Latimeria chalumnae (coelacanth): 102363171
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Entry
102363171 CDS
T02913
Symbol
LRFN4
Name
(RefSeq) leucine rich repeat and fibronectin type III domain containing 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102363171 (LRFN4)
04990 Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
102363171 (LRFN4)
Cell adhesion molecules [BR:
lcm04515
]
Immunoglobulin superfamily
SALM family
102363171 (LRFN4)
Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102363171 (LRFN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
ig
LRR_4
LRR_5
Ig_2
fn3
LRRCT
V-set
LRR_9
Ig_C17orf99
MSMEG_3727_PQQ-assoc
Motif
Other DBs
NCBI-GeneID:
102363171
NCBI-ProteinID:
XP_005988950
Ensembl:
ENSLACG00000018597
UniProt:
H3BGZ7
LinkDB
All DBs
Position
Un
AA seq
742 aa
AA seq
DB search
MEKLFLGFLLVGGIAVTTKACPFHCVCQNLSESLSTLCANKGLLFVPPNIDRRTVELRLT
DNFLRTVKQEDFLNMTGLVDLTLSRNTINIIEPFSFGDLESLRSLHLDSNRLTEIQDDYL
QGMVNLQHLIINNNQLINISEAAFDDFLMTLEDLDLSYNNLQSVPWGAIQDMICLHTLNL
DHNLLDYIMDGTFAEMYQLSRLDMTSNRLYTLPPDPLFARSQMGVISPTPYTATIVLNFG
GNPLHCNCELLWLRRLVREDDMETCASPSHLAGRYFWSIPEEEFTCEPPLITRHTHKLWI
LEGQRATMRCRAIGDPEPVIHWVSPDDKIISNSSRTTSYKNGTLNILVTTIRDDGTYTCI
AMNAAGESTALVDLKIIPLPHRTNGTVNILLQDPGSSDITTSARTAINSTDEGRGQERTV
VVTDVTSTSALIRWVTNKSFVVWMYQIQYNCTVDETLVYRILPSTSKSFFLKNLVSGVDY
DLCVLAIYDDTATSLPATKLTGCVQFSTKEDYPHCHSLHAHFLGGTLTVIVGGIIVVSLL
VFTVAMMVKYKICSSSHPSIPKVTDVYSQTNGNQLLPNGMLPPKNNRVASSKGQTTDGGK
PSGTPASQQQQTATPHGRAQAAKPPRKKAKSKHRNKAEEAADPFPTLGAKTCGKGSPERH
PSQDRASSLDWDLGAPKTKRSCSLDMGDISTETCYSYAKRLSVIWTKRSHSVHGMLTHCA
ESEFKSKRVTFSSADELEESVV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctcttcttgggtttcctgctggtaggaggaatagcagtgacaaccaaagcc
tgcccattccactgtgtttgccaaaacctctcggagtctctcagcaccctctgtgccaac
aagggactcctcttcgttccaccaaacattgatcgtcgaacagtggagctacgcctgacc
gacaacttcctccggaccgtcaagcaagaagacttcctcaacatgactggcctggtggac
ctcaccctgtccaggaataccatcaacatcattgagcccttctcgtttggagatctggag
agccttcgttcattgcacttggacagcaaccgcttgactgagatccaggacgactaccta
caagggatggtcaaccttcagcacctaataatcaacaacaaccagctcatcaacatctca
gaagctgcttttgatgactttttgatgactctagaagacctggatctgtcttacaacaac
ttgcaaagcgtcccgtggggggcaattcaggacatgatttgccttcacacgctgaacctg
gatcataacctcctagactacatcatggacgggacttttgcagagatgtatcaactttcc
aggttggacatgacttcgaacagattgtacacgctacctcctgacccgctctttgctcgg
tcgcaaatgggcgtcataagccctaccccttacacagccaccatagtgctcaatttcgga
gggaacccccttcactgtaactgtgaactcttgtggctgcgacgccttgtcagggaggat
gacatggagacttgtgcctccccttcccacttggcaggacgctatttttggtctatccca
gaggaggaattcacctgtgagccaccactgattacaagacacacccataaactttggatt
ttggaaggtcaaagggcaacaatgcggtgccgggcaataggagacccagaaccagtcatt
cactgggtatcgccggacgataaaattatttccaattcatccaggactacttcctataag
aacggcactttgaatatcctggtgaccacgatacgggacgatggaacctacacttgcatc
gcaatgaacgcagctggggagtcgactgccttagtagatctaaaaattattccgctcccc
caccggaccaatgggacggttaatatcttgcttcaagacccaggctcctcagatattaca
acgtccgccaggaccgcaataaacagcaccgatgagggcagaggccaggagaggactgtg
gtggtcaccgacgtgacttccacatcagcactgatccgatgggtcacaaacaagtccttt
gttgtgtggatgtatcagatacagtacaactgcacagtggatgaaaccctggtgtacaga
atccttccttccacgagtaaaagctttttcctgaagaacctagtttccggggtggactat
gacctctgtgtcctggccatctacgacgacacagcgacgtccctgccagcgaccaagctg
acgggctgcgtccagttctccaccaaggaagactacccgcactgccactctctccacgcc
cacttcctggggggcacgctgacggtgatcgtgggaggcatcatcgtggtgtcgctgctg
gtgttcacggtggcgatgatggtcaaatacaagatctgcagcagctcgcaccccagcata
ccgaaagtgaccgacgtctactcccagaccaacggcaaccaactgcttcccaacggcatg
ctgccaccaaagaacaatagggtcgccagctctaaggggcaaacgactgatgggggcaag
ccaagcggcaccccggcttctcaacagcagcagacggcgacgccgcatggcagggcacag
gccgcaaagccgccaaggaaaaaagccaaatccaaacatcggaacaaagcggaggaagct
gcggacccgttcccaacattaggtgccaagacttgtgggaagggaagcccagaaaggcac
cccagccaggaccgggcctcgtccttggactgggacctgggggcgcccaagacaaagcgc
agctgctcactggacatgggtgacatctcaaccgagacctgctacagttacgcaaagagg
cttagcgtcatctggactaaaaggagccattccgtgcacgggatgctcacgcactgcgcg
gagagcgagtttaaaagcaagagggtcacgttttccagcgcagacgaactcgaagagagc
gtggtataa
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