctggca
gccattgaagataaactaaatgatctgcagaaagaggcagaaaaactggaagcagaacat
cctgaccaggctcaagccattatgagccgtctagcagaaatatgtgatgtgtgggaagaa
atgaagactaccctgaagaaccgagaagagtcacttggtgaggctagcaagctacagcag
ttcttacgtgacctagatgatttccagtcctggctttcaaggactcagactgccattgcc
tctgaagatatgccaaataccctggcagaggctgagaagctacttacacagcatgagggc
attaagaatgaaataaacaactatgaagaagactaccaaaagatgcgtgacatgggggaa
atggtaactcaagggcaaacagatgcacagtacatgtttttacgccaacgcttacaggct
ttggacactggatggaatgagcttcacaaaatgtgggagaacaggcagaatctcctgtct
cagtcccatgcatttcagctgttccttagagataccaagcaggctgaagcattccttaac
aaccaggaatatgtactggcacacacagagatgcccactactctggaaggtgcagaggct
gcaattaaaaagcaggaggacttcatgaccactatggatgctaacgaagaaaaaatcaat
gcagtggtggagacgggcaggagactagtcagtgatggcaacatttactctgacaagatt
caagagaaagttgactcaattgatgacaggcataaaaagaatcgggaggcagccagtgaa
cttctgatgcgattaaaggataatagagacctgcagaagtttcttcaggactgccaggag
ctgtctctttggatcaatgaaaagatgcttacagctcaggatatgtcttacgatgaagca
agaaacctacacagcaaatggttaaagcatcaggcatttatggcagaactagcatctaac
aaagaatggttagagaaaattagaaaggagggaatgcagcttattgcagagaaaccagag
actgaaactgtagtgaaagagaagctgacggctctacatcagatgtgggagaaactggaa
tccacaacccagatcaaggcacaacatctctttgatgcaaataaagctgaactttttacc
cagagctgtgccgacttggataaatttcttggcgggctggaatcccaacttcagtctgat
gactatggtaaagatcttaccagcgtcagcatcctgctgaaaaaacaacagatgttggag
aaccagatggaagtgcgtaaaaaagaagtagaggaactgcaaacccaggctcaagctcta
agtcaggaaggcaaagatactgatgaggtggatagcaagcgcataattgtacagacacga
tttatggagttaatggaacccttgaaagagaggaagaacaacctactggcttctaaagaa
atccatcagttcaacagggatgtagaggatgagattttatgggttgaagaaagaatgcca
attgcaacatctacagatcatggccataaccttcagactgtgcagctattgatcaagaaa
aatcagactcttcagaaggaaatccatggccatcagccacgtattgatgacatctttgag
aggagtcagaatatcgttactggtggtggtagtagtagtcccagtgctgatgctataagg
cagagacttgcagatttgcagcagctttggaacctactgattgaggagactgagaaacgc
catagcagactggaagaatctcataaggcccaacaatactattttgatgctgcagaagct
gaggcctggatgagtgaacaggaactgtatatgatgtctgaggaaaaggccaaggatgag
cagagtgctgtgactatgttgaaaaagcatcagatattggaacaggcggtagaggactat
gctgagacagtgcatcagctgtcaaagaccagcagaactttggtagcagctgaacatcct
gagagtgaacgtattagtatgcgtcagtccaaggtggataagctgtatgcaggcctgaag
gatctggcagaggagagaagaggtaaactcgatgagcgacatcgcctcttccagctgaac
cgagaggtggatgatttggagcagtggattgcagaaagagaagtggtggctggatcccat
gaactaggacaggactatgaacatgttacaatgttacaagagcggttccgtgaatttgct
cgggacacaggtaacattggtcaggagcgtgtggatgctgttaaccatatggctgatgag
ctgatcaattctggacattctgatgctgccactattgctgaatggaaggatggtctaaat
gaggcctgggctgacctgctggagctcatagatacaagaacacagatcctggccgcctca
tatgaactgcacaaattctaccacgatgccaaggaaatttttgggcgtatccaggataag
cacaagaaactgccagaggagctgggtagagatcagaacacagttgaagcactgcagaga
atacatacagcatttgaacatgacattcaggcacttggtacccaggtgagacagctgcag
gaggatgcagcccgccttcaggctgcttatgctggtgacaaagctgatgatatccagaag
agagaaaatgaagtgttggaagcctggaaggtgctcctggatgcttgtgaaggcagacgg
gttagacttttggacacaggagacaagttcagattcttcagtatggttcgtgatcttatg
ctttggatggaagatgttattcgtcagattgaagcccaggaaaagccaagggatgtttca
tcagttgaattgcttatgaacaaccaccaaggtatcaaagccgaaattgatgcccgcaat
gatagtttcactacctgcattgagcttggcaaatccctactggcaaggaaacactatgcg
tcagaggagattaaagagaagttgttgcagctgactgacaagagaaaagaaatgattgac
aagtgggaagacagatgggaatggctcagactggttttggaagtgcaccagttttcaaga
gatgccagtgttgcagaagcctggttgctggggcaggagccttacctgtcaagtcgtgag
atgggtcagagtgtagatgaagttgagaaattgattaagaggcatgaagcatttgagaaa
tcagcagctacatgggatgagagattttctgcactggagagattaaccactatggaattg
ctggaagtacgtagaagacaagaagaggaagagagaaagaggaagccaccgactccggaa
ccagttgcacaggtcacagagggaacagagtcaccacacttggaaggggttaaagaaggt
gaacagatctcacagaatggtttgccatcagaccaggattccccacgggtgacagaaact
gttgaaacaagtgaaatggtaaatggtgccacagaacagcggaccagctcgaaagagcct
agtccagttccttccccaacttcagatcgcaaagccaaagtgtcgatacagacacagagt
tctgccactctcccagccaaaacacaagaaactcctgctcagatggagggcttccttcac
cgcaaacatgaatgggagacacacagcaaaaaggcatcgaacagatcttggcacaatgta
tactgtgtaataaacaaccaagagatgggcttttataaagattctaagaatgctgctgca
ggtattccataccatagcgagatacccgtcagcttgaaagaggcagtctgtgaaatagca
gtagattataagaagaaaaagcatgtctttaaactaaaactaaatgatggtaatgagtac
ctcttccaagccaaagatgatgaggaaatgaatgcctggattcaagctattacatcagcg
atctcctctgagaaaactgaggtgtcaccaagcagccagagcactccagtctccagccgt
gcacagaccttgccagccagcgtcgtcgtgagcagtgagtcaagccctggcaaacgagag
aaagacaaagaaaaagacaaagagaaacggttcagtctgtttggcaagaagaaatag
DBGET
integrated database retrieval system
