KEGG   Latimeria chalumnae (coelacanth): 102363194
Entry
102363194         CDS       T02913                                 
Name
(RefSeq) roquin-2-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcm03000]
    102363194
   04121 Ubiquitin system [BR:lcm04121]
    102363194
Transcription factors [BR:lcm03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    102363194
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102363194
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_4 zf_CCCH_4
Other DBs
NCBI-GeneID: 102363194
NCBI-ProteinID: XP_006014212
LinkDB
Position
Un
AA seq 514 aa
LQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAAAPTWEQLENAMVA
VKTVVHGLVDFIQNYSKKGHEAPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEEL
EKYRLRNKKISPPVRPFTLSNKIGLNGVIATTTGSIIPVIEPTGKMAQNSNGIVSTESSP
PQLIPRCTDILVSLDNVNKVVKVLPSGLSSSGSLSESPPENKIGSPPKTPVTQVSAASTV
PPSIGVDVNSVPPKTGQFASRVPVYPSQHSENVQYYQEPRAPLSYELQQYPQTSGYYPPT
PTVQAGVTPCVPRYIRSSNVPESNVPQSTVPYADPCSAYPSRDRLTTSPYPPPPPQQYAP
VPTVHSGIYAPVYDSRRIWRPQMYPRDDVMRSNSLPPMDVVHSSIYQTPLRERYSSLDGC
YSVAGQPPNEQRPMPVARDPYNRAQPGYEDLLRRKPDQWADYHNQKPPLTSSAVLPSAQS
PTSPSPLFSMDFNTEFTENASNLVVNKFEEDHIS
NT seq 1543 nt   +upstreamnt  +downstreamnt
cttcagtccccagaatcgtttgcaaagagtgtccaagaactgacgattgtcctgcagagg
acgggagatccagctaatctaaaccgattaaggccccacctagagcttcttgcaaatata
gaccctaacccagatgctgcagctcctacatgggaacagttagaaaatgcaatggtggct
gtgaagactgtggtgcatggactggtggattttatccagaactatagcaaaaaaggccat
gaggcaccacagccacagccaaacagcaaatacaaaactagcatgtgcagagatttgcga
caacaaggaggatgcccacgtggaacgaattgcacatttgctcattctcaggaagagctg
gaaaaatatcggttgaggaacaaaaagatcagccctcctgtgaggccttttactctctca
aataaaattggactgaatggtgtaattgctaccacaacaggaagtatcattcctgtaata
gaacctacagggaagatggcacagaattcaaatgggatagttagtactgagagcagtcct
ccacaattgattccacgctgtacagatatactagtttctctggacaatgtaaataaagtg
gtaaaggttttacccagtggtttgagctcatcgggttccctctcagaatccccaccggag
aataaaattggttcaccacctaagactcctgtaactcaagtgtcagctgcctcaacagtt
ccacccagtattggagtagatgtcaattctgtacctcctaaaactggccagtttgcatcc
agggtacctgtgtacccttcccaacattctgaaaacgttcagtattatcaggagcccagg
gcaccactatcttatgaattacagcagtacccacagaccagtggttactaccctccaact
cctactgtacaagcaggtgttactccctgtgttcctcgctatatacgttccagtaatgtt
ccagagtccaatgttccacagtctactgtaccatatgctgatccttgcagtgcatatcca
tctcgggaccgtcttacaacatctccttatccaccacccccacctcagcagtatgcacca
gttcctacagtgcactctggaatatatgcaccagtctatgatagcaggcgtatttggcgg
ccacagatgtatccaagagatgatgtgatgagaagcaattccttgcctccaatggatgta
gtgcactcatctatttaccagaccccacttagagagagatatagctcacttgatggatgt
tactctgtggctggacagccaccaaatgagcagaggcctatgcctgtagctagggatccc
tataatcgagctcagcctggttatgaagacctcttgagacggaagccagaccagtgggca
gattaccataatcagaaaccaccactcacttcctcagctgttcttccgtctgcacagtcc
ccaacatccccatctcctctctttagtatggattttaatacagagttcacagaaaatgca
agtaatttggtggttaataaattcgaggaagatcacatttcgc

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