KEGG   Latimeria chalumnae (coelacanth): 102364593
Entry
102364593         CDS       T02913                                 
Symbol
PNKP
Name
(RefSeq) polynucleotide kinase 3'-phosphatase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102364593 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcm01009]
    102364593 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102364593 (PNKP)
Enzymes [BR:lcm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     102364593 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     102364593 (PNKP)
Protein phosphatases and associated proteins [BR:lcm01009]
 HAD phosphatases
  Other HAD phosphatases
   102364593 (PNKP)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102364593 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6 DUF664
Other DBs
NCBI-GeneID: 102364593
NCBI-ProteinID: XP_005990983
Ensembl: ENSLACG00000014058
UniProt: H3B245
LinkDB
Position
Un
AA seq 611 aa
MECFLISVDKQHDPIPLLDDTPVILGRGPETRITDKKCSRHQVQLVADYKNRIVTVTQFG
TNPSSVEEITLNRGGSTLLKEGQTLFIVNGLHPQTLLFKETKPKPLANNTISKLTPLSPA
KQQRSSISPPKKTISDFFSSTKAQAQKRHPGNEEDPAEPNGKRLKFEREGPLAGNHDSEE
EEEDDDDKEMAEKLLQLQAMAAKYEQAAEKMAQAAARSSADASVPTKGQPWPKDSWEQHG
KLLVFTKKGMTASSKVAGFDVDGTVITTRSGKVFPTGPDDWRILFPEVPKKLKQLQKDGY
KIVFFTNQMGISRGKLRPEVFKAKMEAILEMLGIPVQVLVATGMGIYRKPVLGMWDYLRE
KANDGVTVDLEESCYVGDAAGRPANWAPERKKKDFSCSDRLFALNAGLRFFTPEEFFLGW
KKAPFKLPDFDPRSLDPQARLCDPPSATLVSASSEVIVAVGYPASGKSTFFREFLLPEGY
EHVNRDTLGTWQKCVSACEAALQRGQRVVIDNTNPEVESRSRYIDCAQKAGVPCRCFRFM
ASIDQAKHNNRFREMSGKDHVSVNDMVLNSYKSKFVAPSLSEGFSEIVQIHFVPRFKDPK
LESLFRQFSEG
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggagtgtttcctgattagcgtggataagcagcatgatcccattccacttctggatgac
accccagttatcctcgggaggggaccagaaacccggataacagataagaagtgttcaagg
caccaagttcagctggttgcagattacaagaatcgaattgttacagttacgcagtttggt
acaaacccgtcttctgtagaagaaattacattaaaccgtggaggcagcaccttgctgaag
gaaggacagaccctcttcattgtaaacggccttcacccacagactctcctcttcaaggag
acaaaacccaaacctttggccaataacaccatatccaaactaacacccctctcccctgcc
aagcaacagcggagcagcatctctcctccaaagaaaacaatttcggatttcttttcctcc
acaaaggcgcaggcacagaagagacacccaggtaatgaggaggacccagcagagccgaat
ggcaagaggttaaagtttgagagggaaggtcctttagctgggaaccatgattctgaggag
gaggaggaggatgatgatgataaggaaatggcagaaaagctccttcagctgcaggcaatg
gcagcgaaatatgagcaggcggcagagaagatggctcaggctgctgcaaggtcctctgct
gatgcatctgtgccaaccaaagggcagccctggcccaaagactcctgggaacaacatggc
aaactcctggtttttactaaaaaaggcatgacagcttcctcaaaggtggccgggttcgac
gtggacggcactgtcattaccactcgttctgggaaagtctttccaactggacctgatgac
tggagaattcttttccctgaagtcccaaagaaactgaaacagcttcagaaagacggatac
aagattgtctttttcaccaatcagatgggaattagccgtgggaaactacgtcctgaagtc
ttcaaggcaaaaatggaggccatcctggagatgctggggatcccagtacaggttcttgtt
gccacagggatgggaatatatcggaaaccagtccttggaatgtgggattacctgcgtgaa
aaggccaatgatggagtcactgtggacttggaggagagctgttatgtaggagatgcggca
ggacgtcctgcgaactgggctccggagcggaagaaaaaggacttttcctgcagtgaccgt
ttgtttgctctgaatgccggcctgaggttcttcacccctgaagagtttttcttgggatgg
aagaaagcgcctttcaaactccctgacttcgacccgagaagtctagacccacaagctcgt
ctctgtgatcctcccagtgccaccctggtctcggcctcatcggaggtgatagtggctgta
ggttaccccgcctctggtaaatccacatttttccgagaattcctccttccggaaggttac
gaacacgtgaaccgggacactctgggtacctggcagaagtgtgtctcggcatgcgaagca
gcgctacagcgaggacagcgagtcgtcatcgacaacacaaaccccgaagtagagtccagg
agcaggtacattgattgcgcccagaaagctggagttccctgccgctgttttcggtttatg
gcttccattgaccaggcaaagcataacaacaggtttcgtgagatgtcaggaaaagaccac
gtctctgtcaatgatatggttttaaacagttacaagagtaagtttgttgcgccatccctc
agcgaaggtttcagcgagattgtacagatccattttgtgccccgcttcaaggaccccaag
ctggagagtctgttccgccagttctccgagggctga

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