Latimeria chalumnae (coelacanth): 102363612
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Entry
102363612 CDS
T02913
Symbol
THBS2
Name
(RefSeq) thrombospondin 2
KO
K04659
thrombospondin 2/3/4/5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04145
Phagosome
lcm04510
Focal adhesion
lcm04512
ECM-receptor interaction
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102363612 (THBS2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102363612 (THBS2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102363612 (THBS2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102363612 (THBS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102363612 (THBS2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102363612 (THBS2)
00536 Glycosaminoglycan binding proteins [BR:
lcm00536
]
102363612 (THBS2)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Phagocytosis
Opsonins
102363612 (THBS2)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102363612 (THBS2)
Exosomal proteins of colorectal cancer cells
102363612 (THBS2)
Exosomal proteins of bladder cancer cells
102363612 (THBS2)
Glycosaminoglycan binding proteins [BR:
lcm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102363612 (THBS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_ADAMTS
EGF_3
TSP1_CFP_C
cEGF
Motif
Other DBs
NCBI-GeneID:
102363612
NCBI-ProteinID:
XP_006008696
Ensembl:
ENSLACG00000002742
UniProt:
H3A092
LinkDB
All DBs
Position
Un
AA seq
1177 aa
AA seq
DB search
MVLRNSLLWLTILLNLWTTCLAQGDEVEDETVFDLFEISHISQRTLGAKLFFGPDSNNPT
YRFIRFDHIPSVSQPALKQILRLMQNNEGFILTATLRQDRGSRGTLIAVEGPGSQRQFEI
VSNGRANTLDLVYWVEGSQNVVSFEDVDLAESQWKNITLQVTGENANLYIGCDQIDGIIL
DDPFYEHLRSDNSKMYVAKGSTRANHFRGMLQKVRFIFDTSVEDILRNKGCPVSQPAEAN
TINESTEIVDLSPAIKTDYVGHKTDKVVDFCEHSCEELGSMFGELKGLRIIVKNLIDGVQ
KLSEENGILKDKVDQYVEKLTEKRMCWQDGRLFAANESWTVDSCTKCTCKESKIVCNQIT
CSPVYCAVPSFIEGECCPVCLPKDSEDGWSPWSEWTECSATCGSGTQQRGRSCDATSNPC
EGSSIQTRTCSLGKCDHRIRQDGGWSHWSPWPPCSVTCGEGNKTRIRLCNSPIPQLGGKE
CEGSGRETKSCTSIACPIDGNWSPWSPWSSCTATCGGGLRERARTCNSPKPQYGGKKCLG
DEKENEICNKVDCPIDGCLSNPCFVGVECSSASDGSWECGPCPVGYRGNGMFCEDIDECE
LVSDVCFKVNALQRCVNTDPGFHCLPCPPRYKGNQPFGLGVEAAKTGKQVCEPENPCKDK
THSCHKYANCIYLGHFSDPMYKCECKIGYAGDGIICGEDSDLDGWPNKNLICAANATYHC
RKDNCPLLPNSGQEDFDKDGEGDACDKDDDNDGVIDDRDNCPLLYNPRQFDYDKDDVGDR
CDNCPYVHNPAQIDTDNNGEGDSCSVDIDGDEILNEHDNCPYMYNTDQKDTDRDGVGDQC
DNCPLVHNPDQTDSDNDLVGDQCDNNQDIDEDGHQNNLDNCPYIANSNQADHDKDGKGDA
CDFDDDNDGIPDDRDNCRLVPNVDQLDLDDDGRGDACKDDFDNDNIPDIYDICPENVDIG
ETDFRKFQMVHLDPKGTAQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTFY
VNTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEEKPSKAYGYSGVSLKVVNSSTGSG
ENLRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLTHRPKTGFIRVVVYEGKQIMA
DSGSIYDKTFAGGRLGLFVFSQELVFFSDLKYECRDN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaggaacagcctgctgtggctaacgatcctccttaatctttggactacttgt
cttgctcaaggtgatgaagtagaagatgagacagtttttgacctctttgagatcagtcat
ataagccaaaggaccctaggagcaaagctgtttttcgggccagattccaacaacccaaca
tatcgcttcatccgatttgaccacataccttcagtttcccagccagctcttaaacagatt
ctaaggctgatgcaaaataatgaaggctttatcctcaccgccaccttaaggcaggatagg
gggtcacggggtacccttattgccgttgagggtcctggatcccagagacagtttgaaatt
gtttccaatggccgagccaacactctggacctggtttattgggtggaaggttcccaaaat
gtggtctcctttgaggatgtcgacctggctgagtcccagtggaaaaacatcaccctgcag
gtgacgggagaaaatgccaacctctacattggctgtgaccagattgatgggatcatcctg
gatgaccctttctatgagcacctgaggtcagacaatagcaaaatgtatgtggccaaagga
tcaacccgagcgaatcactttaggggtatgcttcaaaaggtgcgtttcatttttgacact
tcagtggaggatattcttcgcaataaggggtgcccagtgagccagccagctgaagcaaac
actatcaatgaaagcacagagattgttgacctcagtcctgctatcaaaactgactatgtg
ggacacaagactgacaaagttgtagacttctgtgagcattcttgtgaagagctgggaagc
atgtttggggaactcaaaggtctgcgcattattgttaagaacctcatcgacggtgtccag
aaactgagtgaagagaatggcatactaaaggataaggtagaccaatatgtagagaagctg
actgagaagcgcatgtgctggcaggacggccgtctgtttgctgctaatgaaagctggact
gtggacagctgcacaaagtgcacttgcaaggaatctaaaattgtttgcaaccagattacc
tgctcaccagtgtactgtgctgttccatcattcattgagggagaatgctgtcctgtttgc
ctgcccaaggatagtgaggacggctggtcaccatggtctgaatggactgagtgttctgct
acctgtggctctggtacacagcagagaggaaggtcatgtgatgctaccagcaatccctgt
gaggggtcatcaatccagaccagaacatgcagtcttggcaaatgcgaccaccgcattcgc
caggatggtggttggagtcactggtctccttggcccccatgctcggtcacctgtggagaa
ggtaacaaaactcgcatccgtctctgcaactcacctattccacagctgggaggtaaagag
tgtgaaggtagtggacgtgaaaccaagtcctgtacaagcatcgcatgtcccattgatggg
aattggagtccatggtccccatggtccagctgcacagccacatgtggaggaggacttcgt
gagagggctcgaacctgtaacagccctaagccgcaatatggaggcaaaaaatgtctggga
gatgaaaaagaaaatgaaatttgcaataaagtggactgtccaattgatggatgcttatca
aatccttgctttgttggtgtggaatgtagcagtgcttctgatggctcttgggaatgtgga
ccttgcccagttggttaccgtggcaatggcatgttctgtgaagacattgatgagtgtgag
ttggtatcagatgtctgcttcaaggtaaatgctctccagcgttgtgtgaacacagaccca
ggatttcattgtttaccttgcccacctcgctacaaaggaaaccaaccttttggcctggga
gtggaggcagccaagacaggcaaacaagtgtgtgagcctgagaatccatgcaaagacaag
actcacagttgccacaagtatgccaactgtatatacttgggtcacttcagtgatcccatg
tacaagtgcgagtgtaagattggatacgctggggatggaattatctgtggtgaagactca
gacttggatggttggcctaataagaacttgatctgtgcggctaatgctacctaccactgc
agaaaggataactgtccccttctgcccaactctggccaggaagactttgacaaagatggt
gaaggtgatgcttgtgacaaagatgatgacaatgatggtgtcattgatgacagagacaac
tgtccgctcctgtataaccctcgtcagtttgattatgacaaagatgatgtaggtgaccgc
tgtgacaactgcccgtatgtgcacaaccctgctcagattgacactgataacaatggagaa
ggagactcctgctccgttgatatagatggtgatgaaattcttaatgaacatgataactgc
ccttacatgtacaatactgaccagaaggacactgacagagatggagtgggtgaccaatgt
gacaactgcccccttgtacacaaccctgatcagactgactcagacaatgaccttgtgggt
gaccagtgtgacaacaaccaggacatcgatgaggatggtcaccagaacaatctggacaac
tgtccctacattgctaattctaaccaggcagaccatgataaagatggaaaaggtgatgct
tgtgactttgacgatgacaatgatggcatccctgatgacagggacaactgtcgtttagtg
cccaacgttgaccaactggatttagatgatgatggccgaggagatgcctgcaaggatgat
tttgacaatgacaatattcctgatatctatgatatttgtcctgagaatgttgacatcggt
gaaactgacttcaggaaattccagatggttcatctagatcccaaaggaacagcacagatt
gaccccaattgggtggtccgtcatcagggtaaagaactggtccagacagccaactctgat
cctggcatagcagtaggctttgatgaattcaatgctgttgacttcagtggaacattctat
gtgaacacagaccgtgatgacgattatgctggatttgtgtttggctatcagtccagcggt
cgcttttatgttgttatgtggaaacagatcacgcaaacctattgggaggagaagccttca
aaagcttacggatactctggagtatctctcaaggtggtgaattcatccactggatctggc
gaaaatttgagaaatgctctctggcacacaggaaatactccaggacaggttcgtactctg
tggcacgaccctaagaacattggctggaaggactatactgcctacaggtggcacttgact
cacaggcccaaaacaggttttattagagtggtagtgtatgaaggaaagcaaatcatggct
gactcgggttccatctatgataaaacctttgctggtggacggctaggtctctttgtcttc
tctcaagagctggtcttcttttcagacctcaaatatgaatgcagagataactaa
DBGET
integrated database retrieval system
