Latimeria chalumnae (coelacanth): 102363708
Help
Entry
102363708 CDS
T02913
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102363708
00535 Proteoglycans [BR:
lcm00535
]
102363708
00536 Glycosaminoglycan binding proteins [BR:
lcm00536
]
102363708
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102363708
Proteoglycans [BR:
lcm00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102363708
Glycosaminoglycan binding proteins [BR:
lcm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102363708
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102363708
NCBI-ProteinID:
XP_006008936
LinkDB
All DBs
Position
Un
AA seq
651 aa
AA seq
DB search
MDPRRCPWLAGSLLPLPLPLPLLLLLGSRWLCAAAQLLEERGSKGHLDLTALIGVPLPPS
VSFITGYEGFPAFSFGQDANIGRLTRAVIPQPFYQDFAIIVTVKPTTNRGGVLFAITNAF
QKIIHLGLRLSAVDDGTQRVILYYTDPGNQRSREAASFKVPAMTNRWNRFTLAVQGKDIV
MYMDCEEYNRAEFRRLPHPLEFEASSGIFIGNAGGTGLEKFIGSIQQLVIKQDPSAAEDQ
CEDDDPYAVSGDASGDGGQEQEVVAVPRETVPFTEAPPTEEIGGPVQAPPTEPSYTDEAE
DFSGHHPSGLEETSLHTESHSTQPQEELVTSKEQGSTGSSGDKEDGEKGDAGLLGLREGS
GSGTEALAREKSSGDLNISYTKGEKGEPGDPGPPGPAGPPGPSSQPDTSELQTGSPGPVG
SQGKPGLSGKDGKPGAPGKDGSPGERGPQGFPGLAGEMGPKGEKGDPGEGLPGLPGPPGP
PGPVRGISALETDGSGFGDMESDVKIICPPGPPGPPGSPGLPGLPGKPGSGSESSTPGPS
GPPGSQGQEGKDGGSGEPGLPGPPGLPGLDGAAGPQGEKGEKGDEGQVGLPGLKGDTGER
GLPGPPGPTGADGQSGHPGPTGPPGPPGPPGPPGRLVEGDGSGFEVSLYHK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaggcgctgcccctggctggccggttcgctgctgccgctgccgctgccgctg
ccgctgctgctgctgctgggctcgcgctggctctgcgcagccgctcagcttctggaagaa
cgaggatcgaagggacatcttgatctcacagcgctcatcggggtcccgcttccaccttct
gtttcctttatcactggatatgaaggctttccagcattcagctttggccaagatgctaac
atcggccgcctgacacgggcagttatacctcagcctttctaccaagactttgctatcatc
gtgactgtaaagccaaccactaaccgaggaggagtgctttttgccattacaaatgccttt
cagaaaatcattcacttgggattaaggttgtctgcggtggacgatggcacccagagagtg
atcttgtactacacggatccaggcaaccagaggtctcgagaagctgcctccttcaaggtg
ccggcaatgaccaacaggtggaatcgcttcacactggctgtccaaggcaaggacatcgtt
atgtacatggactgtgaagaatataaccgagctgagtttcggcggttgcctcacccgctg
gagtttgaggccagttctggaatatttattggaaacgctggaggcactggcttggagaag
ttcattggatcaatccagcagttagtcatcaagcaggatccaagtgctgcagaagaccag
tgtgaagacgacgatccatatgcggtctctggagatgccagtggtgatggtggtcaagaa
caggaagttgttgctgtgccacgagaaactgtgccatttacagaggccccaccaacggaa
gagataggcggaccagtacaagcgcctccaacagaaccctcttacactgatgaagcggaa
gatttctctggacatcatccaagtggtttagaggagacttccttacacactgagagccat
tcaacacagccccaagaggaacttgtaacaagcaaagaacaaggatcaactggctcaagc
ggtgataaagaagatggagaaaagggtgatgcaggacttttaggattaagagaaggtagt
gggtctggtacagaggctttggcccgtgaaaaaagttctggagacttgaacatttcttat
acaaaaggtgaaaagggggaaccaggagaccctggaccacctggaccagctgggccgcct
ggaccatccagccaaccagatacatcagaactgcagacagggtctcctggacctgtaggg
tcccagggaaaacctggcctttctggaaaagatggaaaacctggggctccaggtaaagat
ggatcgcctggtgaaagaggaccgcaaggatttccaggcttagccggcgaaatgggccct
aaaggtgaaaagggtgatcctggtgagggactcccaggacttcctggcccgcctggcccg
cctggccctgtaagaggaattagtgcacttgaaactgatgggtcaggttttggggacatg
gagagtgatgttaaaattatttgtcctcctgggcctccaggtcccccaggatctccaggt
ctgcctggacttcctggaaaaccaggatcaggttcagaatcaagcactccaggaccttca
ggaccacctggctcacaaggtcaagaagggaaagacggtgggtcaggggagcccggactg
ccaggtcctccaggtctgccaggacttgatggagctgctggcccacaaggagaaaaggga
gaaaaaggtgatgaaggtcaagttggtcttcccggtttaaagggtgatactggagagaga
ggactaccagggcctccaggtccgacgggcgctgatggtcaatctggtcaccctggacct
actgggcccccaggaccccccggccccccaggaccccccggccgcttggttgagggagat
ggctctggatttgaagtaagtctttatcacaagtag
DBGET
integrated database retrieval system
