Latimeria chalumnae (coelacanth): 102364867
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Entry
102364867 CDS
T02913
Symbol
PDLIM2
Name
(RefSeq) PDZ and LIM domain 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102364867 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
102364867 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102364867 (PDLIM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
MetallophosC
DUF7455
Motif
Other DBs
NCBI-GeneID:
102364867
NCBI-ProteinID:
XP_005992651
LinkDB
All DBs
Position
Un
AA seq
401 aa
AA seq
DB search
MSLMVNLIGPSPWGFRITGGRDFNKPIAVSKVNEHSKAEEADLRPGDVIKAINGLPTTDM
LHVEAQNKIKSSTTKLLLTVERPEPTSLRHTNGIISTEILATRFQDALPTGKENYVEYSP
SSTGSLSPRPTSPYSPQSPGYQMRSSYSTLKPFPAFSPGEAKSESPASSKSFQTQTWSPK
ANDDDDVSYSYRGHSLSKETGRDSRRSTSPLGNTSFYSQPPSASFSSASSPGSPKEFNTS
TNMRASPNSNSMNRSSDFDPAMKRFDQESEVYKMIQENRESKRAPRQSSTFHMLQEVLEA
DEKEAAARFPGKFSPNAPKSVAGVQKFHTCEKCGASIVNQAVRIMENHYRHPECYTCTDC
GLNLKMRGHFWVGDLMYCEKHAKERYQAPEGAKVTAVYSKS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaatggtgaatctgattggcccatctccatggggctttaggataactggagga
agagactttaacaaacctatcgctgtgtccaaggttaatgaacacagtaaagctgaagaa
gctgacctacgacctggtgatgtcatcaaggccataaatggactgcctacaacagacatg
ttgcatgtggaggctcaaaacaagattaaatccagtaccacaaaactgcttcttactgtt
gagcggccagagcctacatccctcaggcacaccaatgggatcatctcaactgaaatccta
gcaacaaggttccaggatgctttgcccacaggaaaagagaactatgtggaatattctccc
tctagcacaggctccctcagccccaggcctacaagcccttactcgcctcagtctcctggc
taccagatgcgaagctcctatagcacccttaaaccattccctgccttttctcctggagag
gcaaaatctgaatccccagcctccagcaagagtttccagactcagacatggtcccctaaa
gcaaatgatgatgatgatgtttcctattcctaccgggggcacagtctaagcaaggagact
ggaagagatagcagaagaagcacctctccacttggcaacacaagcttttattcccaaccc
ccctctgcatcattctctagtgcttcatcccctgggagtccaaaggagttcaacacctca
acaaacatgagggcttctcctaattcaaacagcatgaacaggagttctgattttgaccca
gccatgaagcgttttgaccaggagtcagaagtgtataaaatgatccaggagaacagagag
tcgaagcgtgctcctcgacagtccagcacattccatatgctgcaggaagtactggaagca
gatgagaaagaggcagcagccagattccctggaaaattttctccaaatgctccaaagtca
gtagcaggtgtccagaagttccacacttgtgaaaagtgtggcgcaagcattgtgaaccaa
gcagtgagaatcatggagaatcactatcgtcacccagaatgttacacctgtaccgactgt
ggcctcaacctgaagatgcgtggccacttctgggtgggtgatctaatgtactgcgagaag
catgcaaaggagcgctatcaagcccccgaaggtgccaaagtcacagccgtctattcaaaa
tcttaa
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