Latimeria chalumnae (coelacanth): 102362717
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Entry
102362717 CDS
T02913
Symbol
TCOF1
Name
(RefSeq) treacle ribosome biogenesis factor 1
KO
K14562
Treacher Collins syndrome protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102362717 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcm03009
]
102362717 (TCOF1)
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
90S particles
Other 90S particles
102362717 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LisH
Motif
Other DBs
NCBI-GeneID:
102362717
NCBI-ProteinID:
XP_014351515
LinkDB
All DBs
Position
Un
AA seq
999 aa
AA seq
DB search
MSGNRKTPSKDAVLPFIYNYLLQRGYEKAARELRLQSTQKLLPVKSVSLEEIYTYWKKAS
ENSKKRKISKTAGESPSKRLCEADPTSSSEEEEEGPAFTQGGKAAPAGKSPAPSPPQKPV
ASDDSGEDSSDEESDSSGEVSGKTKAQVKRAGPSATRTPGPHAKGSPARTETASNLTTST
TKSAAPSKAAGKRPKSSEGKSSHSSGSEEEEGKAAVKTPSKPVTRTPASQAEGGSEEEGS
SEESDSEEDIKGKAAQAKSVSKAAPTKLPQAGKVAAKNTPATPLSAKTAQGGKVSTPAAA
KATPATPKQTKAAQGKVVTPAGPAKEKETSESESSDSSESEEEEEKATQKSVKQPVLGTC
KLNPHSGKATAVMKASPKKPSTPALNRAAGPASGQVKPAKPAGTGKKVDSSESESSESSE
SEEEEEKAKLAAKEPPKPALKHTSTSQMTSTKSSPSAAPKMKTAVPESSSEESSEESDSE
EEKKTIPQKLSTPKQPVPATPKAPLASPVLGKLSQVKLGPGKLFSPASSKAGQTSPSQTK
LGKVTTPAKTPVAGKKAESSESESSESSESEEAILQTSKPGALLKPSVSAPPKWPALELE
TSTESEDDDEPSQSLLGVAPSASGKNSVGTVSVSEMAAAKDSPLKSTAGKSAAPVPSKPA
PAKNVAASSATRTTPPAKHAGSAEEEAGSSGSHSSATSVEKKKKKKKSRLLKAVKTAAQT
PRQEKQKSLTSAEKSLTKHPTPVTKLQTQDNDTDKESSSDEEVNFALHVKQTGSPLKTPS
GNDEAGVKAAGKGSAVKETPTRKKAKLDSNAASRKSAATASQNGGSARPSRRAESVPQLL
ALAEASKTDSEDDGDEDTTTAAKTKAPAAIRTVTSKSSSDSEEEEEEEEERKRKRKTPGQ
KTPVPTSEQKTPKLKAKVGKKSKSAKKLKLEGEVSSDVNLPKTKKLKEKSHKSKKLKEKR
KKKQKEEMSLSHQAAEVTAEGEASSFLKLKEKKKKALKS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggaacaggaagaccccaagcaaggatgccgtgctgcctttcatctataactat
ctgttgcagcgtggctacgagaaggcggccagggagctgcggctacagagcacccagaaa
ctgctgcctgtaaagtcagtttctctggaggaaatttacacgtactggaaaaaagcgtca
gagaactcaaagaagaggaaaatcagcaagacggctggagagtctccttcgaagagactc
tgtgaggcggaccccacttccagctcggaggaagaggaggaaggaccggcatttactcaa
ggtggaaaagcagcgcctgctgggaaatctccagccccaagcccgcctcaaaagcccgtt
gccagcgacgacagtggggaagactcgagtgacgaggagtccgattcgtccggggaagta
tctggaaagacaaaagcccaggtgaagagagcggggccttctgcgacacggacgcctgga
cctcacgcgaaagggagcccggctcgaactgaaaccgcatcaaatctcactacttcgacg
actaagtctgccgccccttcaaaggctgcggggaagaggcccaagagctccgagggcaaa
agcagccattcttcggggagcgaggaagaagaggggaaagcggctgtgaaaacgccttcg
aaacctgtgaccaggaccccagcgtcccaagccgagggtggcagcgaggaggagggctcc
agtgaagagtcggattcagaggaagatattaaagggaaagcagctcaggcgaagtctgta
agtaaagctgcccccaccaaactcccacaggctggcaaagtagcggcgaagaatactccg
gcaacaccgctgtccgcgaaaactgcgcaagggggaaaggtttccactccagcggctgcc
aaagccacgcctgccaccccgaaacaaaccaaagcggcgcagggtaaggtcgtgacccct
gcaggacccgccaaggagaaggagacgtcggagagcgagagcagtgattcgtcagagagt
gaggaagaggaggagaaagcaacgcagaagtctgtgaagcagcctgtactcggcacgtgt
aagctgaacccgcattccgggaaggccactgctgtaatgaaagcttctccaaaaaagcct
tcaactccagccctcaacagagctgcagggcctgcttcaggccaggtcaagccggcaaag
cccgccgggacgggcaagaaggtggacagctcagagagtgaaagcagcgagtcgtcggaa
agtgaggaagaggaggagaaagcgaagctggcagccaaagagccgccaaaacccgccctg
aaacacaccagtacttcccagatgaccagtacaaaatcgagtccatctgcggccccgaaa
atgaagaccgctgtgccagagagcagcagtgaggaatccagcgaggagtcggactccgaa
gaggagaaaaagactatccctcagaaactttctacaccaaaacagccggttcctgcaacc
cccaaagctcccctggccagtccagtcctgggtaagctttcgcaggtgaaactgggcccg
gggaaactcttctctccggcctccagcaaagcagggcagacctctccgtcccagaccaag
ctgggtaaggtcacgaccccggcaaagacccctgtggcaggaaagaaagccgagagctcg
gaaagtgagagcagtgaatcttcagaaagtgaggaggcgatacttcagacgtcaaaacca
ggagcgctgttaaagccttcagtctccgcaccaccgaaatggcctgcactggagttggag
acttcgacagagtctgaagatgatgatgagccttcacagtctcttttaggagtcgctcct
tcagcgtcgggtaaaaactccgttgggaccgtcagcgtcagtgagatggctgcggcaaaa
gattcgccactgaagtcgactgcaggaaagagcgccgctcccgtcccctccaaacccgcg
ccagccaaaaacgtagccgcctccagcgcaacaaggaccaccccaccagcaaagcatgct
gggagtgcggaggaagaggccggcagctcaggcagccacagtagcgcaaccagcgtcgaa
aagaagaagaagaagaagaagagtcgtctgctgaaagcagtgaagacagcagctcaaacc
ccccggcaggagaagcagaaatccttaacctctgcggagaagagcctgaccaaacacccg
actcccgtgaccaaacttcagactcaagataatgacacagacaaggagtcctcgtcagat
gaggaagttaactttgcactccacgtcaagcagacgggcagcccgttgaagacgccgtca
gggaacgatgaggctggagtgaaggctgctgggaaaggatccgccgtgaaggagactccc
accagaaaaaaagcaaagctggactctaacgccgcctccagaaaaagcgccgctactgcg
tcccaaaatggcggcagtgcccgaccgtcccggcgggcagagtctgtgccgcagctgctg
gcgctggccgaagcctccaagacagacagcgaggatgacggcgatgaagataccacaacg
gcggccaaaacgaaagcgcctgccgccattagaacagtgacaagcaagtcgtcgtctgac
agcgaggaggaggaggaggaggaggaagagaggaagaggaaaaggaaaactccggggcaa
aagactccagtgccgacgtccgaacagaagaccccgaagctgaaggcaaaagtggggaag
aaaagtaaatcagcaaagaagttaaaactggagggtgaagtcagcagcgacgttaatcta
ccgaagaccaaaaagctgaaggagaaatcgcataaaagcaagaagttaaaagagaagaga
aagaagaagcagaaggaggagatgagtctgtcccaccaggctgctgaggttacggctgag
ggggaagccagctctttcctcaagctaaaggaaaagaagaagaaagccctgaagagctga
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