Latimeria chalumnae (coelacanth): 102363350
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Entry
102363350 CDS
T02913
Symbol
PRDM16
Name
(RefSeq) PR/SET domain 16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00310
Lysine degradation
lcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102363350 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102363350 (PRDM16)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102363350 (PRDM16)
Enzymes [BR:
lcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
102363350 (PRDM16)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102363350 (PRDM16)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102363350 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
zf-H2C2_5
Zap1_zf1
DUF7128
zf-BED
C2CH-4th_BIRD-IDD
APC5_TPR
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
102363350
NCBI-ProteinID:
XP_005986093
LinkDB
All DBs
Position
Un
AA seq
1274 aa
AA seq
DB search
MRSKARARKLAKSDSEVANNMYETDPDHPAGESAEEETEDSIMSPIPGGHPSPLHTSEDF
TPKEGSPYEAPVYIPDDIPIPSDFELRESSIPGAGLGIWAKKKVEVGERFGPYTGVQRTP
LKDSNFGWEQLLNDSEVPSQEGCIRKIVDELGNEKFCIDASPAGTGNWLKYIRVARCYDE
QNLTACQVNDQIYYKVIKDIEAGEELLVYVKDGSYPDGSMPPNLDEEQTFRCEDCEELFQ
SKLDLRRHQKYACGNANTIFETLNEEINKKQLDGEEVHECKDCERMFPNKYSLEQHMIIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCIKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYAPGSMFTSGMPLTPSSMMDKSKSTPNLNHTGL
GFSDYFPSRPHHAGLPFSPTPQSFPALAPGFPGIFPPSLYSRPPLLPPSPLLKSPLNHNQ
DTKLPSPLGTSAMPLVSVANNNSGSNNNRMQHSGERSEIISDSSFTEKAKAKGSDLSDAS
DFEDVNTTTGTDLETTTGTGSELDSDAESDRDKNKEKNKHLESKQENINSLIPTSSNNSF
ERPFSSSQHSFFPPPDEQLFPSVGAASDSIKAIASIAEKYFGPGFMGMQEKKTGPLPYHS
MFPFQFLPNFPHSLYPFTDRTLNANLLVKAEPKSPRDVQKIGSTSSETPFDLTTKPKEMK
PAFLTPKVTSAPFLGEEQPLDLSISNRSRASHNGAAEPRRNHVYGDRKTVVSEELPKVPQ
SHPPQQPSLHYAKPSPFFMDPIYSRVEKRKLMDPVSTLKEKYLRPNPLLFHPQMSAIETM
TEKLESFRALKPDTTSVLQPLTHHPFNFRSPPPTLSDSILRKGKERYTCRYCGKIFPRSA
NLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLD
RHLKKHEHENVPVSQHSGVISNHLGTSASSPNSEPDSHALLDEKEDSYFSEIRNFIANNE
LNQASSLTDKRPEIQDGNNSQSHGLPNQKSVDMDDEEEEELEEEEEEDSSLTEKSQGEVV
SPTTEARGTFEEEDEEEEEATSLTMSYNHTRRCIEEEEVGLLDLEPIPNFGKGLDLRKAA
DEPFEVKDVFNSTLDSEAIKESLYRQAKTQAYAMMLSLSENNSLHTSSQNSLDAWLNMAG
AASDSGTFNPINHI
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcaagggcgagaaaactggccaaaagtgacagtgaggtagcaaataac
atgtatgagacagacccagatcaccctgctggggagagtgcagaagaagaaaccgaagac
agcatcatgtccccgattcctggaggacacccttcacccctccacaccagtgaggatttc
acacccaaggaaggctccccttatgaagctcctgtatacattcctgatgacattccaatc
ccatcagactttgaactccgagagtcctccatcccaggggcaggattgggaatctgggct
aaaaagaaggttgaagttggcgaaaggtttggaccttacactggagtacagaggacccca
ttaaaagactcaaactttggatgggagcaactgctgaatgattctgaggtgccgtcacag
gagggctgcatcagaaagatcgttgatgagcttggaaatgaaaagttttgcattgatgcc
agcccggctggaactgggaattggctcaagtacatccgagtggctcgttgctacgatgag
caaaatctaactgcttgccaggttaatgatcagatttattataaagttattaaagatata
gaagcgggtgaggagttgctggtttatgtgaaggacggctcttatcctgatgggagcatg
ccccctaatcttgacgaggagcaaacctttcgctgtgaagactgtgaagaattgttccag
tcaaagctggacctgaggaggcatcagaaatatgcctgtggcaatgccaacaccatcttt
gagacactgaatgaagaaattaacaagaagcagctagatggtgaggaggttcatgagtgc
aaagactgtgagcggatgttccctaataaatacagcctggaacaacatatgatcatccat
acagaggaacgagagtacaagtgtgaccagtgtccaaaagcctttaactggaagtcaaat
ttgattcgtcatcagatgtcacatgacagtggcaagcgcttcgagtgtgagaattgcatt
aaggtattcacagaccccagcaacctccagcggcacatccggtcccagcacgtcggcgct
cgggcccacgcctgccccgactgcggcaaaacctttgccacctcgtccggcctcaaacaa
cacaagcacattcacagcactgtcaagccttttatatgtgaggtctgtcataagtcctac
acgcagttttccaacctgtgccgtcacaagcggatgcatgcagattgccgcacacagatc
aaatgtaaggactgtgggcaaatgttcagcactacctcctccctcaacaaacaccggcgc
ttctgtgaaggcaaaaatcattatgcccccgggagcatgtttacctcggggatgccccta
acaccaagcagcatgatggacaaatcaaaatcgacacccaatctgaaccacaccggctta
ggatttagtgattatttcccctccaggcctcatcatgcaggtcttccattttcacccact
ccccagtctttcccggctcttgcacctggtttcccaggaatcttcccgccatccttatac
tccaggcccccactattgcccccaagcccactactgaagagcccgctcaaccacaatcag
gacaccaagcttccaagccctttggggacctctgcaatgccacttgtgtcggtggcaaac
aacaacagcggcagcaacaacaatcgaatgcagcactcgggggaaagatctgaaatcata
tcggacagttcctttacagagaaggccaaggcaaaaggcagtgacctttctgacgcaagt
gatttcgaggatgttaatacaacaaccggaaccgacctggaaacgacgaccggtactggg
tcagaactggacagtgatgctgagagcgaccgagataaaaacaaggagaaaaacaaacac
ttggaaagcaagcaggagaacatcaacagcttgatcccaaccagttcaaacaacagtttt
gaaagacctttttcatcttcccagcattcctttttccctcctccagatgaacaattgttt
ccctctgtaggggcagccagtgactctattaaagcaattgcctccatagctgagaaatat
tttggccccggatttatggggatgcaggagaagaaaacaggaccccttccctaccattcc
atgttcccatttcagttcctccccaattttccacactcactgtacccttttacagatcga
accctgaatgctaacttgctggtcaaggctgaaccaaagtcacccagggatgtccaaaaa
ataggtagcaccagctccgagacaccatttgaccttaccacaaaaccgaaagagatgaag
ccagcatttctgacccccaaggtcacctctgctccgtttcttggtgaggagcagccactg
gatctgagcattagcaaccgcagcagagccagccacaatggagcagccgagccccggaga
aaccacgtgtacggtgaccggaaaacagtggttagtgaggagctcccaaaggttcctcag
tctcatcctccacagcagccatcactgcactatgctaagccttcccccttcttcatggat
ccaatatacagcagggtggagaaacgcaagctgatggatccagtcagtactctgaaggag
aagtacctacgacccaacccactcctgtttcacccacagatgtctgcaatagagaccatg
acagaaaaactggagagtttcagggctctgaaaccagatacgacgagtgtgctgcagccc
ctgacgcatcacccgtttaacttccgatcgccacccccaacgctctccgattccatcctg
cgcaagggcaaggagcgctatacttgcaggtattgtggaaagatattccctcgatctgca
aatcttactcgccacctccgaacacacacaggggagcagccctacaggtgtaaatactgt
gacaggtcctttagcatttcctccaacctgcaacggcacgttcgaaacatccacaacaag
gagaaaccttttaaatgtcacctgtgtaaccgatgctttggccagcagaccaacctggac
cggcatctcaaaaaacacgagcacgaaaacgttccagtgagccagcactctggggtcatt
tcaaaccaccttggcacaagtgcctcctcccctaattcggaaccagacagccacgcactt
ttagacgagaaggaggattcctatttttccgaaattaggaattttatcgccaacaatgaa
ttgaatcaggcctccagtttaactgacaaaaggcccgaaattcaagatggcaacaattct
cagagccatggtctacccaatcagaaatcagtggacatggatgatgaggaagaggaggag
ctggaggaggaagaggaggaagacagtagcttaacggagaaatcacaaggtgaagtggta
tcgcccaccacagaggcccgggggacatttgaagaggaagatgaggaggaggaggaagcc
acctcactcacaatgagttacaaccacacacgaaggtgtattgaggaggaagaagttggc
ctcttagatttggagccgattccgaattttgggaagggcctggacctccgcaaagcagca
gatgagccgtttgaagttaaagatgtgtttaattccaccttagactctgaggcaataaaa
gaaagtctgtacaggcaggctaaaacccaggcttatgcaatgatgctgtccctttccgaa
aacaattctctccacacttcctcccagaattctctggatgcttggctaaacatggcaggg
gcagcctcggactcggggaccttcaaccccatcaaccacatctga
DBGET
integrated database retrieval system
