Latimeria chalumnae (coelacanth): 102364116
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Entry
102364116 CDS
T02913
Symbol
SRF
Name
(RefSeq) serum response factor
KO
K04378
serum response factor
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102364116 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102364116 (SRF)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
102364116 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
102364116
NCBI-ProteinID:
XP_014344233
LinkDB
All DBs
Position
Un
AA seq
452 aa
AA seq
DB search
MGGVGVAAGPGARYEHEREGSMPVCSGSEADSDSGDEEDLGSERRGVKRGLSDLELGGGG
QEAGAVAAGFGAVTGGVVGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYE
LSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTMDQ
RMSATGFEETDLTYQVSECDSSGENKDTLKPAFTVTNLPGTTTSSNQTSATTSTTMQVSS
GATFPITNYLPPTSGTASPCVATSANGTVLKTSSAVASGSVMQLPSFTLMPGGAMAQQVP
VQTIQVHQPSQQNSSSSDSGTEITQTSTSGAVTLPATIMTSSVPTSMAGHMMYPSPHAVM
YASTPGLTDGGLAVLNAFSQAPSAMQVSHGQVQDQGGVPQVFLTAPPGTVQIPVSAVQLH
QMAVIGQQSSGGANLTELQVVNLDTAHSSKSD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgtaggagtggccgcggggccgggggcccggtatgagcacgagcgagaaggc
tccatgccagtgtgcagtggttctgaagccgattcggacagtggggacgaggaggatttg
gggagcgagaggcggggggtgaaacgggggctttcggacttggagctggggggtggcggg
caggaagcaggggctgtcgctgctggttttggggcagttacaggaggggttgtcggagcc
aaacccgggaagaagacgagaggaagggtaaagattaaaatggagtttattgacaacaaa
cttcgccgttacaccactttcagcaagaggaaaacgggcatcatgaaaaaggcctatgag
ttgtcgacgttgacagggacgcaggtcctgctccttgtggccagcgagacgggacatgtt
tacacgtttgccacccggaagctgcagcctatgatcaccagtgagacggggaaggctcta
atccagacctgcctaaactcgccagactcacctccccgctctgaccccaccatggaccag
cgcatgagcgcaacgggcttcgaggaaacggacctgacctaccaggtatcggagtgcgac
agcagcggcgagaacaaggacacgttgaaacctgccttcacagtcaccaacctgcctgga
accaccacctcttctaaccaaacatcagcgaccacatctaccaccatgcaggtcagcagc
ggtgccaccttccccatcaccaactacctgccacccacctcggggactgccagcccctgc
gtggctacaagtgccaatggcacagtcctcaaaacctcgagcgccgtggcctcgggcagc
gtgatgcagcttcccagcttcaccctcatgccagggggcgccatggcacagcaggtccca
gtacagacgattcaggtccaccagccgagtcagcagaattcttcctccagtgacagtggc
acggaaatcacacagacctctaccagtggggcagtgacactgccagcaacaataatgacc
tcctctgtgcctacgtcgatggcgggtcacatgatgtaccctagcccccacgccgtgatg
tatgcatccacaccaggcctgacggatggtggcctggcagtcctcaatgccttctcgcag
gccccctctgcaatgcaggtttctcatggacaagtacaagaccagggtggagtcccccag
gtgttcctcacagccccaccaggaaccgtccagatcccagtttcagctgtccagctgcat
cagatggcagtgattggtcagcagtccagtggtggcgctaacctgacggagcttcaagtc
gtgaatctggacacagcacacagcagcaagagcgactga
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