Latimeria chalumnae (coelacanth): 102364540
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Entry
102364540 CDS
T02913
Symbol
PPFIA1
Name
(RefSeq) PTPRF interacting protein alpha 1
KO
K26226
liprin-alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102364540 (PPFIA1)
Membrane trafficking [BR:
lcm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102364540 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
102364540
NCBI-ProteinID:
XP_014343975
LinkDB
All DBs
Position
Un
AA seq
1180 aa
AA seq
DB search
MMCEVMPTISEAEIPSGGGGGHGSGSPLQSEPDAHFEQLMVSMLEERDRLLDSLRETQET
LSLTQGKLQEVSHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERRSMLEEELTITLKELTILKEQNNQKKIIPTDGTLDGVNEHDDTPSTNGKRSS
DGSLSHDEDLAKLIELQDIVDKQTKDLSQMKERLATLSSRVTELEEDLDIARKDLIKSEE
MNTKWQRDARESEEKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEER
HGNIEERLRQMEAHLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKE
RMAALEDKNALIRELENTKKLIEEIQHEKEQLLVEVEAMKTENDQIRLRAATSTLHHGRS
HLGSTPEFRYPVTPPSAMENDTYNATSVLRRPQKGRLAALRDEPSKVQTLNEQEWERAQQ
ASVLANVAQAFESDVDVSDIEEDRETIFSSVDILSPGGQADAQTLAMMLQEQLDAINEEI
RMIQEEKENTEQRAEEIESRVGSGSLDNLGQFRSMSSLTPAFTGSSLASSSPPGSGHSTP
RRIPHSPAREVDRLGVMTLSPVSKEDGRDDKAAIKCETSPPSTPRSLRLDMLNRGALHTC
SHEDIRDIRSSLGSQDGQTSNPSSSSSSQDSLNKAPKKKSIKSSIGRLFGKKEKGRPGQP
GKESMGQAGTPEADNNQDTLGLSKLGGQAEKNRRLQKKHELLDEARRQGLPFAQWDGPTV
VVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMS
LTSPSAPPTSRTSTGNVWVTHEEMENLAAAPQTTLAYGDMNHEWIGNEWLPSLGLPQYRS
YFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERRREESQ
HDIKDVLVWSNDRVIHWVQAVGLKDYANNLVESGVHGALIALDETFDYNALALSLQIPTQ
NTQARALLEREFNNLLSLGTERRLEEDDDKSFRRAPSWRKKFRPKDIRGLTAGSAETLPA
NFRVTSTMSSPSMQPKKMQMDGNVSGTQRLDSATVRTYSC
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgccaacaatcagcgaagcagagatcccgtctgggggaggtgga
ggccatggctcaggttcccctcttcagtcagagccagatgctcattttgagcagttaatg
gtgtccatgctagaagagcgagatcgtctgctggacagcctgagagagacccaggaaacg
ctgtctctgacccaagggaaactgcaggaggttagccatgagagagattcattacagaga
caattaaacactgcacttccacaggagtttgcagcacttactaaagagctcaatgtttgc
agagagcagcttcttgaacgagaggaggaaatagctgaattaaaagcggaaagaaataac
acacggctcctgttggaacacttggaatgcctagtgtctaggcacgagcgatcccttaga
atgacagttgtaaaaagacaagcacagtcgccagcaggagtatctagtgaagtagaagta
ctcaaagcactaaaatctttatttgaacaccacaaagctttagatgaaaaggtaagggag
agactccgagtagcattagagagacgtagcatgctggaagaagaactaacaatcacgctc
aaagagctgactattttaaaagagcaaaataaccagaagaaaatcataccaactgatggg
acattggatggagttaatgaacatgacgacacaccaagcacaaatggcaagaggtcctcc
gatggctctttaagtcatgatgaagaccttgcgaaactgatagagctccaagatattgtg
gataaacaaaccaaggacctgagccagatgaaggagcgtctggcaactctttctagcaga
gtgacagagctggaagaagatcttgatatagctcgcaaagatttaattaaatctgaggaa
atgaataccaagtggcagagggatgcacgggagagtgaagaaaagaaccgtcagttgcaa
gaacgcttggaactggctgaacaaaagctgcaacagactctcaggaaagcagagactcta
cctgaagtagaagctgaactagcacagagagtggctgcacttagtaaggctgaagagaga
cacggaaatattgaagaaaggttaagacaaatggaagcgcacctagaggaaaaaaatcaa
gaactgcaaagggctcgacagagggagaagatgaatgaggaacacaataaacgactatca
gatactgttgacaaactgctgtctgagtccaatgaaagacttcagctccatcttaaggaa
agaatggcagccctggaggacaagaatgccctaattcgtgaacttgaaaacacaaagaag
cttattgaagaaatacagcatgaaaaggagcagctgctagtagaagttgaggcaatgaag
acagaaaatgaccaaatcagattaagggcagctactagtactcttcatcatggccggtcc
catcttggcagtactcctgagttcaggtatcctgtaactcctccatctgcaatggaaaat
gacacctacaatgctacttcagtgctgcgtcgccctcagaaaggccgactggcagcacta
agagacgaaccatcaaaggtacagacgctgaatgagcaggaatgggagcgtgcacaacaa
gctagtgtattggcaaacgtagctcaagcctttgagagtgacgttgatgtgtcggatata
gaggaagacagggaaaccattttcagctctgttgatattctctcacctggtggacaggct
gatgcccagacgctggccatgatgcttcaagaacagcttgatgcaattaatgaagaaatt
agaatgattcaggaagaaaaagaaaacacagaacagcgagcagaggaaatagagagtcga
gttggtagtggaagtttggacaatcttggtcagtttagatcaatgagttcccttacccca
gctttcactggttcttcccttgccagttcctctcctcctggtagtggtcactctacaccg
aggcgaatcccacacagcccagctcgtgaagtggacagactgggtgtcatgacattgtct
ccagtatctaaagaagatggcagagatgataaagctgcaataaagtgtgaaacttctcct
ccctctacgcccaggtcgttgcgcctggacatgcttaacaggggagctctgcacacatgc
agccacgaagatatcagggatattagaagttctttgggatcacaggatgggcagaccagc
aatcccagcagtagcagcagtagccaggactctctgaacaaagcccccaaaaagaagagc
atcaaatcctctattggccgtctgtttggtaagaaagaaaaaggtcgacctggacagccc
ggcaaagaatcaatggggcaagctggtacacctgaagcagataacaaccaggatacctta
ggactcagtaaattgggagggcaggcagagaaaaataggaggttacagaaaaagcatgag
ctgctagatgaagcaagaagacaagggctaccttttgcacaatgggatggacctacagta
gttgtatggttggagctgtgggtagggatgcctgcctggtatgtggcagcttgccgagcc
aatgtgaaaagcggtgctattatgtcagcattgtccgacacagaaatccagcgggagatt
ggaatcagcaatcctctccacaggttaaagctcagacttgccattcaagaaataatgtcc
ttaaccagtccatctgctcctcctacatccagaacgtccacgggaaatgtctgggtaaca
catgaagaaatggaaaaccttgcagctgcaccacaaacgactttagcatatggtgatatg
aaccatgaatggattggtaatgagtggcttcccagtttgggacttcctcagtacaggagt
tatttcatggagtgtctggttgatgcccgtatgctggaccatttgactaaaaaggacctt
cgagggcaactgaaaatggttgatagttttcacagaaacagtttccagtgtggtattatg
tgtttacgaagacttaattatgataggaaagaacttgaaaggagaagagaagaaagccaa
catgacattaaagatgttctggtctggagtaatgacagagtgatacactgggtgcaagct
gttggtcttaaagattatgcaaataaccttgtagaaagtggtgtccatggtgctcttatt
gccttagatgaaacctttgattacaatgcattggctctttcactgcaaatcccaacacag
aacacgcaggctcgagctttacttgagagagaatttaacaacctccttagtttgggtaca
gagaggagacttgaagaggacgatgataaaagctttagaagagctccttcttggaggaaa
aagttcagaccaaaggatatacgtggactgactgctgggtcagcagagacgcttcctgct
aatttcagggttacatctacaatgtcttcaccttctatgcagccaaagaagatgcaaatg
gatggcaatgtatcaggaacacaaagactggactcagccacagttaggacctactcctgt
taa
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