Latimeria chalumnae (coelacanth): 102364625
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Entry
102364625 CDS
T02913
Symbol
DDX4
Name
(RefSeq) DEAD-box helicase 4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102364625 (DDX4)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102364625 (DDX4)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102364625 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102364625
NCBI-ProteinID:
XP_014345381
LinkDB
All DBs
Position
Un
AA seq
742 aa
AA seq
DB search
MADEDWEAETSQQPSCVPSFGPVMENFANTEREEKGDFSQNVNSRGGRGCTDLGDLNPKF
NHAPSRNKFPKQGSGDDKSFFGNRNFEKRDNGFNGNKFSGGGGHGFGRSRGGFGRPNSQR
DCEESSQYSRNRGGFGDFSRREENQEDHEQPRSRSVFGNFGNRGFGNESNSDGNNRLGRG
GRGGGRGGRGPFSQGGDENSRGRGGFGRGGARGGNENSRGFGRGARGGGGYKGRNEDLFS
GSDSEKAPWKSGDEGGENQGPKVTYVPPPPPEEEEAMFAHYQTGINFDKYDEILVDVSGH
NVPSAILTFEEAGLCETLNRNINKSGYVKPTPVQKHGIPIVLAGRDLMACAQTGSGKTAA
FLLPILAQLMHAGVTASQFKELQEPEVIIVAPTRELINQIFLEARKFSYGTCVRPVVVYG
GTNTGHSIRQISQGCNILCGTPGRLLDIINRGRIGLSQVKYLVLDEADRMLDMGFGPDMK
KLVSSPGMPLKENRQTLMFSATFPDEIQRLAADFLKQDYLFLVVGQVGGACSDVQQNILQ
VTQYSKRDKLVEILQSIGNERTMVFVETKKKADFIATFLCQEKICTTSIHGDREQREREE
ALRDFKFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNIGKAI
SFFDPEPDSPLARSLVKVLADAHQDVPTWLEEIAFGHEGYCSNPRRSVFASVDARKSFGG
NRGFAESIAPVMNNAADEESWD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaagactgggaagccgagacgagtcagcagccttcgtgtgttccgagcttc
ggccccgtcatggagaactttgctaatacagagagggaagagaaaggagacttcagtcaa
aatgtgaattcgaggggaggcaggggatgcactgatttaggggatttgaatccaaagttt
aaccacgctccaagccggaataagtttccaaaacaaggttctggagatgataaaagtttt
tttggcaaccgaaactttgagaaaagggataatggatttaatggtaacaagttttcagga
ggaggaggacatggatttggaagaagccgtggtggatttggacggcctaactctcaaagg
gattgtgaagaatccagccaatactcaagaaacagaggaggatttggagattttagcagg
agagaagaaaatcaagaagaccatgagcagcctagaagcagaagtgtgtttggaaatttt
ggaaatcgtggatttggaaatgaaagcaattctgatggcaacaatagattgggaagagga
ggtcgtggaggtggcagagggggccgtggaccatttagtcaaggtggtgatgaaaatagc
cgtggcagagggggatttggccgcggtggagcacgcggtggaaatgaaaatagccgtgga
tttggtcgtggtgcaagaggtggtggtggttataaaggaaggaacgaagatctcttttcg
ggttctgattctgaaaaagctccttggaagtctggagatgagggtggtgaaaatcaaggt
ccaaaggtgacgtatgtaccaccacctccaccagaagaagaggaggcaatgtttgcgcat
tatcaaacgggaatcaactttgataagtatgacgaaattcttgtggatgtttcggggcac
aatgtcccatcagcaatcctgacctttgaagaagctgggctttgtgaaaccctgaacagg
aatatcaataaatctggctatgtgaaacctaccccagtacagaaacacggtatccccatt
gtccttgcagggcgtgacttaatggcttgtgcacaaactggttctggcaaaacggcagct
tttcttttaccaattttagctcaactgatgcatgctggagtaactgcttctcagttcaaa
gagttacaagaaccagaagtgattattgtagcccccactagagagctaatcaaccagatt
ttcctggaggctagaaaattttcatatgggacatgtgtaaggcctgttgtggtctacgga
ggaacaaatacgggtcactcgatacgtcagatatcgcaaggctgtaatatcttatgtgga
actccaggaagacttctggatatcattaatagaggcaggatcggacttagtcaggtgaag
tacctggttctggatgaggctgaccgtatgttagatatgggctttggaccagatatgaag
aaactggtgtcttctccaggcatgcctctaaaagagaaccgccaaactctgatgtttagt
gccaccttccctgatgagattcaaaggctagctgcagactttctgaagcaagactactta
ttccttgttgttggacaagttggtggagcctgcagtgatgttcagcaaaacatattgcaa
gttacccagtattcaaagcgagacaaattggttgaaatcctccagtctataggtaatgaa
cgcacaatggtgtttgtggagactaagaagaaagcagacttcattgctacatttctttgt
caggaaaagatctgcactacaagtattcatggtgatcgggagcagagagagcgagaagaa
gcacttcgagattttaagtttgggaaatgccctgttttagttgctacatctgtagctgcc
agaggactggacattgaaaatgtgcaacacgtcataaactttgatcttccttctactata
gacgaatatgttcaccgtatcggtcgcacaggccgttgtgggaacattggaaaagctata
tccttctttgatccagagccagacagtccattagcccgttccttggtgaaagttttagct
gatgctcaccaggatgtacccacttggctggaggagattgcgtttggtcacgagggctac
tgcagcaatccaaggagaagcgtgtttgcatctgttgatgcacgaaagagctttggagga
aatcgaggttttgcagaaagcattgcaccagtaatgaataatgctgcagatgaggagtcc
tgggattaa
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