Latimeria chalumnae (coelacanth): 102363760 Help Entry 102363760         CDS       T02913                                  Symbol SYMPK Name (RefSeq) symplekin   KO K06100   symplekin Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03015   mRNA surveillance pathway lcm04530   Tight junction Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     102363760 (SYMPK)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     102363760 (SYMPK)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lcm03021]     102363760 (SYMPK)    03019 Messenger RNA biogenesis [BR:lcm03019]     102363760 (SYMPK) Transcription machinery [BR:lcm03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      102363760 (SYMPK) Messenger RNA biogenesis [BR:lcm03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      102363760 (SYMPK)     U7-dependent histone pre-mRNA processing factors      102363760 (SYMPK) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N TOR1L1_N Motif Other DBs NCBI-GeneID:  102363760 NCBI-ProteinID:  XP_014343900 LinkDB All DBs Position Un AA seq 1372 aa AA seqDB search MCPQCRRAAAVPDFLGLGRGLFFYHGGVGAVIAGEEEGSGSVLVAGKAGSELTGKSWFTG ATWLPAFPLFVARKLCLNCARRLVHLSLNMAAEGGNGAEDGTRGSIAFFFEEEEISAVET MSTSERVVDLLNQAALITNDTKITILKQVQELILNKDPTLLDNFLDEIIAFQSDKSIEVR KFVIGFMEEACKRDNELLLKLIANLNILLRDENVNVIKKVILTMTQLYKVALQWIVKSRV ISDLQETCWEMVSTMTDDIIAMLDSDNDGIRTHAIKFVESLIITLSPRTSDSEVPKRQEN DISVDRIPKDHPHVVCGILQEKGKCALEQLLKFMVHPAITSINLTAALGSLATIARQRPM FMSEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLNVLKHPSSYEFHAQITTLLLDLG TLQQEITRNMPSVKDVRKRQRDEADQGLKKLKMEPVLAEDDEDKDMEQAPVPVSKPYPQS TQSAIDITAEFLLPLLTPENVANLVLISMVYLPDTMPASFQATYTPVESAGTEAQIKHLA RLMATQMTSAGLGPGVEQLKTKKEEPKEEKGLKPESVLIKRRYSVLPQGQAISVVGVQYT SSSLKEEDPPQAKRRPEPIILGTQSRSAGTSGRKKVFRLADVIQPLTDVQVEKLKVAAVN RILQSEKAIASSGAAQIRVKILARLVTHFGGNLKEGVLNFILEDIRNRIDLAFAWLYQEY NVYLNKLPTGSLDSYEDCLIGLLSGMQEKLEQRDGLFTRLVLEAPFITDSALEVIRKYCE DRSHTILGMSTLQELILRRPSKQSDYLQVLLDLSSHEREEIRIQSLVFIKRLYEKDQLRD DILKFALNYLQLLVHPNPPSLLFGADNDTEVAAPWTEDTVKQCLYLYLALLPQNHKLIHE LASVYTEAIADIKRTVLRVIEHPIRGMGMNSPELLLLVENCPKGAETLVTRCLHILTDKV PPSPELVKRVRDLYHKRVSDIRFLIPVLTGLEKKEVIQALPKLIKLNPVVVKEVFNRLLG TQQGDGSSAVSPLTPGELLIALHNIDSTKCDMKSIIKATNLCFAEKNVYTSEVLAVVMQQ LMELSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKP QSFQVLLQLPPQQLTGVFEKCPELREPLLMHVRSFTPHQQAHIPTSIMAVLEATSKPEPE PVAPPVPAEGEETETRTIARIQQDVMAARLAQEKALKRQVEEEQKLRQLAGPSRSIQSLV EQSRSVVLEESMEFREEGLEPDTPTIFINIKEDEEDMATGDSTAFPTRQEGSIVVKDSDV SEGVTSGTLVEGSVTEPVILVRDEPEESTVAGKEPPVGQPEEAMDQSAEGGP NT seq 4119 nt NT seq  +upstreamnt  +downstreamnt atgtgccctcagtgccggcgcgcagccgcagtgccggatttcttgggtttggggagaggg ttgttcttctatcatggcggcgttggggctgtgattgccggtgaagaggagggaagcggt tcggttcttgtcgctgggaaagcagggagcgagttaacggggaagagctggtttacagga gccacttggctacctgccttcccccttttcgtggcaagaaagctttgtttgaactgtgcc cggaggttggtgcacctgagtctgaacatggctgccgagggtggaaatggtgccgaggat gggactcggggcagtattgccttcttttttgaggaggaagagatctcagcagttgagact atgagtaccagtgagagggttgtggatttactaaaccaagccgccctgatcacaaatgac accaagatcaccattctcaaacaggttcaggaactgattctaaacaaggatccaactttg ctggataacttcctagatgaaattattgccttccagtccgataagtcgattgaagtacgg aagtttgttattgggtttatggaagaggcgtgcaagagagacaatgagctgctgttgaaa ctcattgccaacctcaacattctgctgcgggatgagaatgtcaacgtgataaagaaggtc atcctcaccatgactcagctctacaaagtggcattgcagtggatcgtaaagtcacgggtg atcagcgacttgcaggaaacctgctgggaaatggtgtctactatgacagacgatatcatc gccatgttggactcggacaatgatggaatccgcacccacgccatcaagtttgttgagagc ctgatcatcacgctgtcgccgcgcacttccgattccgaggtgccgaaacggcaggagaat gacatcagcgtagatcgcattcccaaggaccaccctcacgttgtatgtggcatcctgcag gagaaagggaaatgtgccctggagcagctgctgaaattcatggttcacccggcgatcacc agcatcaacctgaccgctgcactaggatctttggcaaccattgcccgccagcggcccatg ttcatgtcggaggtcattcaggcctatgaaaccctacatgcaaacctgcctccgacgctg gccaaaagtcaggtgagcagcgtgcggaagaacctgaagctgcacctgctgaacgtcctc aaacacccatcctcgtatgagtttcacgcccagatcaccaccctccttctggatctgggc accctccagcaagagatcacacgcaacatgcccagcgtgaaggacgtgcgcaaacgccag cgggacgaggccgaccagggcctgaagaagctcaaaatggagcccgtgcttgccgaagat gacgaggataaggatatggaacaagcgcctgtgccagtctcgaagccgtaccctcagagc acccagtccgccatcgacatcacagctgagttcctgctgccccttctgacaccggaaaac gtcgcaaacctggtgttgatcagcatggtgtacctccccgacaccatgccagcgtcgttc caagcgacctacactccggtcgagtctgctggcactgaagcccaaattaagcatctggcc cgtctcatggcaacccagatgacctcagcaggacttggaccaggtgtcgaacagctgaag actaagaaggaggagccgaaggaagagaaggggctgaagccggagagcgtgctgataaaa cgtcggtattcagtcttgccccagggccaggccatctctgtggtgggggtgcagtacacc agttcctccctgaaggaggaggatcctccgcaagccaaacgacgcccagagcccatcatc ctgggaacgcaatccagatcggcgggaaccagcgggcgtaagaaagtgtttcgtctggca gacgtgatccagccgctgacggacgtgcaggtggaaaagctgaaggttgcggcggtgaac cggatccttcagtcggagaaagccatcgcgtctagcggggcagcgcagatccgggttaag atcctggctcgactggtcacccatttcggggggaatttgaaggagggggtgctgaacttt attctagaggatattcggaaccgcattgacctagcctttgcctggctgtaccaagaatac aacgtctacctgaacaaactgcctaccggctccctggacagctacgaggattgtctgatc ggtctgctgtcagggatgcaagagaaactggaacagagagatgggttgttcacccgcctg gtgctggaggcgcctttcattactgacagcgctttagaagttatccgcaagtactgcgag gacaggagccacactatcctgggaatgtccacactccaggagttgatactgaggcgtcct tcaaagcagtcagactacttgcaggtgctgctggacctgagttctcatgaaagggaagag atacgcatccagtccctggtgtttatcaagcgattgtacgagaaggatcagctccgtgat gacatcttaaaatttgccctgaactatctgcaacttctggtccaccccaacccaccctct ctgctttttggtgccgacaacgatacagaggtggctgccccatggacagaagatactgta aaacagtgtctatacctttacctggccctcctaccacagaaccacaaactgatccacgaa ctggcctccgtctataccgaagccatcgctgacattaagcgcacagtcttgcgtgttatt gaacatccgatacgtggaatgggcatgaactcgccggaactgctgctgctggttgaaaac tgtccgaagggagcggagacgctggttacccgctgcctccacatcctgactgataaagtg cctccgtcgcctgagctggtgaagagggtccgggatctgtaccacaaacgggtttccgac atcaggttcttgatcccggttctgaccgggctggaaaagaaagaggtgatccaggctttg ccgaagctgatcaagctgaaccctgtagttgtgaaggaggttttcaatcgcctgttgggg acgcagcagggtgatggaagttctgcagtttcgcctttgacccctggagagctgctgatt gcgcttcacaatattgattcgaccaagtgcgatatgaagtcaattattaaagccacgaac ctgtgttttgcggagaagaacgtttacacatcagaggtactggctgtggtaatgcagcag ctgatggagctgagccccctgcccatgttattgatgagaaccgtcatccagtccctgacc atgtacccccgcctgggcggcttcgtcatgaacatcctctcacgtctcatcatgaagcag gtatggaagtacccaaaggtttgggagggctttattaagtgttgccagcgaacaaagcca cagtccttccaggtcttgttgcagctcccacctcagcagctcacgggtgtctttgagaag tgccctgaacttcgagagccgctgctgatgcacgtccgctccttcacacctcaccagcaa gcacacatcccgacctccatcatggcagtgttggaggcaacttcgaaacctgaacctgag cctgtggcaccaccagtgcctgctgaaggggaggaaacagagactcgcacgattgcccgc atacagcaggacgtgatggctgcccgcctggcgcaggaaaaggcactgaaacgccaggtg gaagaagagcagaaactccggcagctggccggcccctcccgctccatccagtccctcgtg gagcagtccaggtcggtggtgcttgaggagtccatggagttcagggaagaggggctagaa cctgacaccccaacaatatttattaacataaaggaggacgaagaggacatggcaactgga gacagtacagccttccctaccaggcaggagggatcgattgtggtaaaggattctgatgtc agcgaaggggtcaccagcggaaccttggttgaaggcagcgtgacggagccagtgatccta gtgagagatgagccagaggaaagcactgttgctgggaaagagccaccagttggccaacca gaggaggcgatggatcagagtgcagaaggagggccataa

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