Latimeria chalumnae (coelacanth): 102363717
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Entry
102363717 CDS
T02913
Symbol
ATG4C
Name
(RefSeq) autophagy related 4C cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04136
Autophagy - other
lcm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102363717 (ATG4C)
04136 Autophagy - other
102363717 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcm01002
]
102363717 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102363717 (ATG4C)
03029 Mitochondrial biogenesis [BR:
lcm03029
]
102363717 (ATG4C)
Peptidases and inhibitors [BR:
lcm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102363717 (ATG4C)
Membrane trafficking [BR:
lcm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102363717 (ATG4C)
Mitochondrial biogenesis [BR:
lcm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102363717 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102363717
NCBI-ProteinID:
XP_006010496
Ensembl:
ENSLACG00000007539
UniProt:
H3AFU9
LinkDB
All DBs
Position
Un
AA seq
456 aa
AA seq
DB search
METTGTDEVEKLKTKFVSAWNNVKYSWILKTKTYFSRNSPVFLLGKCYHFKSEEPNVHLP
DEANSAAYSDPVSGNVEDFRKDFTSRIWLTYRQDFPQIPRSGLTTDCGWGCTLRTGQMLL
AQGLLLHFLGRAWTWPGALQIESLETESWSSNTARKFVASLEASLQGERDQVLLNNDKRT
LKRSYDASEIKSESYHRKIISWFADSPSALFGLHNLINCGKHSGKHAGDWYGPAVVAHIM
RKAVEEATDPELQGITIYVAQDCTVYNADVIARQQSTTGSEKDTKAVIILVPVRLGGEKT
NPSYLEFVKGILSIEYCVGIIGGKPKQSYYFNGFQDDSLIYMDPHYCQSFVDVSIKGFPL
ESFHCPSPKKMSFTKMDPSCTIGFYCRNVQDFEKISEEVTRVLNSSRKEKYPLFTFVKGH
AKDYDFAGTPVLEQSHHFPEDERRLKRFSSEDFVLL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactggaacagatgaggtagaaaagctaaaaacaaaatttgtatccgcctgg
aacaatgtgaaatacagctggatacttaagacaaaaacctattttagtagaaactcgcca
gttttcctgctgggaaaatgttatcatttcaagtctgaagaaccaaatgtacacttacca
gatgaggctaattctgcagcatatagtgacccagtttcaggaaatgtggaggacttccgt
aaggactttacctctagaatatggctaacctacagacaggattttcctcagattccacgt
tcgggcttgacaactgattgtggttggggttgtaccttacgaactggtcaaatgttgtta
gctcaagggctcttacttcacttccttggtagagcttggacctggccaggtgcactgcag
attgagagcttagaaactgaatcatggtcatcaaacactgcgaggaaatttgttgcatca
ttggaagcatctctacaaggggaaagagatcaagtcttgttaaacaatgataaacggact
ctgaagagatcctatgatgctagtgaaataaaaagtgaaagttaccataggaaaatcatc
tcatggtttgcagactctccatcagcactgtttggtttacataatctgatcaactgtgga
aagcattcagggaagcatgctggtgattggtatggaccagcagttgttgcacatattatg
agaaaagctgttgaagaagcaacagaccctgagttacaaggaataacaatttatgttgct
caggactgtacagtttacaatgcagatgtaatcgcaagacaacaatctaccacgggatct
gaaaaagacactaaagcagtcattattctagtacctgttaggcttggaggagaaaagact
aacccttcttatcttgagtttgttaaggggattttaagcattgaatattgtgttggcatc
attggtggtaaacctaagcagtcctattactttaatgggtttcaagatgacagtttgatt
tacatggatcctcattactgccaatcttttgtagatgtcagcataaagggtttcccactt
gagtcattccattgcccttcacccaagaagatgtcattcactaaaatggacccaagttgc
acaataggattttactgtaggaatgtacaagactttgaaaagattagtgaagaagtcact
agggtgctgaattcgtcacgcaaggagaagtatccattgtttacttttgttaagggtcat
gcaaaagactatgactttgctggcacaccagtccttgaacaaagtcatcacttccctgaa
gatgagagaagactaaagagattcagctcagaagattttgtgttgctctaa
DBGET
integrated database retrieval system
