Latimeria chalumnae (coelacanth): 102364876
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Entry
102364876 CDS
T02913
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102364876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102364876
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102364876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
102364876
NCBI-ProteinID:
XP_014343276
Ensembl:
ENSLACG00000011944
LinkDB
All DBs
Position
Un
AA seq
448 aa
AA seq
DB search
MNLNLKTGRSYGTGAGAKLQPKGIDLDAPGSVNGLPVVEVDLDSFEDKPWRKPGADLSDY
FNYGFNEETWKAYCEKQRRLQLGLEPSSGVNTENKITVQQGRTGNAEKEVESNIIKTDFK
ADFTSPLGGRMKAGPPPNRKLGGTIDVIGGTAGTIRRVEGRRRDKHASEENPIQVLGDHS
NKPQPPPPPQQPPPPQQQQFAPPAGPPPPPIGAPPPHFLHPPPPVTSVPPPLHPPGLPPP
GPIPGLFPPPIAPPPALLLPPLDGSQSSTFANRQPPPFGYSSGSGDSGFISYPPISTSHT
PWVTNLDKGTSSSHWDYQASRRDRDRDRDRERERERESHRERDRTPTTSEYTTEEERYRY
YSRERSYDFEREYRSRDRSREREDRHRERRHREKEESSKHKSSRRKQHESEEGESHRRHK
HKKNKRSKEDKEASEDGAPEGEEQDIKE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaacttgaagactggccgtagctatggtacaggagcaggagccaaactgcag
cctaaaggaattgacctggatgctcctggaagtgtaaacgggctaccagtagtagaagta
gatttggattcctttgaagataaaccatggagaaaaccaggagctgatctttcagactat
tttaattatggattcaatgaggagacatggaaagcatattgtgagaaacagagaagacta
cagctagggttggagccttcatccggagtgaacacggagaacaagataactgtccaacag
gggaggactggaaatgcagaaaaagaagtagaaagcaacataataaaaacagacttcaaa
gctgacttcacttctcctcttgggggaaggatgaaggcagggccaccacctaataggaag
ctgggcgggacaattgacgtgatcggtggaacagcaggtaccattaggcgggtggaagga
aggcgccgggataagcatgcgtcagaggaaaaccccatccaggttcttggagaccatagt
aacaaacctcagcctccaccaccacctcagcagccaccgccaccacagcagcagcagttt
gcccctcctgcagggccccctcccccacctataggtgcccctccgcctcatttcttgcac
ccaccccctccagttaccagtgtcccaccacccttgcacccaccaggcctaccaccacca
ggccctattccaggtttgtttccaccaccaattgctcctcctcctgcactcctccttcca
cctcttgatggaagccagtcttctacttttgctaacaggcaaccacctccattcggatac
agtagtggcagtggtgattctggctttattagctaccctcctatctccacttctcacact
ccctgggtgacaaacttggacaagggaaccagcagcagtcactgggactaccaagcttcc
agacgggacagggatcgtgaccgggacagggagagggaacgtgagagagagagccatcgg
gaacgggatagaactcccacaacaagtgaatacaccactgaggaagagagataccgctat
tacagccgagaacgtagttatgattttgaacgagagtatcgaagcagagatcgtagcagg
gagcgtgaagacagacacagagagcgccgacaccgggaaaaggaggaaagtagcaaacac
aaatcatccagacgtaagcaacatgaaagtgaagaaggagaaagccacaggcgtcacaaa
cacaagaaaaacaaacgcagcaaagaggacaaagaagccagtgaggatggtgccccagaa
ggagaggagcaagatatcaaagaatga
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