KEGG   Latimeria chalumnae (coelacanth): 102364423
Entry
102364423         CDS       T02913                                 
Symbol
USP1
Name
(RefSeq) ubiquitin specific peptidase 1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    102364423 (USP1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcm01002]
    102364423 (USP1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcm04121]
    102364423 (USP1)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102364423 (USP1)
Enzymes [BR:lcm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     102364423 (USP1)
Peptidases and inhibitors [BR:lcm01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   102364423 (USP1)
Ubiquitin system [BR:lcm04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    102364423 (USP1)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     102364423 (USP1)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 102364423
NCBI-ProteinID: XP_006010499
Ensembl: ENSLACG00000001641
LinkDB
Position
Un
AA seq 783 aa
MILCSKHADFDLFAFTVYLFCSHIFFLFVHFFCSCDQAVPTVQSISPDVCEKRENLLPFV
GLSNLGNTCYLNSVLQVLYYYPGFKAGMKHLFNIISKKKEKFKSEEDQKDERETSPEDMP
ASYELVCNLNSLIVSIEKLQISYLKNPEKYTGELATQPRRLLNTLRELNPMYEGYLQHDA
QEVLQCILGYIQEVCQKLKEEEKNAVVEGESAQSNNIAGNEINGRAEQPSTVDSEPENKS
EIEEQNEPSASLPEEKMRKRGTGKRSSDTEAGNAKKKSKVIKDQKVALEAKTCARSKRKP
SGDGSDSPADSDIKICVENSIARPLQKKSRLGLGFFKSSGKQPSILSKFCSLGKLTTSLG
HKGQTKVTEEEEPHPNSLKCGSNSCSVPECSGRCTAEISSERIEEKAIKSHELNELELME
RLFQGQLVLRTRCLECECFTERREDFQDISVPVQENEPSEVEDGSKISPEPKIERKTLRW
AISQFASVERIVGEDKYFCESCHHYTEAERSLLFDKMPDVITIHLKCFAANSSEFDCYGG
LSKVNTPLLTPLKLSLGEWSTQQTSDRYELFAAVMHSGITISSGHYTAYVKITDLSHLEG
LSEISALDHKDDDIKTEPVNEQGAKALIVEDYDDGEVSFKVNGSGAMVVGSKVSNKKNAE
GVGLLGGQKSITNVELSNSKTSPCEKSGHIALENGQSDFAPENSSEDVKECSNQNGDVCN
GGISKSQALSASWSLREYEGKWILFDDSEVKTIEEKDLLISLSPNTSSTTTPYLLFYKKS
AVY
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgatactttgcagtaagcatgctgactttgacctgtttgcttttactgtatatcttttt
tgcagtcacatattctttttgtttgttcatttcttttgcagttgtgaccaggctgtacct
acagtgcagtctatttcacctgatgtatgtgaaaaaagggagaaccttctaccatttgtt
ggtttaagcaatcttggcaacacctgttaccttaacagtgtccttcaggtgttgtactat
tatcctgggtttaaagctggaatgaaacatttatttaatattatctcaaagaagaaagaa
aaattcaagagtgaagaagaccaaaaggatgaaagggaaactagtccagaggatatgcca
gccagttatgagctagtctgcaacttgaacagtttgattgtatccattgaaaaacttcag
attagttatctcaaaaatccagagaagtatactggtgaacttgccacacaaccaagaagg
ctacttaacaccctacgggagctcaatccaatgtatgagggatatctacagcatgatgct
caagaagtattgcagtgtattctgggttacatccaggaagtatgtcagaagttaaaggaa
gaagagaagaatgcagtagtggaaggggaaagtgcccagagcaataatatagcaggcaat
gaaattaatggaagggcagaacagcccagtacagttgacagtgaaccagagaataaaagt
gaaatagaagaacagaatgaaccttcagcgtccttacctgaggaaaaaatgagaaaaagg
ggaactggtaaaagaagtagtgatactgaagctggtaatgcaaagaagaaatctaaagta
attaaggatcagaaggtagctctggaggcaaaaacatgtgctcgatcaaaaagaaaacct
tcgggggatggctctgacagtcctgcagattcagatattaaaatctgtgtagaaaatagt
atagcaagacccttacagaaaaagtcacgactcgggcttggcttctttaagtcttcaggg
aagcaacctagcattctctccaaattttgtagtctgggaaagctaacaacaagcttggga
cataaggggcagacaaaagtaactgaagaagaggaacctcatccaaactctctaaaatgt
ggaagcaattcttgctctgtacccgaatgcagtggtagatgtacagctgaaatcagctct
gaaaggattgaagaaaaggcaataaaaagtcacgagctaaatgagcttgaactgatggag
cgattgtttcaaggtcagttggtcttaagaacacgatgtttggagtgtgaatgttttaca
gaacggagggaagactttcaggatattagtgtacctgtgcaagagaatgagccttctgaa
gtggaggatggttccaaaatttctccagagccaaaaatagaaaggaagacactcaggtgg
gcaatttctcaatttgcttcagttgaaaggattgtgggcgaagataaatatttctgtgaa
agttgccatcattatacagaagctgaacgtagtctcttatttgacaagatgcctgacgtt
ataaccattcacttgaagtgctttgctgctaacagctcagagtttgattgctacggtgga
ctgtcaaaagtcaacactcctttattgacccctctgaagctctctctaggagagtggagc
actcaacagacgagtgaccgttatgaattatttgctgctgttatgcatagtggtattact
ataagcagtgggcactacacagcatatgtcaaaattacagaccttagtcatttagaagga
ctttcagagatttctgccttggaccacaaagatgatgacattaaaacagaaccagtaaat
gaacagggagcaaaagctctgatcgtagaggattatgatgatggtgaagtctcttttaaa
gtcaatggaagtggagcaatggtagtgggaagcaaagtttcaaacaagaaaaatgctgag
ggtgttggactccttggagggcaaaaaagtataactaatgttgaattgtctaatagtaaa
accagtccctgtgaaaagtctggacatattgcattagaaaatggacaaagtgattttgca
cctgagaattctagtgaggatgtaaaagaatgttctaatcaaaatggagatgtttgtaat
ggtggaatatcaaaaagtcaggctttgagtgcgtcttggagtttaagggagtatgaggga
aaatggatactttttgatgattcagaagtaaaaacaattgaagagaaggacttattgatt
tctctatcccccaacacgtcatctacaactactccttatttgctgttttacaagaaaagt
gcagtgtattaa

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