Latimeria chalumnae (coelacanth): 102364238
Help
Entry
102364238 CDS
T02913
Symbol
RABGEF1
Name
(RefSeq) RAB guanine nucleotide exchange factor 1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102364238 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102364238 (RABGEF1)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102364238 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
102364238 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Phasin
DS
Syntaxin
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
102364238
NCBI-ProteinID:
XP_005987567
Ensembl:
ENSLACG00000018835
UniProt:
H3BHR4
LinkDB
All DBs
Position
Un
AA seq
488 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEAAYASSKGAQSLTFSKFEEKKTNEKTRKVHTVKKFFSPSSRTVPKKEIQDARAP
SPSISRQTSVETDKVSKDFIEFLKNYHKAGQDVYKQCKLFIETMHHKKDLGIEEQTEFVQ
DFYQNMADRLQTRWKVSSERVEKIMDQIEKYIMTRLYKNVFCPETTDDEKKDLAVQKRIR
ALHWVTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIK
ITKNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAV
AFIEKLDAQSLNLSQEDFDRYMSGQMSPKKQDSEDWSPDVSPGVKQMYKNLNLLSQLNER
QDRIFTEAKKLEKDLIDWTEGITKKVQEIVEKYPLDIKPRSQPLAAIDSDNIEDDKLPPP
LQPQVFAG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaagtcggaacgcagaggaattcatgttgaccagtcggagcttctgtgtaaa
aaaggatgtggttactacgggaaccctgcctggcagggcttctgttccaaatgttggaga
gaggagtatcacaaggcgagacagaaacagattcaggaagattgggagctagctgaacgg
ttacagcgtgaggaagaagcagcttatgctagcagcaagggagctcagtcacttaccttt
tcaaaatttgaagagaagaaaaccaatgaaaagacccgtaaggttcacactgtgaaaaaa
ttcttcagtccctcttccaggactgtaccaaagaaagagatccaggatgctagggcccca
agcccttccataagtagacagaccagtgtagaaacagacaaagtatccaaagatttcatt
gagtttctcaagaactaccacaaagctggtcaggatgtgtacaaacagtgcaagttgttt
atagaaacaatgcatcataaaaaggacctgggtattgaagaacagacagagtttgtgcag
gacttctatcagaatatggccgacaggttacagactcgttggaaagtatcatctgagcga
gtggagaaaataatggatcagattgaaaaatacatcatgactcggttgtataaaaatgta
ttttgtccagaaacaactgatgatgagaagaaagacctagctgttcagaaaagaatccgg
gctttacactgggttactcctcagatgctatgtgttcctgtaaatgaagatatacctgaa
gtttctgatatggtggttaaggcaattacagacatcatcgaaatggattccaagcgggtc
ccccgtgataagttagcctgcatcaccaagtgtagcaagcatatctttaatgctataaag
atcacaaagaatgagccagcttctgctgatgacttcttaccgaccctaatctacattgtt
ttaaaggcaaaccctcctcgattacagtctaatatccaatatatcacccgcttctgtaac
cctagtaggctgatgacgggagaggatggatattatttcacaaatctgtgttgtgcagtg
gccttcattgaaaagctggatgcacagtcattgaatctgagccaagaggattttgatcgc
tatatgtcaggccagatgtctcccaagaagcaggactctgaggactggtcccctgatgtc
tccccaggtgtgaaacaaatgtacaaaaatttaaaccttttgtctcagctgaatgagagg
caagacaggattttcacagaggctaagaaattagaaaaggaccttatagactggactgaa
ggcatcacgaagaaggttcaagaaattgttgagaagtatccgctggatattaaaccgaga
agtcagcctttggcagccattgactcagacaacattgaagatgataaactgccacctcct
ttacaaccacaggtttttgcagggtaa
DBGET
integrated database retrieval system
