Latimeria chalumnae (coelacanth): 102363933 Help Entry 102363933         CDS       T02913                                  Symbol HTT Name (RefSeq) huntingtin   KO K04533   huntingtin Organism lcm  Latimeria chalumnae (coelacanth) Brite KEGG Orthology (KO) [BR:lcm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lcm03019]     102363933 (HTT)    04131 Membrane trafficking [BR:lcm04131]     102363933 (HTT)    03029 Mitochondrial biogenesis [BR:lcm03029]     102363933 (HTT) Messenger RNA biogenesis [BR:lcm03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      102363933 (HTT) Membrane trafficking [BR:lcm04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     102363933 (HTT) Mitochondrial biogenesis [BR:lcm03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     102363933 (HTT) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_GCN1 HEAT_EF3_N HEAT_MROH2B_C Motif Other DBs NCBI-GeneID:  102363933 NCBI-ProteinID:  XP_014345242 Ensembl:  ENSLACG00000005863 LinkDB All DBs Position Un AA seq 3073 aa AA seqDB search MATMEKLMKAFESLKSFQQQQGPAIAEEPAQKQKKDPTTTKKDRLTHCLTICENIVVQSL RNSPEFQKLLGIAMELFLLCSDDSESDVRMVADECLNKVVKALMDSNLPRLQLELYKEIK KNGAPRLFNTRPYLVNLLPCLTRISKRPEEAVQETLAAAIPKIMAALGNFANDSEIKVLL KAFVANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYTWLLNVLLGLLVPVEDDRPNPLVL GVLLTLRYLMPLLQQQVKDTSLKGSFGVTRKETEISPSPMQLIQVYELTLHYTQHRDHNV VTAALELLQQLFRTPPPDLLHALTTSGTMRSISITKSEADSRNRSGSILELIAGGGSSCS PVLLRKQKGKVLSGEEEALEDESETRSDVTTTTFTASVNSEAASDVPSSSGASTGGSVSP VPESVGHDIITEQPRSQHNLQSTDSVDLSGSDLTSTATDGDDDEMLSRSSSQISTVQSDA APDINGKITQDSSPTSDSSQTTTEGPDSAVTPSDSSELVLDGTESQYSGMQIGQLQDEEE ETTNIVAEEFVETFKNSALAMNKPHLLQTMGHSRQSSDSSVDRFISKDEGAEIGDLESKP SKIKGDIGHYTDDDAAPLIHCVRLLSASFLLTGQKNGLIQDKEVRVSVKALAVSCVGAAT ALHPEAFFNKLYKIPWESTDKPEEQYVSDVLKYIEHGDPQIRGATAILCGTIIHSILSKS RFNVESWMSSVKSSTENTITLVDFIPLLQKTLKDESSVTCKLACAAVRHCITSLCSSSYS ELGLQLLIDLLTLRNNSYWLVRTELLETLAEMDFRLVSFLERQAENLHRGDHHYTGLLKL QERVLSDVVIFLLGDEDPRVRHVAATVLVRLVPRLFYDCDQGQADPVIAVAREQSSVYLQ LLMHETQPASHITVSTITRTYRGYNILQNIPDVTVENSLSRVITAVSHALTSSTSRALTL GCVEALCLLSTIFPVCSWSVGWHCGYIASGSQASRVHLYKNRGRSFSMSQSNPTDESRKS CVVGMANMIQSLLSSAWFPLDLSSHQDALILAGNLLSAAAPKCLKNPWTAEDDVNTSTNK PEEPWPALGDRTLVSMVEQLFSHLLKVINICAHIIDDVAPGPTLKATLPSLANPPSLSPI RRKGKEREPVEQTAAPMSPKKNSETNPVARPAESVGAAPTSKSTSLGGFYHLPSYLKLYD VLKATHANYKVTLDLQNSNEKFGSFLRSALDVLSQLLELATLHDIGKCVEEILGYLKSCF SREATMATVCVQQLLKTLFGTNLASQYDGFSSNPSRSLGKAQRLGSSSLRPGLYHYCFMA PYTHFTQALADASLRNMVQAEHEQDTSGWFDVLQKVSSQLKSGIVNVTKHRADKNAIHNH IRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEY IEVGQFRESEAIIPSIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPA LQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENED KWKRLSRQIADVILPMLAKQQMHLDSHEALGVLNSLFETVAPSSLRPVDMLLRSMFVIPS TLALVGTVQLWISGILAILRVLISQSTEDIVLSRIQELSLSPNLILCQNINRLKEGGECV PPVEEQNGETQVKYLPEETLARFLLQLVGILLEEVATKQIKVDMSEQQHTFYCQQLGTLL MCVIHIFKSGMFRRITAAATKLFKGDGADGSFYTLENLNSLVQSMIPTYPSLVLLWCQIL LLINYTNYTWWSEVHQTPRRHSLSSTKLLSPQISGDSDESESKSKLGMCNREIVRRGALI LFCDYVCQNLHDSEHLTWLIVNHVQDLIGLSHEPPVQDFISAVHRNSAASGLFIQAIQSR CENLTTPTMLKKTLQCLEGIHLSQSGAVLMLYVDKLICTPFRVLARMVDTLVCRRVEMLL AETFQNSIAQLPVEELDRIQQYLHSNGLAQRHQRLYSLLDRFRAMIAEDTVSPSPLVSSH PLDGEKPLESIIVDKEFYLSLVQSQCCCRADSALLECTKLLNKLPQPELYSIMTTKEFNL SLLAPCLSFGLHSMSGEQGSALFETACKVTLDHVTHSLQHLPGSHQVFQPLKPMGNVSYW NKLSDLFGDGLYYQTIVTLCRALAQYLTSLSKQPADVHIPVDKEADITRFIVLSLEALSW HLMNDQVPLSVDLQAALDCCCLALQQPGIWSLLASAAYVTQACTVIICIKFIVEAGTYVA WEPEYITIACEVMAEMVESLQSVLCFGHRRNNSIPAFLTPILRNITISLARLPLVNSYTR LPPLVWKLGWSPRAGGDFGTSLPEIPVEFLQEKDIFREFIYRINTLGWTNRTQFEETWAT LLGVLVTQPIVMDQEEERPLEEDTERTQINVLAVQAITSLVLSAMTLPVAGNPAVSCLEQ QPRNKTLKALDTRFGRKLSVIRGIVEREIQAMVSKRENIATHYPYQAWDPVPSLSPATSG NLVSHEKLLLQINMEREMGSMEYKLGQVSIHSVWLGNSITPLREEEWDEDEEDESDVPAP SSPQTSPINSRKHRAGVDIHSCSQFLLELYSQWILPSNPGKKSPAILISEVVRSLLAVSD LFTERNQFEMMYTTLTELQKFHPSEDEILNQYLVPAICKAAAVLGMDKAIAEPVSRLLET TLRSTHMPSRIGALHGILYVLECDLLDDTAKQLIPIISDYLVSNLRGIAHCVNVHNQQHV LVMCAAAFYLIENYPLDVGPEFTAGIIQMCGVMVSGSEESTPSIIYHCVLRGLERLLLSE QLSRLDGEALVKLSVDRLNMHSPHRAMAALGLMLTCMYTGKEKSSPGRISNADPTAPDSE SVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYP QFMANVVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSPWV SALLPHVISRMGKSEQVDVNLFCLVAIDFYRHQIDEELDRRSFQSVFEIVASPGTPYHRL LTCLQSLHQITQL NT seq 9222 nt NT seq  +upstreamnt  +downstreamnt atggctaccatggagaaactgatgaaggcctttgagtccctcaagtcattccagcagcag caggggccagctatcgccgaggagcccgcacagaaacagaaaaaagaccctacaaccacc aagaaagacaggttgactcactgtttgacaatatgtgaaaatatagttgtacagtccctc aggaactccccagaatttcagaaactcttgggaattgccatggaattgttcctcttgtgc agcgatgactcagaatctgatgttaggatggtagctgatgaatgccttaataaagttgtt aaagctttaatggactccaaccttccaaggctacaactggaattatataaagagattaag aagaatggtgctcctcgattattcaataccaggccctatcttgtaaatctgctcccctgt ctgactcgaataagcaaacgacctgaggaagctgtgcaggagacactggctgcagcaata ccaaagatcatggctgctttgggtaactttgcaaatgacagtgagataaaggttttgctg aaggcttttgttgcaaatcttaaatccagctccccaacgattcgtagaacagcagccggt tcagctgtcagcatctgccagcactcgcgaagaacacagtatttctacacgtggttgttg aatgttcttttaggtttgctggtccctgtggaagatgaccgtcccaatcctctggtcctt ggagtgttactcacgctaagatatttaatgcctttactgcagcaacaggtgaaagatact agcttgaaaggcagttttggggtaactcgaaaagaaactgaaatctcaccttccccaatg cagctcatacaggtgtatgagttgacactacactacacccagcacagagatcataatgtg gtgacagcagccttggagttgttgcaacagcttttccgaacacctccacctgatctcctc catgccctgactacttctggcacaatgaggtcaatcagtatcaccaagagtgaggcagac agcaggaatcgtagtgggagcatattggaacttatagctggaggggggtcttcatgcagc cctgttcttctcagaaagcaaaaaggcaaagtactttctggggaagaggaggctttggag gatgagtctgaaactagatctgatgttaccactactactttcacagcttctgttaacagt gaagcagctagtgatgtcccctcttcctctggtgcctccactggtgggtcagttagtcca gttcctgaatctgtaggacatgacatcatcacagaacaaccccgttcacagcataattta caatctacagactctgtggacctgagtggttctgacttgaccagtacggctactgatgga gatgatgatgaaatgctaagtcggagctccagccaaatcagtactgtccagtctgatgct gcccctgacataaatggcaagatcacccaggattcctcgccaaccagtgatagctcacag accaccactgagggtcccgattcagcagtgaccccatcggacagttctgaacttgtacta gatggtacagaaagccagtattctggaatgcagattggccagcttcaggatgaggaggaa gaaaccacaaacattgttgcagaggagtttgtagaaaccttcaaaaattcagctttagca atgaataaaccccacttactgcagaccatgggccacagtcggcagtcttctgatagcagt gtagaccggtttatatcaaaggatgaaggtgcagagattggagaccttgaaagtaagccc tcaaaaataaagggcgatattgggcactacacagatgatgatgcagcccctctgattcac tgtgtgcggcttctctctgcttcatttctgctaacgggacagaagaatggtcttattcaa gacaaggaagtgagggtcagtgtcaaggcactggcagtgagttgtgttggagcagctact gcacttcatccagaagctttcttcaacaaactttataaaataccctgggaatccacagac aaaccagaggagcagtatgtttcagatgtcttaaaatatattgaacatggagacccacag atcaggggagccactgccattctctgtggaaccatcatccattccatcctcagtaaatct cgctttaacgtggaaagctggatgagtagtgtcaaaagttctacagaaaatactatcact ttggtagactttatacctttgctgcagaaaaccctgaaagatgaatcttcagttacatgt aaactggcctgcgcagctgttcggcactgcatcacaagtttgtgcagtagtagttacagt gagctaggattacaactactcattgatctcctgaccctaaggaacaactcgtattggctt gtcaggactgaactgttggaaactctagcagagatggatttcagattggtcagctttcta gagagacaagctgagaacttacatagaggagatcaccactacacagggctgttaaaactt caggagcgggtactcagtgatgttgtcattttcctgcttggagatgaggatcccagggtg cggcatgtggcagcgactgtattagtgaggcttgttccacggctgttctatgattgtgac caaggccaggcagatccagtgatagcagttgcaagagaacagagcagtgtctacctacag cttctcatgcatgagacacaaccagcatctcatatcacagtcagcaccatcacaagaacg tacagaggttacaacattttacagaacataccagatgtgactgtagaaaacagtctttca agggttatcactgctgtgtctcatgcactgacatcatcaacttctcgtgcactgacactt ggatgcgttgaagccctttgtcttctttcaacaatattcccagtttgcagctggagcgta ggatggcattgtgggtatattgcatctggctctcaagcgtccagagtccatctttacaaa aacagagggcgttccttcagtatgtcacaatccaaccctacagatgaatctcgaaagagc tgtgttgttggcatggccaatatgattcagtctttgttgtcatctgcctggtttccatta gatctttcttcacaccaagatgctctgatattggctggaaacttgctttcagctgctgct ccaaagtgtctcaagaatccctggacagcagaggatgatgttaatacgagtactaataaa ccagaagagccatggccagctttgggggataggactctcgttagcatggtggagcagctc ttctcccatctgttgaaagtcattaatatctgtgctcacataatcgatgatgttgctcct ggtcccacattaaaggcaaccttgccctctttagctaaccccccatctctaagcccaatc aggagaaagggcaaagagagagaaccagttgaacagacagctgcaccaatgagccccaaa aagaacagtgaaacaaatccagttgctaggccagcagaatctgttggagctgctccaacc agcaaatcaacttctcttggtggtttttaccatcttccttcatatctcaagctgtatgat gttttgaaggctacccatgccaactataaggtaacattagatcttcagaatagtaatgag aagttcgggagtttcctccgttcagctttggatgtcctctcacagttgttggagcttgca actcttcatgatatcggaaagtgtgtggaggaaatcctggggtatttgaaatcttgtttc agtagagaggccacgatggccactgtctgtgtccagcagttgctcaagacactctttggg acaaatttagcatcacaatatgatggattttcttccaaccccagtagatcactgggaaag gctcagcgcttaggctcttccagcttgaggcctggactctatcactattgctttatggca ccttacacacacttcacgcaagctttagctgatgccagccttagaaacatggtacaagct gagcatgaacaggacacttcagggtggttcgatgtactgcaaaaagtgtcctcgcagctg aagtctggcattgtcaatgtaactaaacatcgagcagataagaatgccattcacaaccac attcgcttgtttgagccactagttattaaggcattaaagcagtacacgactacaacttca gtacagctgcagaggcaggttttagatctgctggcacaactagtacagctgagggttaat tactgcctcctggactctgatcaggtctttattgggtttgttctcaagcagtttgaatat attgaggtgggccaattcagggaatctgaagctatcattcccagcatcttttttttcctg gtattgctgtcctatgagcgttaccactctaagcagatcattggaattcctaaaattatc cagctttgtgatggcatcatggccagtggccgaaaagcagtaacccatgcaattccagct ctgcagcccatagtgcatgacttgtttgtgttgcgggggagtaacaaagctgatgcaggc aaagagttggaaactcaaaaggaagtggtggtatccatgctgctgagactcatccagtac catcaagtacttgagatgttcattctagtactgcaacagtgtcacaaggaaaatgaagac aaatggaaaagactgtcacgccagatagctgatgtaatcctcccaatgctagcaaaacag cagatgcacttggattcccatgaagctttgggggttctgaacagtctatttgaaactgtt gcaccatcatcactacgtcccgtggatatgcttctgagaagcatgtttgttatacctagc acgctggccttggtagggactgttcagctgtggatttcaggaatcttggctatcctgcgg gttctcatttcccagtcaaccgaggatattgttttgtctcggatccaggagctctcccta tccccgaatctgatcttgtgtcagaacattaataggctcaaggaggggggtgagtgtgtc cctcctgtagaagagcagaatggagaaacgcaggtgaaatatctacctgaggaaacattg gcaaggtttttattgcagctggtggggattctgctggaagaagttgctactaagcaaatt aaggtggatatgagtgagcagcaacacacattctactgccagcagttaggcacactgctt atgtgtgtcatacacatcttcaaatcaggaatgttccggagaatcacggcagctgccacg aagttgtttaaaggagatggcgctgacggaagtttctataccttagaaaatctgaattcc ttggttcagtccatgattcccacctacccctcactggtgctgctctggtgtcagatcctg ctgcttatcaactacaccaactacacctggtggtcagaggtgcaccaaacacccagaaga cacagtctatccagtaccaaattgcttagccctcaaatatctggagacagtgatgagtct gaatcaaaatctaaactgggcatgtgcaatagagaaatcgttcgaaggggagcacttatt ctcttctgtgattatgtttgtcaaaacctgcatgattcagagcacttgacttggcttata gttaatcatgttcaggaccttattggtttgtctcatgaacctcctgtgcaagattttatc agtgcagttcacagaaactctgctgccagtggtctttttatccaagccattcagtctcga tgtgaaaacctgactacaccaacaatgctgaagaagaccttacagtgtctggaaggaatt catcttagccagtctggtgctgtgctaatgttgtatgtagataagcttatttgtactcca ttccgtgtgctggctcgtatggtggacacgcttgtttgtcggcgagtagagatgctgctg gctgagacgttccagaacagcattgctcagttaccagttgaagaactagaccgaatacaa caataccttcacagtaatggattagctcaaagacatcaaagactgtattccctgctggac aggttccgggctatgatcgcagaagacactgttagcccttcacccctggtttcatcacac ccactggatggagagaaaccactagaatccataattgttgacaaagaattctacttgtca ctagtgcaatctcagtgctgttgccgggcagattctgcactactggaatgcaccaagtta ttgaacaagcttcctcagcctgaactctactctatcatgacaacaaaggagttcaacctg agcttgttagctccctgtttgagtttcggtcttcatagtatgtctggagaacagggcagt gccttgtttgaaactgcttgtaaagtgactttagatcatgtcacgcacagtttgcagcat cttcctggcagtcatcaggtgtttcagccattgaagcccatgggtaacgtttcatactgg aacaagctgagtgatctatttggagatggtctgtattaccaaaccattgtcactctctgc cgtgccctggctcagtatctcacttccctctccaaacaaccagcagatgttcacattcca gttgataaagaagctgacatcactagatttattgtgctgtcactggaggcactgtcatgg cacttgatgaatgatcaggttcccctgagtgtagatttacaggctgcattggactgctgc tgtctggccctgcagcagcctgggatctggagcctgttggcttcagcagcgtatgtcacg caagcttgtactgtcattatctgcataaaatttatcgtggaagctggtacgtatgtggca tgggaacccgagtacattacaatagcgtgtgaagtgatggctgaaatggtggagagtcta cagtctgtcttgtgttttggccacagaaggaacaatagtatcccggcgttccttactcct atccttagaaatattaccattagcctagctaggctgcctcttgttaacagctacacgaga ttgcctccattggtctggaaattgggctggtccccaagagctggaggtgattttggtact tcattgcctgaaatccctgtggagttccttcaagagaaggacatattccgagagttcatc taccgcattaacactttgggatggacaaaccgcactcagtttgaggagacctgggcaaca cttttgggggtacttgtaacccagcctatagtaatggaccaagaagaagaacgtccacta gaggaagatacagagaggacccagattaacgtccttgcagtccaagcaataacatcttta gtgctaagcgcaatgacgctacctgttgcagggaatccagctgttagctgtctggaacag caaccacggaacaaaactttaaaagctctggacacaaggtttggaaggaagctgagcgtt atcagaggaattgtagaacgggaaatccaagctatggtatccaaaagagagaacattgca actcactatccatatcaggcttgggaccctgttccttctctctcacctgctacatcaggc aatcttgtctcccatgaaaagctgcttctgcagattaatatggaaagagagatgggcagt atggaatataaactgggacaggtatctattcactcagtatggcttggtaacagcatcaca ccattgagagaagaggaatgggatgaagatgaggaagatgagagtgatgtccctgctcct tcttcacctcagacctccccaataaactccagaaaacatcgtgctggggttgatatacac tcttgttcccagttcttgttggaactctacagtcagtggatattaccgtccaaccctggc aagaagtctccagccatcttgattagtgaagtggtgcgatcacttctggcagtgtcagat ctttttactgagcgaaatcagtttgaaatgatgtatacaacactgacagaattacagaaa ttccacccatctgaagatgagattcttaaccaatacctggtgccagcaatttgtaaggca gctgcagtccttggaatggataaggctatagcagagcctgtaagccgtttgttggagaca accctacgcagtacccacatgccgagccggattggagccctgcatggaattctctacgtc cttgagtgtgacttactggatgatacagcaaaacagctcattccaattattagtgattat ctagtatccaacctcagaggaattgcacactgtgtgaatgtccacaaccagcaacatgta ttagtgatgtgtgcagcagctttttatttgatcgagaactacccattggatgtaggccca gaattcactgctggaattatccagatgtgtggagtgatggtttctgggagtgaagaatca accccatcaatcatctaccactgcgtcttacgagggttagaacgccttctcctgtctgag cagctgtccaggctggatggagaggcactagtgaaactgagtgttgacagactcaacatg catagtcctcatagagccatggcagcactgggattgatgctgacttgcatgtatacaggt aaagagaaaagtagccctggacgaatatcaaacgctgatcccacagctccagacagtgag tctgttattgtggcaatggaacgggtgtcggttctttttgacaggattaggaagggcttt ccttgtgaggcacgagtagtggcacggattctcccacagtttttagatgacttcttccca ccgcaggatgtgatgaacaaggttattggagaatttctgtccaatcagcagccatatcca cagttcatggcaaatgttgtttacaaggtatttcagactttgcatactaccgggcagtcc tctatggttcgagattgggttatgctatcactctccaattttactcagaggacaccggtc gccatggcaatgtggagtctttcctgtttctttgtcagtgcttctaccagcccatgggtt tcagctctccttcctcacgttatcagcagaatgggaaaatcggaacaggtggatgtcaac cttttctgcttggtagccattgatttctacagacatcagattgatgaggagctggaccgc cgatccttccagtctgtttttgagattgtggcatctccaggaactccctatcaccgatta ctaacatgtttacaaagtctccaccagatcacacagctctga

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