Latimeria chalumnae (coelacanth): 102364346
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Entry
102364346 CDS
T02913
Symbol
SPTBN4
Name
(RefSeq) spectrin beta, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102364346 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcm04812
]
102364346 (SPTBN4)
Cytoskeleton proteins [BR:
lcm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102364346 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
102364346 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
102364346
NCBI-ProteinID:
XP_014341369
LinkDB
All DBs
Position
Un
AA seq
2460 aa
AA seq
DB search
MATAATDLDNVDVQRQCNNNNRWENAEHGWDESTATAKLFECSRIKALAALSLQPKPTRG
RMRIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIET
EDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLIDFTKLT
KSNATFNLQQAFNSAEQHLGLTKLLDPEGIYFFFVLEKAIEIEKIIERYESLASELLEWI
ERTISIISNQRFAKSLAGVQQQLQAFTAYCTLEKPIYFYSYGESQWFCYSQLRXIFSCKR
CRFRSLXAADCFVIPQAWERLEKAEHEREVALRNELIRQEKLELLAQRFDHKATMRETWL
NENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVIVELASEMETESYYDIKR
INAQKDNILRQWTLLTELVGSRRSRLEMNLSLQKIFQEMVYMIDWMEEMQVLLLSKDFGK
HLLEVDDLLQKHGLLEADITVQVDRVQALNTAALKFTEVKGYKPCDPEVICNRVNHVNTC
LEELRQLAAKRRAELEESRQLWAFFQEMEEAEGWIREKEQILCSQSYGKDVSSVLRLVNK
HKILTGEIGGRRSLLQQTMKKGEQILAKKHFGTGNIQEKIREVRMQWKSLEEFAVLHQEK
LREAMNFYQFTAETDDLVAWLQDTYRIVSSDDFGHDEYSTQSLMKKHRRVNDGIEKHQVA
VVALRKQHAVLAPLYREVVEVQIRIAEVEQLYSEVAEVSVLRRQWLQDALAVYRMFSEVN
ACEVWIDEKEQWLNKMEIPEKLEDVEVIQHRFESLDQEMNSLMGRILDVNQIVQQLVDGG
HPSSAEVRSCQDHLNGRWNRIVELVEHKKNHLNSILRIQNYLLECNEIKSQICEKRKAIE
TTQYSSSNLGGVLSLQRKLSTMEAALVVIEPKLLELQQEAELLATSHPAQAVEILLQFEE
ISEEWEALKRTLQGCEDSLTVATRLQQFIQDLDNFLTWLVKTQTAVTSEDLPNTLEEAEF
LLNQHAALKEEISHYEEDYKKIQAVNELLAVEEAELPYISLQQWLQKLDVGWTKLLQMWD
SRREVLVQSHLFHLFLRDVKQAESFLNNQVCRDCRLDTQSKVQHDSGQVRAVIIEFSCAA
VLRSDHYSHTDDSRGQSFQPCLCFLQLDDWINEKMLMARDTSRDEAQKLHKKWLKHQAFM
AELAQNKEWLDKLEKEGQQLIQEKPELTSVVKKKLEEIHQCWVELESTTQAKAKQLFETN
KADLLVQSYTDLDKRLTQLEGQLQQVDHGKDLTSVNKQLKKLQSMESQMEDWYKEVGELQ
VQAATLPLQGTSRESVSEKQSSVGARIVHLIEPLKERRRLLLASKEVHQVGLDLEDEINW
VQERLPLAASKEHGTNLQLVQQLMKKNQSLQREIQVHKPRVDDVLERAGLIASIKSPEAD
SVRANLERLRELWDMLKVEAEQRQRRLDAMYQVEQYYFDVGEVEAWLSEQELLMMNEEKG
KDEQSTLQLLKKHMTVEQTIENYAETIAQLSRQCRALLEIGHPDSEQISKRQSQIDRLYV
SLKDLVEERKGKLEQQYWLYQLNREVDELEQWIAEREVVAGSPELGQDYEHVTLLQEKFT
EFASETGSIGQERVSAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELMETRAQML
AASHELHKFFNDCKDVLGQIEDKQKQLPEVTGRGTSTSTGALQRLFSSFEHDIQVLVTQV
RQLQENAAQLRTVYAGENAEAIAVKEQEVVRAWKELLSTCDDCRLQITTTTDKMRFFAMV
RDLISWMDNIICQVGTEEKPRDVSSVEVLMNYHQGLKNEIEARDKNILMCLDLGKALILN
GNPASEEVKEKLETLNAKRKEMTEKWEKHWECLHQMLEVNQFAQEAVVAEAWLTAQEPLI
KSQELGNSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTLEKLKAEQSKQPATPFLGR
KFTESVDIAPRSSPLLRKAIYEPKDLRPERQDDTKLLDAQPMVNGIKYEPQDFRPERLEP
QIAYVRKEHKPERLQPKIDLLQDTEKYGPEPPTPQHHGLKVEAFDAKVAVQEGTRPERLE
RRLSQQELVKEVVDGTLEQAAAWKDRQEGQPARQPERRRERHDRRLERQESSEQEAPRHE
QTEQRRHDRHERRLEKQESSEQETPRHEQMERRRERHERRLERQDSSEQETPRHDLSDKR
AGDKKTTLADIVEQLQEKEAAQVRDPASRLPNGIDKLPEYTPRPDRPRARDRPKPRRRPR
PKDPNQPPGEARRSRSAPAQSSAPPPPPPTHTVQQEGFLFRKHELEARNKKASNRSWANL
YCIISKGDLGFYKDVKSQSSGATYNGEPLINLHNGVCEVANDYKKKKNVFKLKANDGGEF
LFHAKDEEEMKNWMKAISTAVSEHAEIAKWGQTLPTTSSTDEGNPRRDADHKSSASAKKK
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcagccactgacctggataatgtagatgtccagcgacaatgcaacaacaac
aaccgctgggagaatgcggaacacggctgggacgagtccacagctacagccaagctcttc
gagtgctcaagaatcaaggcgctagctgccctctccctgcagccgaagccgacccgaggt
agaatgaggattcacagcctggagaacgtggacaaagccctccagttcctgaaggagcag
cgagttcacctggagaacgtagggtctcatgacattgtggatggaaatcatcgcctcact
cttgggctcatctggacaattatcctccggtttcagatccaggttatcaaaatagaaacg
gaagataatcgggagactcgttcggccaaggatgccctcctgctgtggtgtcagatgaag
actgcaggctacccagaagtgaacattcagaactttacaactagctggagggatgggctt
gcctttaacgcactgattcataggcacaggccagatttgattgatttcaccaagctgaca
aaatctaatgcaacgtttaacctgcagcaagcgtttaactcagcagaacagcaccttggc
cttactaaactgctcgacccagaaggtatctattttttttttgtcctggagaaggccatc
gagattgagaagattatagagcggtacgaatccctggcgtctgaactcctagagtggatt
gagcgcaccatcagcatcatcagcaatcagagattcgccaagtcgctggccggagtgcaa
cagcagctacaggcgtttactgcctactgtacactggagaagccaatctatttttattca
tatggagagtctcaatggttttgttatagtcagttgaggtgaattttttcttgtaaacgt
tgccgcttccgttccctttaagctgcagactgctttgttattccgcaggcctgggagcga
ctggagaaagccgaacatgagcgagaggtggcgttgcggaacgagctcatccgacaagag
aagctggagttgctggcgcagcggtttgaccacaaggcaacgatgcgagagacgtggctg
aatgagaaccagcggctggtctcccaggataactttggctacgacttgcctgctgtggaa
gcggctatgaagaagcacgaagccattgaggcggacatctcctcctaccaagagcgcatc
caggtgattgtggagctggcctcagaaatggagaccgagagctactatgatatcaagagg
atcaatgctcagaaggacaacatcctgagacagtggactctgctgacagagctggtgggg
tcgcggcgcagccggctggagatgaacctcagtctccagaagatcttccaggagatggtc
tacatgatcgactggatggaggaaatgcaggtgctgttgctctcaaaagatttcggaaag
cacctgttggaggtggatgatctgctgcagaaacacggactgctggaagccgacatcact
gtgcaggttgacagggttcaggctcttaacacagctgctctcaagtttactgaggtcaag
ggttacaagccatgtgatcctgaagtgatctgcaatcgagttaaccatgtcaacacctgc
ttagaggaactccgccagctagcagccaaacggcgtgcggagctggaagagtctcgccag
ctctgggcgttttttcaggagatggaggaagcagaaggctggatccgtgaaaaagagcag
atcctctgctcccagagctatggaaaggacgtgagcagcgttttgagactggtgaacaag
cataagattctgacgggagaaatagggggcagacggtcccttcttcaacaaacaatgaag
aagggggagcagatcttggccaagaagcactttggaacgggaaacattcaagagaaaatt
agggaggtcagaatgcagtggaagagcttagaagaatttgcagtccttcaccaggaaaag
cttcgagaggcgatgaacttctaccagtttactgcggagacggatgacttagtggcctgg
cttcaggatacgtatcgtattgtctcaagtgatgactttggccacgatgagtactcaacg
cagtctttgatgaagaagcacaggagagtcaacgacgggatagagaagcaccaagtagct
gtggtggccctaaggaagcaacacgcggttttggcacctttgtaccgggaggtggtggag
gtccagataagaatagcggaggtggagcagctctacagtgaggtggctgaggtttctgta
ctgagaaggcaatggctccaggatgctttggccgtctataggatgtttagtgaagtgaat
gcttgtgaggtctggattgatgaaaaggaacagtggctgaacaaaatggagattccagag
aaactggaggatgtagaggtaatacaacataggtttgagagcttggaccaggaaatgaac
agtctgatgggccgtatcctggatgtgaatcagatagtccagcagcttgtggatggaggc
catccaagctccgcagaggtcagaagttgccaggaccacctgaatggcaggtggaaccga
attgttgagctagttgaacacaagaagaaccacctgaactccatcttacgcattcagaat
tacctactggaatgcaatgagatcaaatcccagatctgtgagaagaggaaagcaattgag
accacgcagtacagcagcagcaaccttggaggggtgctgagccttcagaggaagctgtct
accatggaggcagcgctggttgttatcgaacccaagctgttggagctccaacaggaggca
gagctcttggccacctcccaccctgcccaagctgtggaaatcctcctgcagtttgaagaa
ataagcgaggagtgggaggcgttgaagaggacccttcaagggtgtgaggactccctcacc
gtagccactagactgcagcagttcatacaggacttggacaatttcctgacttggttggtg
aaaacccaaactgctgtcacatctgaagacttgcccaatactctggaagaggctgagttt
ctcctcaaccagcatgcggctctcaaagaggagatcagtcactatgaggaggattacaaa
aagatccaagcagtgaatgagctcctcgccgtggaagaggcagaactcccttacatctcc
cttcagcaatggctgcagaaactggacgtgggatggacaaagttactgcagatgtgggac
agcagaagggaggtcctcgtgcagtcacacctcttccatctctttctacgtgacgtcaag
caagcagaatcctttctcaacaatcaggtatgcagggactgtaggttagatacgcagagc
aaagtgcagcacgatagcggtcaagttagagcggtcatcatagagttttcttgtgctgct
gttctaagaagtgatcactacagtcacacggatgattcaagggggcagtcatttcaaccg
tgtctctgtttccttcagctggacgactggattaacgagaagatgctgatggcgagggac
acgtcgcgggacgaggctcagaaactgcacaaaaaatggcttaagcaccaagcgtttatg
gcggaactggcccagaataaagaatggttggacaaactcgaaaaggagggtcagcagctg
atccaagagaaacctgagctgacttctgtcgtgaagaagaaactggaggagatccaccag
tgttgggttgagcttgagtccaccacccaagccaaagccaagcagctgtttgaaaccaac
aaggccgacctgctggtgcagagctacacggacttggacaagcgcctgacgcagctggaa
gggcagcttcaacaagtggatcatgggaaggacctgaccagcgtcaacaagcaactaaag
aaactgcagagtatggagagccagatggaagactggtataaagaggtgggggagctgcag
gtgcaagcggcaaccctcccattgcaagggaccagcagggagagcgtctccgagaagcag
agctccgtaggggcgaggatcgtgcatcttatcgagcctctgaaagaaaggagacgtctt
ctcctggcttccaaagaggtccaccaggttggcctagatctagaggatgaaattaactgg
gttcaagagaggctgccgctggccgcgtcaaaggaacatggaaccaacctgcagctcgta
cagcaactcatgaagaagaaccagtctctgcagcgagaaatacaagtccacaagccacgg
gtcgatgacgtcctggagcgggcaggactgatcgcgtcgataaagagcccggaggcggac
tcggtgcgagcaaacctggagaggctgagggaattgtgggatatgctgaaggtggaggca
gagcagcggcagcggcggctggacgccatgtatcaggtggaacagtactacttcgacgtg
ggcgaagtggaagcttggcttagcgaacaggagctgctgatgatgaacgaggagaaagga
aaggacgaacagagcaccttgcagctgctgaagaaacacatgactgtggaacagaccatc
gagaactacgcagaaaccattgcccagctgtccaggcagtgtagggctctgctggaaatc
ggccaccccgatagcgagcagatcagtaaacggcagtctcaaatcgaccggctctacgtg
tctctgaaggacctggtggaggagcggaaggggaagttggagcagcagtactggctgtac
cagctgaaccgggaggtggacgagctggagcagtggatcgcagagagggaggtggtggcg
gggtctcccgaactcggacaggactatgagcacgtcacgttactgcaggagaagttcacg
gagtttgccagtgagactggcagcatcgggcaggagcgggtctctgccgtcaaccagatg
gtggatgagctgatcgattacgggcactcagacgcagccaccattgccgaatggaaggat
ggggtgaatgaggcctgggctgacctcctggagctgatggagacgcgggcccagatgctg
gccgcctcccatgagctacacaagttctttaatgactgcaaggacgtcctgggtcagatc
gaggacaagcagaagcagctgcctgaggttaccggacggggcacaagcacttccactggg
gccctccagagactcttcagctcattcgaacacgacatccaagtactggtcacacaggta
cgacagttacaagagaacgctgcccagctgcggaccgtgtacgctggcgagaacgcagag
gccatcgccgttaaagaacaggaagtagtccgagcttggaaggagctgctgagtacctgt
gatgactgccggctccagatcaccacgaccaccgacaagatgcggttcttcgccatggtg
cgggacctcatctcctggatggacaacatcatctgtcaggtcggcacggaggaaaaacca
agagacgtgtcttcagtggaggtgctaatgaattatcaccaaggcttgaagaatgaaatt
gaagctcgagataagaacatattgatgtgtttggacctggggaaggcgctgatactcaat
gggaaccccgcttccgaggaggtgaaggaaaagttagagactctaaatgcaaaacggaaa
gagatgactgaaaaatgggaaaaacactgggaatgtctccatcaaatgctggaagtgaac
cagtttgcccaggaagcggttgtggcagaggcgtggctcactgcccaggagcctttgata
aaaagccaagagctgggaaacagcgtggacgaggtggagcagctgatccgccgccatgag
gcgttccgcaaagcggccgcagcctgggaggagcgattcagctcgttacgacggcttacc
acgctggagaaactgaaagctgaacagagcaagcagcctgcgactccatttcttggaagg
aagttcaccgagtctgtggacatcgcgccaagatcttccccacttctacgaaaggcaatt
tatgaaccaaaagatctcaggccagaaagacaagatgacaccaagttgttagatgctcag
ccgatggtcaacggaataaagtatgagccacaggattttaggcccgagagactagagccc
caaattgcctatgtacggaaagagcataaacccgaacgcttacagccaaaaattgatctt
ctccaggacactgagaaatatggaccagaaccaccgaccccacagcatcatggactcaag
gttgaagcatttgatgccaaagtggcagttcaggaggggacaagacctgaaaggcttgag
cgcaggctttctcagcaggagttggtcaaggaagttgtcgatgggactttggagcaagcc
gcggcatggaaggacagacaggaaggccagccggccagacagccggagcgaaggcgagag
cggcacgaccggaggctggaaaggcaagagtccagcgagcaggaagccccgaggcacgag
cagacagagcagcggaggcacgaccgccacgaacggaggctagagaagcaagagtcaagt
gaacaggaaactccaagacatgagcaaatggagaggagacgggaacgccatgagcgaagg
ctagaaagacaagactcgagtgagcaagagactccaaggcatgacctctctgacaagcga
gcgggtgataagaaaaccactctggcggacattgttgaacagctacaggagaaagaagca
gctcaggttcgtgatcctgcatcccgccttcccaatggaattgataagcttcccgaatac
acgccgagacccgacaggcctcgagccagggatagacccaagccgaggcggagaccccgg
cctaaggaccccaaccagccgccaggagaagctcgccggtcgcgctcggcaccagcgcaa
agcagcgccccccctccgccgccaccaacacacaccgttcagcaggagggcttcctcttc
cgaaaacacgagcttgaggcccgaaacaaaaaggcttcaaacaggtcctgggcaaacctg
tactgcattatcagtaaaggagatttaggattctacaaggatgtgaaaagccagagttcc
ggagcaacatataacggagaacctttaatcaatctccacaatggagtatgtgaggttgct
aacgattataagaaaaagaagaatgtgtttaagttgaaggcaaatgacggcggtgaattt
ttgttccacgcaaaggatgaggaggaaatgaagaactggatgaaggccatctccacggcc
gtgtccgagcatgcggagatagcgaaatggggccagacccttcctactacctcttcaact
gacgaggggaaccccaggcgggacgcagaccacaaatcgagcgcgtctgcgaagaagaaa
tga
DBGET
integrated database retrieval system
