Latimeria chalumnae (coelacanth): 102364715
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Entry
102364715 CDS
T02913
Name
(RefSeq) protocadherin beta-1-like
KO
K16494
protocadherin beta
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102364715
Cell adhesion molecules [BR:
lcm04515
]
Cadherins
Protocadherins
102364715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF5527
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
102364715
NCBI-ProteinID:
XP_014343515
LinkDB
All DBs
Position
Un
AA seq
831 aa
AA seq
DB search
MEVFYPLWSWMAKWQVQCFLIFIFFGPIASGQIRYSISEEMEKGSFVGDITKDLGLDVKE
ISTRKGRIVSENNKSHFQVNYNNGVLFIKDRIDREELCGQFQPCILEFQFVIEKPLELHH
TEVEIKDINDNAPTFAKNEMLLQVQEVTPLGSVFFLQSAQDPDVGTNALQNYQISYNEHF
YLEVRIRGDGSKFAELVLKKPLDRERVSEYNLILTATDGGSPQKSGSAHVHIVVLDVNDN
FPVFSQELYKVSVLETVQKEQLILVVNATDLDEGSNGEITYFFPQISGTDQQMFKINPMT
GEIRLIGVLDFEGVQVYELDVQATDGGGLSTHCKVLVEVLDVNDNAPVLVITSVSTPLPE
DSPLQTVVALFSVKDLDSNENGKVSCFIREDLPFVLKLSIKNFYQLTISKGLDREKVSEY
NITITAIDSGSPPISSLATIQIKLSDVNDNAPTFNQTSYAIFLKENNKPGHCIGSIQAFD
IDYKDNAHIIYSVVEKLKNESTLPSFISINSENGNVYARHSFNFEVLREFHVSIVARDCG
SPPLSSTVTVKVIILDENDNSPYILYPSQKVTTTADLVPRSADIGYLVTKVIAVDADSAQ
NAWLSYHIMKATDPTLFTLGSNTGEIRTARLIMNQDRNKQIMVILVEDNGQPALSTTVTL
RILLVESLSNVHLEFMDLGAEKEYDGNLTMYLIMSLSLVSFIFLASIAILIFMKICRYRK
LRQQFHTPSENHYTSNQGNFPPNYLDAKFNGSLIGTLPHNYCYEVRLAAESVKKEFNILG
AYSTNTANRKKDTAQDQEFTSATAANTNLSDKRDLFNEVRNSLANYGLFDN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttctacccactctggagctggatggctaagtggcaagtacaatgtttcctt
atttttattttctttgggccaatagcttcggggcagattcgttattcaatttcagaagaa
atggaaaagggctcatttgttggtgacattacgaaagatttgggattagatgttaaagaa
atatctacacgtaaaggtcgaattgtttccgaaaataacaaatcgcattttcaagtcaac
tataacaacggagtattgtttattaaggataggatagatcgtgaagaactatgtggacag
tttcaaccctgtatattagaattccagtttgtgattgaaaaacctttagaattacaccac
acggaagtggaaattaaagatatcaatgataacgctccaacttttgctaaaaacgaaatg
ctcctacaagtgcaggaagtaacaccacttggatccgttttcttcctgcagagcgcacag
gatccagatgtcggaactaacgctcttcaaaattatcaaattagctacaatgaacatttt
tatctagaagtacgaattcgtggtgatggcagcaaattcgcagagctagtattaaaaaag
ccacttgatcgagagagagtgagtgaatataatttaatcctgaccgcaactgacggaggt
tctccgcagaaatccggctctgcccacgtgcacattgttgttctggatgtaaatgataac
tttcctgtgttcagtcaagagttgtacaaagtgagtgttctggagactgttcaaaaagaa
cagttgattctggttgttaacgccactgatttagatgaaggatcaaacggtgaaataact
tattttttcccacaaatatctggcacagatcaacaaatgtttaaaattaatcctatgacc
ggagaaataagattaattggagtactggattttgaaggcgttcaagtatatgaattagat
gtgcaagctactgacggaggaggactatcgactcattgcaaagttcttgtagaagttctt
gatgtaaacgacaatgctcctgtattggtgataacgtctgtttctactccgttaccagaa
gactcaccacttcaaactgtagtagctttgtttagtgtgaaggacctagacagtaatgaa
aacgggaaagtgtcatgttttattcgagaagatctaccatttgtattgaagttatctatt
aagaacttttatcagttgacaataagcaagggacttgatcgcgaaaaggtttcggagtac
aacatcactataacagctattgactctgggtctcctcctatttcaagtctagcgaccata
cagataaaactgtcagacgtaaatgataatgccccaacatttaaccaaacatcctatgca
atcttcttgaaagaaaacaacaagcccggacactgtattggttccatacaagcctttgat
atagattataaagacaatgcacatataatctattctgttgttgaaaaacttaaaaacgaa
tcaactttgccttcctttatctctattaattctgaaaatggtaacgtgtatgcccgtcac
tcctttaattttgaggtgctgagagagttccacgtgtcaatagtagcccgagattgtggt
tccccacctctaagcagtactgttacagtaaaagtgattatactggacgagaacgataac
tctccctacattctgtacccgtcacagaaggtcactacaactgcagacctggtcccgcga
tcagcagatataggataccttgttacaaaagtaatagcagttgatgctgactcagcccag
aatgcctggctgtcctatcacattatgaaagccaccgatcctacactttttactctggga
tctaatacaggagaaatcagaacagcaagactaattatgaaccaagatcgtaacaagcaa
ataatggtgatcctggttgaagacaatggacaaccggctctttcaacgactgttacccta
agaattttgttggtagaaagtctttctaatgttcacttagaatttatggacctgggcgct
gaaaaggaatacgacggtaatttaacaatgtatttgataatgtcactatctttggtatct
ttcatatttctggcttcaatagcaatactgatatttatgaagatctgcaggtatagaaaa
ctaagacagcagtttcatacccccagtgagaatcactatacttcaaatcaagggaatttc
ccacctaactatcttgatgcgaaatttaacggatccctaatagggaccttacctcataat
tattgttatgaggttcgcttagctgcagaatcggtaaagaaagaatttaacattcttggt
gcttacagcaccaacactgctaatagaaagaaggacactgcacaggatcaggagtttaca
tcagctacagcagcaaataccaatttaagcgataaaagagatttatttaatgaggtgaga
aattctttagctaattatggtttgtttgataattaa
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