Latimeria chalumnae (coelacanth): 102364346
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Entry
102364346 CDS
T02913
Symbol
SPTBN4
Name
(RefSeq) spectrin beta, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04517
IgSF CAM signaling
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102364346 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102364346 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcm04812
]
102364346 (SPTBN4)
Cytoskeleton proteins [BR:
lcm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102364346 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
102364346 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
102364346
NCBI-ProteinID:
XP_014341369
LinkDB
All DBs
Position
Un
AA seq
2460 aa
AA seq
DB search
MATAATDLDNVDVQRQCNNNNRWENAEHGWDESTATAKLFECSRIKALAALSLQPKPTRG
RMRIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIET
EDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLIDFTKLT
KSNATFNLQQAFNSAEQHLGLTKLLDPEGIYFFFVLEKAIEIEKIIERYESLASELLEWI
ERTISIISNQRFAKSLAGVQQQLQAFTAYCTLEKPIYFYSYGESQWFCYSQLRXIFSCKR
CRFRSLXAADCFVIPQAWERLEKAEHEREVALRNELIRQEKLELLAQRFDHKATMRETWL
NENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVIVELASEMETESYYDIKR
INAQKDNILRQWTLLTELVGSRRSRLEMNLSLQKIFQEMVYMIDWMEEMQVLLLSKDFGK
HLLEVDDLLQKHGLLEADITVQVDRVQALNTAALKFTEVKGYKPCDPEVICNRVNHVNTC
LEELRQLAAKRRAELEESRQLWAFFQEMEEAEGWIREKEQILCSQSYGKDVSSVLRLVNK
HKILTGEIGGRRSLLQQTMKKGEQILAKKHFGTGNIQEKIREVRMQWKSLEEFAVLHQEK
LREAMNFYQFTAETDDLVAWLQDTYRIVSSDDFGHDEYSTQSLMKKHRRVNDGIEKHQVA
VVALRKQHAVLAPLYREVVEVQIRIAEVEQLYSEVAEVSVLRRQWLQDALAVYRMFSEVN
ACEVWIDEKEQWLNKMEIPEKLEDVEVIQHRFESLDQEMNSLMGRILDVNQIVQQLVDGG
HPSSAEVRSCQDHLNGRWNRIVELVEHKKNHLNSILRIQNYLLECNEIKSQICEKRKAIE
TTQYSSSNLGGVLSLQRKLSTMEAALVVIEPKLLELQQEAELLATSHPAQAVEILLQFEE
ISEEWEALKRTLQGCEDSLTVATRLQQFIQDLDNFLTWLVKTQTAVTSEDLPNTLEEAEF
LLNQHAALKEEISHYEEDYKKIQAVNELLAVEEAELPYISLQQWLQKLDVGWTKLLQMWD
SRREVLVQSHLFHLFLRDVKQAESFLNNQVCRDCRLDTQSKVQHDSGQVRAVIIEFSCAA
VLRSDHYSHTDDSRGQSFQPCLCFLQLDDWINEKMLMARDTSRDEAQKLHKKWLKHQAFM
AELAQNKEWLDKLEKEGQQLIQEKPELTSVVKKKLEEIHQCWVELESTTQAKAKQLFETN
KADLLVQSYTDLDKRLTQLEGQLQQVDHGKDLTSVNKQLKKLQSMESQMEDWYKEVGELQ
VQAATLPLQGTSRESVSEKQSSVGARIVHLIEPLKERRRLLLASKEVHQVGLDLEDEINW
VQERLPLAASKEHGTNLQLVQQLMKKNQSLQREIQVHKPRVDDVLERAGLIASIKSPEAD
SVRANLERLRELWDMLKVEAEQRQRRLDAMYQVEQYYFDVGEVEAWLSEQELLMMNEEKG
KDEQSTLQLLKKHMTVEQTIENYAETIAQLSRQCRALLEIGHPDSEQISKRQSQIDRLYV
SLKDLVEERKGKLEQQYWLYQLNREVDELEQWIAEREVVAGSPELGQDYEHVTLLQEKFT
EFASETGSIGQERVSAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELMETRAQML
AASHELHKFFNDCKDVLGQIEDKQKQLPEVTGRGTSTSTGALQRLFSSFEHDIQVLVTQV
RQLQENAAQLRTVYAGENAEAIAVKEQEVVRAWKELLSTCDDCRLQITTTTDKMRFFAMV
RDLISWMDNIICQVGTEEKPRDVSSVEVLMNYHQGLKNEIEARDKNILMCLDLGKALILN
GNPASEEVKEKLETLNAKRKEMTEKWEKHWECLHQMLEVNQFAQEAVVAEAWLTAQEPLI
KSQELGNSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTLEKLKAEQSKQPATPFLGR
KFTESVDIAPRSSPLLRKAIYEPKDLRPERQDDTKLLDAQPMVNGIKYEPQDFRPERLEP
QIAYVRKEHKPERLQPKIDLLQDTEKYGPEPPTPQHHGLKVEAFDAKVAVQEGTRPERLE
RRLSQQELVKEVVDGTLEQAAAWKDRQEGQPARQPERRRERHDRRLERQESSEQEAPRHE
QTEQRRHDRHERRLEKQESSEQETPRHEQMERRRERHERRLERQDSSEQETPRHDLSDKR
AGDKKTTLADIVEQLQEKEAAQVRDPASRLPNGIDKLPEYTPRPDRPRARDRPKPRRRPR
PKDPNQPPGEARRSRSAPAQSSAPPPPPPTHTVQQEGFLFRKHELEARNKKASNRSWANL
YCIISKGDLGFYKDVKSQSSGATYNGEPLINLHNGVCEVANDYKKKKNVFKLKANDGGEF
LFHAKDEEEMKNWMKAISTAVSEHAEIAKWGQTLPTTSSTDEGNPRRDADHKSSASAKKK
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcagccactgacctggataatgtagatgtccagcgacaatgcaacaacaac
aaccgctgggagaatgcggaacacggctgggacgagtccacagctacagccaagctcttc
gagtgctcaagaatcaaggcgctagctgccctctccctgcagccgaagccgacccgaggt
agaatgaggattcacagcctggagaacgtggacaaagccctccagttcctgaaggagcag
cgagttcacctggagaacgtagggtctcatgacattgtggatggaaatcatcgcctcact
cttgggctcatctggacaattatcctccggtttcagatccaggttatcaaaatagaaacg
gaagataatcgggagactcgttcggccaaggatgccctcctgctgtggtgtcagatgaag
actgcaggctacccagaagtgaacattcagaactttacaactagctggagggatgggctt
gcctttaacgcactgattcataggcacaggccagatttgattgatttcaccaagctgaca
aaatctaatgcaacgtttaacctgcagcaagcgtttaactcagcagaacagcaccttggc
cttactaaactgctcgacccagaaggtatctattttttttttgtcctggagaaggccatc
gagattgagaagattatagagcggtacgaatccctggcgtctgaactcctagagtggatt
gagcgcaccatcagcatcatcagcaatcagagattcgccaagtcgctggccggagtgcaa
cagcagctacaggcgtttactgcctactgtacactggagaagccaatctatttttattca
tatggagagtctcaatggttttgttatagtcagttgaggtgaattttttcttgtaaacgt
tgccgcttccgttccctttaagctgcagactgctttgttattccgcaggcctgggagcga
ctggagaaagccgaacatgagcgagaggtggcgttgcggaacgagctcatccgacaagag
aagctggagttgctggcgcagcggtttgaccacaaggcaacgatgcgagagacgtggctg
aatgagaaccagcggctggtctcccaggataactttggctacgacttgcctgctgtggaa
gcggctatgaagaagcacgaagccattgaggcggacatctcctcctaccaagagcgcatc
caggtgattgtggagctggcctcagaaatggagaccgagagctactatgatatcaagagg
atcaatgctcagaaggacaacatcctgagacagtggactctgctgacagagctggtgggg
tcgcggcgcagccggctggagatgaacctcagtctccagaagatcttccaggagatggtc
tacatgatcgactggatggaggaaatgcaggtgctgttgctctcaaaagatttcggaaag
cacctgttggaggtggatgatctgctgcagaaacacggactgctggaagccgacatcact
gtgcaggttgacagggttcaggctcttaacacagctgctctcaagtttactgaggtcaag
ggttacaagccatgtgatcctgaagtgatctgcaatcgagttaaccatgtcaacacctgc
ttagaggaactccgccagctagcagccaaacggcgtgcggagctggaagagtctcgccag
ctctgggcgttttttcaggagatggaggaagcagaaggctggatccgtgaaaaagagcag
atcctctgctcccagagctatggaaaggacgtgagcagcgttttgagactggtgaacaag
cataagattctgacgggagaaatagggggcagacggtcccttcttcaacaaacaatgaag
aagggggagcagatcttggccaagaagcactttggaacgggaaacattcaagagaaaatt
agggaggtcagaatgcagtggaagagcttagaagaatttgcagtccttcaccaggaaaag
cttcgagaggcgatgaacttctaccagtttactgcggagacggatgacttagtggcctgg
cttcaggatacgtatcgtattgtctcaagtgatgactttggccacgatgagtactcaacg
cagtctttgatgaagaagcacaggagagtcaacgacgggatagagaagcaccaagtagct
gtggtggccctaaggaagcaacacgcggttttggcacctttgtaccgggaggtggtggag
gtccagataagaatagcggaggtggagcagctctacagtgaggtggctgaggtttctgta
ctgagaaggcaatggctccaggatgctttggccgtctataggatgtttagtgaagtgaat
gcttgtgaggtctggattgatgaaaaggaacagtggctgaacaaaatggagattccagag
aaactggaggatgtagaggtaatacaacataggtttgagagcttggaccaggaaatgaac
agtctgatgggccgtatcctggatgtgaatcagatagtccagcagcttgtggatggaggc
catccaagctccgcagaggtcagaagttgccaggaccacctgaatggcaggtggaaccga
attgttgagctagttgaacacaagaagaaccacctgaactccatcttacgcattcagaat
tacctactggaatgcaatgagatcaaatcccagatctgtgagaagaggaaagcaattgag
accacgcagtacagcagcagcaaccttggaggggtgctgagccttcagaggaagctgtct
accatggaggcagcgctggttgttatcgaacccaagctgttggagctccaacaggaggca
gagctcttggccacctcccaccctgcccaagctgtggaaatcctcctgcagtttgaagaa
ataagcgaggagtgggaggcgttgaagaggacccttcaagggtgtgaggactccctcacc
gtagccactagactgcagcagttcatacaggacttggacaatttcctgacttggttggtg
aaaacccaaactgctgtcacatctgaagacttgcccaatactctggaagaggctgagttt
ctcctcaaccagcatgcggctctcaaagaggagatcagtcactatgaggaggattacaaa
aagatccaagcagtgaatgagctcctcgccgtggaagaggcagaactcccttacatctcc
cttcagcaatggctgcagaaactggacgtgggatggacaaagttactgcagatgtgggac
agcagaagggaggtcctcgtgcagtcacacctcttccatctctttctacgtgacgtcaag
caagcagaatcctttctcaacaatcaggtatgcagggactgtaggttagatacgcagagc
aaagtgcagcacgatagcggtcaagttagagcggtcatcatagagttttcttgtgctgct
gttctaagaagtgatcactacagtcacacggatgattcaagggggcagtcatttcaaccg
tgtctctgtttccttcagctggacgactggattaacgagaagatgctgatggcgagggac
acgtcgcgggacgaggctcagaaactgcacaaaaaatggcttaagcaccaagcgtttatg
gcggaactggcccagaataaagaatggttggacaaactcgaaaaggagggtcagcagctg
atccaagagaaacctgagctgacttctgtcgtgaagaagaaactggaggagatccaccag
tgttgggttgagcttgagtccaccacccaagccaaagccaagcagctgtttgaaaccaac
aaggccgacctgctggtgcagagctacacggacttggacaagcgcctgacgcagctggaa
gggcagcttcaacaagtggatcatgggaaggacctgaccagcgtcaacaagcaactaaag
aaactgcagagtatggagagccagatggaagactggtataaagaggtgggggagctgcag
gtgcaagcggcaaccctcccattgcaagggaccagcagggagagcgtctccgagaagcag
agctccgtaggggcgaggatcgtgcatcttatcgagcctctgaaagaaaggagacgtctt
ctcctggcttccaaagaggtccaccaggttggcctagatctagaggatgaaattaactgg
gttcaagagaggctgccgctggccgcgtcaaaggaacatggaaccaacctgcagctcgta
cagcaactcatgaagaagaaccagtctctgcagcgagaaatacaagtccacaagccacgg
gtcgatgacgtcctggagcgggcaggactgatcgcgtcgataaagagcccggaggcggac
tcggtgcgagcaaacctggagaggctgagggaattgtgggatatgctgaaggtggaggca
gagcagcggcagcggcggctggacgccatgtatcaggtggaacagtactacttcgacgtg
ggcgaagtggaagcttggcttagcgaacaggagctgctgatgatgaacgaggagaaagga
aaggacgaacagagcaccttgcagctgctgaagaaacacatgactgtggaacagaccatc
gagaactacgcagaaaccattgcccagctgtccaggcagtgtagggctctgctggaaatc
ggccaccccgatagcgagcagatcagtaaacggcagtctcaaatcgaccggctctacgtg
tctctgaaggacctggtggaggagcggaaggggaagttggagcagcagtactggctgtac
cagctgaaccgggaggtggacgagctggagcagtggatcgcagagagggaggtggtggcg
gggtctcccgaactcggacaggactatgagcacgtcacgttactgcaggagaagttcacg
gagtttgccagtgagactggcagcatcgggcaggagcgggtctctgccgtcaaccagatg
gtggatgagctgatcgattacgggcactcagacgcagccaccattgccgaatggaaggat
ggggtgaatgaggcctgggctgacctcctggagctgatggagacgcgggcccagatgctg
gccgcctcccatgagctacacaagttctttaatgactgcaaggacgtcctgggtcagatc
gaggacaagcagaagcagctgcctgaggttaccggacggggcacaagcacttccactggg
gccctccagagactcttcagctcattcgaacacgacatccaagtactggtcacacaggta
cgacagttacaagagaacgctgcccagctgcggaccgtgtacgctggcgagaacgcagag
gccatcgccgttaaagaacaggaagtagtccgagcttggaaggagctgctgagtacctgt
gatgactgccggctccagatcaccacgaccaccgacaagatgcggttcttcgccatggtg
cgggacctcatctcctggatggacaacatcatctgtcaggtcggcacggaggaaaaacca
agagacgtgtcttcagtggaggtgctaatgaattatcaccaaggcttgaagaatgaaatt
gaagctcgagataagaacatattgatgtgtttggacctggggaaggcgctgatactcaat
gggaaccccgcttccgaggaggtgaaggaaaagttagagactctaaatgcaaaacggaaa
gagatgactgaaaaatgggaaaaacactgggaatgtctccatcaaatgctggaagtgaac
cagtttgcccaggaagcggttgtggcagaggcgtggctcactgcccaggagcctttgata
aaaagccaagagctgggaaacagcgtggacgaggtggagcagctgatccgccgccatgag
gcgttccgcaaagcggccgcagcctgggaggagcgattcagctcgttacgacggcttacc
acgctggagaaactgaaagctgaacagagcaagcagcctgcgactccatttcttggaagg
aagttcaccgagtctgtggacatcgcgccaagatcttccccacttctacgaaaggcaatt
tatgaaccaaaagatctcaggccagaaagacaagatgacaccaagttgttagatgctcag
ccgatggtcaacggaataaagtatgagccacaggattttaggcccgagagactagagccc
caaattgcctatgtacggaaagagcataaacccgaacgcttacagccaaaaattgatctt
ctccaggacactgagaaatatggaccagaaccaccgaccccacagcatcatggactcaag
gttgaagcatttgatgccaaagtggcagttcaggaggggacaagacctgaaaggcttgag
cgcaggctttctcagcaggagttggtcaaggaagttgtcgatgggactttggagcaagcc
gcggcatggaaggacagacaggaaggccagccggccagacagccggagcgaaggcgagag
cggcacgaccggaggctggaaaggcaagagtccagcgagcaggaagccccgaggcacgag
cagacagagcagcggaggcacgaccgccacgaacggaggctagagaagcaagagtcaagt
gaacaggaaactccaagacatgagcaaatggagaggagacgggaacgccatgagcgaagg
ctagaaagacaagactcgagtgagcaagagactccaaggcatgacctctctgacaagcga
gcgggtgataagaaaaccactctggcggacattgttgaacagctacaggagaaagaagca
gctcaggttcgtgatcctgcatcccgccttcccaatggaattgataagcttcccgaatac
acgccgagacccgacaggcctcgagccagggatagacccaagccgaggcggagaccccgg
cctaaggaccccaaccagccgccaggagaagctcgccggtcgcgctcggcaccagcgcaa
agcagcgccccccctccgccgccaccaacacacaccgttcagcaggagggcttcctcttc
cgaaaacacgagcttgaggcccgaaacaaaaaggcttcaaacaggtcctgggcaaacctg
tactgcattatcagtaaaggagatttaggattctacaaggatgtgaaaagccagagttcc
ggagcaacatataacggagaacctttaatcaatctccacaatggagtatgtgaggttgct
aacgattataagaaaaagaagaatgtgtttaagttgaaggcaaatgacggcggtgaattt
ttgttccacgcaaaggatgaggaggaaatgaagaactggatgaaggccatctccacggcc
gtgtccgagcatgcggagatagcgaaatggggccagacccttcctactacctcttcaact
gacgaggggaaccccaggcgggacgcagaccacaaatcgagcgcgtctgcgaagaagaaa
tga
DBGET
integrated database retrieval system
