Latimeria chalumnae (coelacanth): 102362819
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Entry
102362819 CDS
T02913
Symbol
TRIM16
Name
(RefSeq) tripartite motif containing 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102362819 (TRIM16)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102362819 (TRIM16)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102362819 (TRIM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_2
zf-RING_6
DUF5340
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102362819
NCBI-ProteinID:
XP_005989366
LinkDB
All DBs
Position
Un
AA seq
1156 aa
AA seq
DB search
MAGSTAPAFDEQLQCSVCLAVLTCPVTIPCGHNFCKPCIQECWEKTDSGKGCHCPKCRQK
FNPRVIMKQNIALSALLEQFAQNDLLEEERKPEEALASLEEDREEEEYEPCDYCFDTKER
AVKSCLTCMVSYCEAHLRPHIENSKFQNHRLIDPVRDVEQGMCEIHKNLLELFCQTDQET
ICVECAAEEHSGHHILSVAKARREKESELQQTKSELECKILAVENSVNKLQANIKSITNS
VSEAQVNIVKQFIELTEAVQKAQKDVLEVLESEERAALNQADSIRTHLEQKCSKLRKAQD
QMEKLTQNRNTAHFLQEYCKWKKGALDDTLPSVYIGLKDRLSHFLRVVSESSESLVQRLQ
VTFKEKVTECMKEEECGILTMVSAVFPDTHCMSAPEPKTRSDFLQYATVLMFNPDTAHRY
LRLKADSSKITNTSPWQQPYPDHRDRFEEWRQVLCTESLYMGRYYFEVDIKGEGTYVGMT
YKSIDRKGSESNSCISGNDFSWCLKWKGKDFSAWHSDVETSLKTGKFNRIGVYLDYPRGT
LSFYGIMDAMTHIYTFNARFTEPLYPAFWLSKKENSVSFVVLGMEDTPVAQIPESKTASS
ISESATSTSVVGTAFVVSSDLALTQRTNTDTSVSVPISLTLTAASTLPTATFPVSTADPL
VCTAASTVTISSVSKPATPVTPAITTSETPVSSAALAVPTSETPVSSTSPVSKSENPVST
VSPSVLTAATSVSTSKTPISIASPSISTANMSVSTVGTAVSIASHISTGNNSVSTSTTKV
STTVFPVSADTSSMSTAVPSVSAPGCPDSLVVSALSSAVSLTAPSLGTSAAASSISSPAS
LITTSALSVPTLTNLVTLAAASVHTPGALVASTDLSTPPPTSTISTGDPSTPPPASTIST
GDPPTPPPASTISTGDPPTPPPASTISTGDPPTPPPSSTISTGDPSTPPPASTISTGDPS
TPPPASIISTADNVVNPTDSSAPPPASTISATETSVPTALVTISTADNAVYPADPSAPPP
ASTISVTEVSVPIPVSAISTDAHSVPTPVPSVSLPSSLVFTYASPPSSPVSTYMSPMSTP
PASTYVSPCSSPGVLTPLSTSMPAFPVSTDSAMISLSPSSISAPPSPVSRAVHSASTAAV
DLPLLQKLIDSLETSS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggccggctccacagctccagcgtttgacgagcagcttcagtgttctgtttgcctggcc
gtcctcacctgccccgtcaccataccctgtgggcacaacttttgcaagccctgcatccaa
gaatgttgggagaaaacggactccggcaagggctgccactgccccaagtgccggcagaaa
tttaaccctagagttattatgaagcagaacattgctctgagcgccttgttggagcagttt
gcccaaaacgacctgctggaggaagagaggaagcctgaggaagcactggccagcttggag
gaggacagggaggaggaggagtatgagccctgtgattattgtttcgacaccaaggagcgc
gcagtcaagtcctgcctgacctgcatggtttcctactgcgaggcccacctgaggcctcac
atcgagaacagcaagttccagaaccaccggttgatagacccggtcagggacgttgagcag
gggatgtgtgagatccacaagaacctcctggagctgttctgtcagacggaccaggagacc
atctgtgtggaatgtgctgcggaggagcacagcggacaccacatcctctctgttgccaaa
gcccggagagaaaaagagagtgaacttcagcagaccaaatccgagctggagtgcaagatt
ctggcagtagaaaactctgttaacaaactgcaggccaacatcaagtctataacaaattcg
gtgtcagaggcccaagtgaacattgtaaagcagtttatcgaattgacagaggctgtacag
aaggcccaaaaggacgtgctagaggtcttggagagtgaggagcgtgccgcgctgaaccag
gccgacagcatcaggacgcacctggagcagaagtgcagcaagctgaggaaagcccaggat
cagatggagaaattgacccagaacagaaatacagcccacttcctccaggagtactgtaag
tggaagaagggcgccctggatgacaccctgccgagtgtgtacattggactgaaagatagg
ctctcgcatttcctcagggtggtgtctgaatcctcggagtcgcttgtccagaggttacag
gtcacctttaaggagaaggtgaccgaatgtatgaaagaagaagaatgtgggattctaacg
atggtctctgcagtgtttccagacacgcactgcatgtcagctccagagccgaagactaga
agtgacttccttcagtatgccactgttttgatgttcaaccctgacacagcccatcggtat
ctccggctgaaggcagatagcagcaagataaccaacaccagcccttggcagcaaccctac
ccggatcaccgggacaggtttgaggaatggcgccaagtgttatgtactgagagtttgtac
atgggccgctattactttgaggttgatatcaaaggggaggggacctacgttggaatgacc
tacaaaagcattgacagaaagggctcggaaagcaacagctgtatatctggcaatgacttc
tcttggtgtttgaagtggaaaggcaaagatttctcagcctggcatagtgatgttgaaact
tccctgaaaactggaaaatttaaccgaataggggtctacttagactatccaagaggaaca
ttgtcattttatggaatcatggatgcaatgacacatatatacactttcaacgctaggttt
actgaaccactctacccagccttctggctctcaaaaaaggaaaactcagtctcttttgtg
gtactaggaatggaggatacacctgtggctcaaatacctgaatcaaaaactgccagttcc
atctcagaaagtgccacttctacatcagtggtgggaactgcttttgtggtctcatctgac
cttgcacttactcagagaacgaatactgatacatctgtctctgttcccatctctctcacc
cttacagcagcttctactctccctacagccacctttccagtatctacagctgaccctctg
gtctgtacagctgcatctacggttactatatcttctgtctcaaaacctgcgactccagtt
actcctgctatcactacatctgagacaccagtttcttcagctgctcttgctgtccctaca
tctgagacaccagtttcttcaacttctcctgtttctaaatctgagaatcctgtctctaca
gtttctccttctgtccttacagctgctacttctgtctctacatctaagaccccaatctct
atagcttctccttctatctctacagctaatatgtcagtctctacagttgggacggcagtc
tctatagcttctcatatctctacaggtaataattctgtctctacatctactactaaagtt
tctacaactgtttttccagtctctgcagatactagttctatgtctacagctgttccctct
gtctctgcacctggctgtccagattctcttgtggtctctgcactttcctctgcggtctct
ctaactgctccttccctaggtacatcagcagctgcttcttccatctcctcacctgcttct
ctgatcactacatctgctctttctgtccctacacttaccaatttggtcaccctggctgct
gcttctgtccatacacctggtgctctggttgcttcaactgatctgtctacccctccacct
acctctaccatttctacaggtgatccatctacccctccacctgcctctaccatttctaca
ggtgatccacctacccctccacctgcctccaccatttctacaggtgatccacctacccct
ccacctgcctctaccatttctacaggtgatccacctacccctccaccttcctccaccatt
tctacaggtgatccatctacccctccacctgcctctaccatttctacaggtgatccatct
actcctccacctgcctctatcatttctacagctgataatgtagtcaatccaactgattcc
tctgcccctccacctgcctctaccatttctgcaactgaaacttctgttcctacagctctt
gttaccatttctacagctgataatgcagtctatccagctgatccctctgcccctccacct
gcctccaccatttctgtgactgaagtttctgttcctattcctgtctctgccatttctaca
gatgctcattctgtcccaacacctgtgccttccgtgtctctaccttcttctctggtcttt
acatatgcatctccaccttcctctccagtttccacatatatgtctcctatgtctacacct
ccagcctctacatatgtgtctccatgttcctctccaggtgttctaacacctctttcaact
tcaatgcctgcctttccagtctctacggatagtgccatgatctctctgtcaccgtcttcc
atctccgcacctccttctccagtctccagagctgtccattcagcctctacagctgcagta
gatcttccgttacttcagaagttgattgattcacttgaaacatccagctga
DBGET
integrated database retrieval system
