Latimeria chalumnae (coelacanth): 102362755
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Entry
102362755 CDS
T02913
Symbol
DDX5
Name
(RefSeq) DEAD-box helicase 5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102362755 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102362755 (DDX5)
03009 Ribosome biogenesis [BR:
lcm03009
]
102362755 (DDX5)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102362755 (DDX5)
Spliceosome [BR:
lcm03041
]
Complex A
U1 snRNP components
U1 related factors
102362755 (DDX5)
Complex B
102362755 (DDX5)
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
Pre-60S particles
Helicases
102362755 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
P68HR
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
102362755
NCBI-ProteinID:
XP_014342584
Ensembl:
ENSLACG00000015051
LinkDB
All DBs
Position
Un
AA seq
618 aa
AA seq
DB search
MPGYFNDRDRGRERGGFGGPRFGGSRGGPPTGRKYGNPGEKLMKRKWNLEELPKFEKNFY
QEHPDVTRRSMQEVELYRNSKEISVKGHGCPKPIVSFNEASFPTYVMDVIVRQNFTEPTA
IQAQGWPVALSGKDLVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTREL
AQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVH
INIGALELSANHNILQIVDVCQDLEKDDKLVRLMEEIMSEKENKTIVFVETKRRCDDLTR
RLRRDGWPAMGIHGDKSQQERDWVLDQFKHGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQATDLISVLREANQAINPKLLQMVEDRM
SGRSRGRGGMKDDRRDRYSGGKRGGFNGGFRDRENSERGYNSGPGKRDFNMKGQSGSYGG
SSYNNSGGGYGNGYGNSNMQSGYRSGNQSGSYQNGYQNSQPYGGSSHNSVHNGMNQNQQY
SYPPPPMIGYPLPPNYSQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgccagggtacttcaacgacagggaccgtgggagagaaagaggagggtttggtggacct
cgttttggtggtagtagaggtggaccacctactggaaggaagtatgggaatcctggcgag
aagctcatgaaacgaaaatggaatttagaggagctaccgaaatttgagaagaatttctac
caggaacaccctgatgtaactagacgatcaatgcaagaggttgagctataccggaacagc
aaagaaatcagtgtgaaaggtcatggttgcccaaagccaattgtatccttcaatgaagct
agttttccaacttatgttatggatgtcatcgtgcgacaaaatttcacagaaccaacagca
attcaggcgcagggttggcctgtggctttaagtggaaaagatttggttggagttgcacag
actgggtcgggcaaaactctttcatatttgttaccagctatagttcacataaatcatcaa
ccattcctggagcgtggagatggaccaatttgcctggtgctggcgccaaccagagaacta
gcccaacaagtacaacaagttgctgctgaatatggaagagcatctcgtttgaagtccacg
tgtatatatggaggtgctccaaaaggaccacaaatccgagacctagaaagaggtgtggaa
atctgcattgcaacacctggtagattaattgacttcttggaagctggaaagaccaatctc
aggagatgtacatatcttgttcttgatgaagcggatagaatgcttgacatgggttttgaa
ccacagattaggaaaattgtggaccaaattcggcctgacagacagacattaatgtggagt
gcaacttggcccaaagaagttcggcagttagcagaagacttcttgaaggagtatgtgcac
attaatattggagcgttagaactgagtgcaaatcacaacattttgcagattgtggatgtg
tgtcaagatctggagaaagatgataagcttgttcgattaatggaagagatcatgagtgaa
aaagaaaataagactatcgtctttgtggagaccaagagacgatgcgatgaccttacaaga
cgattaaggagagatggctggccagcaatgggaatccatggtgataagagtcagcaagag
cgtgattgggttcttgatcaattcaaacatggcaaagccccgatcctgattgccacagat
gttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaattatgactaccct
aactcctcagaggactatatccaccgcattggacgaactgcccgtagtagcaaaacgggc
actgcttacacctttttcactcctggtaacataaagcaagcaactgacctcatctctgtg
cttcgtgaagccaatcaggcaataaaccccaagctgcttcagatggtggaagacagaatg
tcaggtcgttcacgaggtagaggtggtatgaaggatgatcgccgggacagatactctggt
ggcaagaggggtggatttaatggtggttttagggatcgtgagaattcagaaaggggctac
aacagtggaccaggaaaacgggactttaatatgaagggtcagagtggatcctatgggggc
tcaagctacaataacagtggtggtggctatgggaatggctatggaaactctaatatgcag
tctggttataggtcaggaaaccagagtggttcgtatcaaaatgggtaccagaacagccaa
ccatatggaggcagcagtcacaacagtgtacacaatggtatgaatcagaatcagcagtat
tcatacccaccaccacctatgattgggtacccacttcctccaaattattcccagtaa
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