Latimeria chalumnae (coelacanth): 102363618
Help
Entry
102363618 CDS
T02913
Symbol
PATJ, INADL
Name
(RefSeq) PATJ, crumbs cell polarity complex component
KO
K06092
InaD-like protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102363618 (PATJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
102363618
NCBI-ProteinID:
XP_014352293
LinkDB
All DBs
Position
Un
AA seq
1104 aa
AA seq
DB search
MPENPASGTSTLDKQHVLQAIDRLKTKLREKGDTSQTEKLNILHDTVQSPLFNQILTIQH
SIKQLKEQLNRMPSGCWADFDFSQKGLLVFNADSPVSALSGTPQYENIPSGTGHMIVNQP
VPSVTPRKADNQFDTIIKKTAQGRQVEYIELQKPAVGGLGVSLIGCNNDNERQAGIFIKV
QPGSIAARDGRLKENDHILAINHTPLDQNVSHQQAIALLQQSVGSVHLVVARGSTPNNKP
DNITPSQPVRWNHIEDIELINDGSGLGFGIVGGKSTGVIVRTVVPGGLADRDGRLRTGDH
ILKIGGTDVQGMTSGQVAQVLKNCGNCVRMVIARNPTGNVSLKPPTPTNLPVATIPALLN
QNATVAKPVNSDTYDVELKKKNGQSLGITVVGYVGSSNTDSSGVFVKSIVPGSAAEQNGL
IQTQDRIVAVDGVNIQDFTNQEVVERLRNTGQTVHLTLARKKRCSNFLSRERSLDKDVSR
LSLARTMETEINSGSESEEDQEQKENFQNETKQKLQALAKVEHLPQEDPLKSKWEKLLGP
ECEVMVVKLNPMILDDAELQKYSKLLPVHTLRLGVELDSFDGHHYISSVAPDGPAAINGL
LQPEDELLEVNGVQLHGKSRREAVSFLREVPPPFTLVCCRRMFEDGNETLVDEPSSPKVT
SRPKATSPELLSPETLKPPLPWEKVSVNNQVNSKSDADPEDEGEGELALWSDEVKVIELE
KGSRGLGFSILDYQDPLDPARTVVVIRSLVAGGVAESNGGLLPGDRLVFISDNYLDNLTL
AEAVEVIKSVPPGKVHLGICKPLVAEGNNAESLCPPDSRSEAENSEEMKPIDPLYSSILP
APWGFSDELAFQEVVVDEPEMDLGIELQHQSDVDHFREPWDLQQFLMPHLEEREMLVDDE
CLVDHMTFKPTEKGTRGIPEDTSSPKEKKLSYTEEWVKEVKPVEFPGTQLRHQPMNTAPV
PQIKYNNEHEGEEKFSGSSQSSTSTESCDNRPKPESFKKTISLGKTNSDLGIRVKNDCQG
AGLTVKHIDHEGAVGRDGKLKEGDFIVASSQVPAKVVNSAQGQALLSSELPEREEGEGEE
TPAFSHWGVPRKLLYAKDSVKIDM
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaatcctgcatcaggtacttctacactagataaacagcatgttttgcaagct
attgatcgcttgaagacaaagctgagagagaaaggagatacttctcagactgagaaacta
aatattttacatgacacagtacagagtccactgtttaaccagatactgaccattcagcat
tctatcaaacaactaaaggaacaactgaatcggatgccctcaggctgttgggcagatttt
gatttttctcagaaagggttgttggtgttcaatgcagattctcctgtcagtgctttatct
gggacaccgcagtatgaaaacattccaagtggaaccggtcatatgattgtcaatcaacca
gtgccatcagtaactccaaggaaagcagacaatcaatttgatacaattattaaaaaaact
gctcagggaaggcaagttgaatatatagagttacagaaaccagcagttggaggcctgggg
gttagtttgattggttgtaacaatgacaacgaaagacaagctggcatttttataaaagtg
caacccgggagtatagcagccagggatggaaggttgaaagagaatgaccacatattggcc
attaatcacaccccactggaccagaacgtttcccatcagcaggctatcgctttactccag
cagtctgttggatctgtgcatttagtggttgccaggggatcaacccccaacaacaaacca
gacaatataactccatctcagccagtccgttggaaccacattgaagatattgagttaatt
aatgatgggtcgggcttggggtttggaatcgtaggtggaaagtcaactggagtaattgta
cgaacagttgtccctggaggattagcggatcgggatggaaggcttaggacaggtgatcac
attttaaaaataggaggtaccgatgtacaaggaatgactagtggacaggttgctcaggta
ttgaaaaactgtggaaattgtgtcaggatggtaattgcaagaaatcctactggaaatgtt
tctttaaagcctccaactcctacaaatttacctgttgcaaccattcctgctttgttgaat
cagaatgcaactgtggctaaaccagttaacagtgatacatatgatgtagaacttaagaaa
aagaatggacagagtcttggtataacagtggttggctatgtggggtcatctaatacagat
tcttcaggtgtttttgtaaagagcattgtacctggaagtgctgcagagcagaatggtctc
attcaaactcaggacaggattgttgctgttgatggagtaaacattcaggatttcacaaat
caagaagtagtagagagattgcgtaacactggtcagactgtgcaccttacattggcaagg
aagaaacgttgttccaactttctttctagggaaaggtcattagataaagatgtatctcgc
ttatcgttggcaagaactatggagactgaaatcaattcaggcagtgagagtgaagaggac
caagaacaaaaagaaaattttcaaaatgaaaccaaacaaaaattgcaagcattggcaaaa
gttgaacatttaccacaagaagatccattgaaatcaaagtgggaaaaactgcttggacca
gaatgtgaagtaatggttgtcaagttgaatccgatgatattggatgatgctgagctgcag
aaatattcaaagttattacctgtccatactctgagattaggtgtggaactagattctttt
gatggacatcactacatatcctcagtggcaccagatggtccagctgctataaatggctta
ttacaaccagaagatgaacttttagaggtcaatggggtgcagctacatggaaaaagtcgc
cgtgaagcagtttcatttctacgtgaggtccctcctccatttactcttgtatgctgtcgg
cgtatgtttgaagatggcaatgagacacttgtagatgagccatctagtcccaaagtcaca
tctcgtcccaaagccacatctcctgagcttttaagccctgagacactgaagcctccactg
ccttgggaaaaagttagcgtaaataaccaggtaaactcaaaatcagatgctgaccctgaa
gatgagggagaaggagaattagcattatggtctgatgaagtgaaggtaattgaactcgag
aaaggatcaagaggattgggattcagcattttagactaccaggatcctttagatccagct
cgaactgttgttgtgattcgttctttggtagctggtggggtggcagagagcaatggtggg
ctactacctggggaccgcctagtctttatcagtgacaactacctggacaatttaactcta
gctgaagctgtggaagtgataaaatcagtaccacctggcaaagtccatcttggtatctgc
aaacccttggtggctgaaggcaacaatgctgaaagtttgtgccctccagactcaaggagt
gaggctgaaaattctgaagagatgaaacctatagatccactttattcatcaatacttcct
gcaccatggggattcagtgatgagctggctttccaagaagtggtggtggatgaaccagag
atggacctggggatagaattgcaacatcaaagtgatgtagaccacttcagggagccttgg
gaccttcagcagtttctgatgccccacttggaagagcgggaaatgctggtggacgatgag
tgcttggtggatcacatgacttttaaacctactgaaaaaggtacccgaggaattccagag
gatacatcatctcctaaggaaaagaaactaagctacacagaagaatgggttaaagaagta
aagcctgttgaatttccaggaacccagttaaggcaccaaccaatgaatactgccccagtg
ccacagatcaaatataataatgaacatgagggtgaagaaaagttcagtggaagctctcag
tcatctacttctactgaaagctgtgacaacagacccaaaccagaaagtttcaaaaagacc
atttccttaggaaaaaccaacagtgacttaggaataagagtgaagaatgactgtcaagga
gctggattgactgtgaaacatattgaccatgaaggggctgttggaagagatgggaaactt
aaagagggggattttattgttgcctcaagccaagtgcctgctaaagttgtgaattctgca
caaggacaggccttgttgtccagtgaattgcctgaacgagaagaaggtgaaggggaagaa
acgccagctttcagtcactggggagtaccacgcaaacttctttatgctaaagattcagtc
aaaatagacatgtaa
DBGET
integrated database retrieval system
