Latimeria chalumnae (coelacanth): 102364942
Help
Entry
102364942 CDS
T02913
Symbol
NHLRC1
Name
(RefSeq) NHL repeat containing E3 ubiquitin protein ligase 1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102364942 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102364942 (NHLRC1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102364942 (NHLRC1)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102364942 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_4
Baculo_IE-1
RING_XB3-XBAT31
zf-C3HC4_2
FlhC
Motif
Other DBs
NCBI-GeneID:
102364942
NCBI-ProteinID:
XP_006011441
Ensembl:
ENSLACG00000005206
UniProt:
H3A889
LinkDB
All DBs
Position
Un
AA seq
397 aa
AA seq
DB search
MSAGPLTTWTLQNFLKETELNLLECKVCFEKYSHQQQHRPKNLLCGHVMCQDCVSSLARP
QHFKLECPFCRKFCKSSETSDCLPVLHLSDIFNNMVSSVSGPETAGESAGSVAGLASAGL
KLKGTFGGWGRLINPTGVAFCARAELVAVVHDGKQRVSLFTPRGELVKQFGPNVDSGIRY
PLDVAVALNGCLIITDAGDRAVKVFSSDGRNIMIVRDTFCLPWGVSINSQNQAVVTDSEA
GKLVLLEVDFHKGKLKQLRTLCPNLCHPRGVAVSQSSGHVAVVEHLRNKEKKCSGTRLKV
FNSQMQLISQVDTFGFSLMFHVQLRASAVAFDKEDNVIVADAGNKMVVSLGTLARFPSFT
PIITYGLLYPVGLALMGLNSVIVLDSGNHSVNIFDFL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggacctttaacaacttggacgcttcagaattttttgaaagaaactgaactc
aatttgctggaatgcaaagtctgttttgaaaaatacagccatcaacagcagcataggcca
aagaatctattgtgtgggcatgtgatgtgtcaggattgtgtctcctctctggcccgtccg
cagcacttcaaactggagtgccctttctgccgcaaattttgtaagtcttcagagaccagt
gactgtttgcccgtcttacacctgtcagatatttttaacaatatggtcagctctgtgtca
ggaccggaaaccgcaggggaaagtgctggatcagtggctggtctggcatcagcaggcctg
aagctgaaaggcacttttggaggctgggggagactcatcaaccctactggggtggcattt
tgtgcaagagctgagctagtggcagttgtccatgatggtaagcaaagagtaagccttttt
acccccagaggagaactggtcaagcagtttggtccaaatgtagattctggtatcaggtac
ccgcttgatgtagcagtcgcattgaacggatgtttaattattacagacgcaggggatcga
gctgttaaagttttttcttctgacggaaggaatatcatgattgttagagatacattctgt
ttaccatggggcgtgagcatcaactctcagaaccaggctgttgtgactgattcagaagca
gggaaacttgttctgctagaggttgattttcacaaggggaagctgaagcaactccgaaca
ctttgccccaacttgtgtcatccaagaggagttgcggtttcacaatccagtggacacgta
gctgtcgtggagcatttgagaaataaggaaaagaaatgtagcggcacaagactgaaagtg
ttcaacagtcaaatgcagctcatcagtcaggtggacacctttggctttagcctaatgttc
catgtgcagttgcgtgccagtgccgtagcatttgacaaggaagacaatgtaattgttgca
gatgcggggaacaaaatggtggtgtctttggggacgcttgcaagatttccttcctttaca
cccatcatcacttatggactcttataccctgtagggcttgctcttatgggacttaattct
gtgattgtgttagacagtgggaatcactctgttaacatatttgactttttgtga
DBGET
integrated database retrieval system
