KEGG   Latimeria chalumnae (coelacanth): 102365106
Entry
102365106         CDS       T02913                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03030  DNA replication
lcm03410  Base excision repair
lcm03420  Nucleotide excision repair
lcm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102365106 (RFC4)
   03410 Base excision repair
    102365106 (RFC4)
   03420 Nucleotide excision repair
    102365106 (RFC4)
   03430 Mismatch repair
    102365106 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcm03032]
    102365106 (RFC4)
   03036 Chromosome and associated proteins [BR:lcm03036]
    102365106 (RFC4)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102365106 (RFC4)
DNA replication proteins [BR:lcm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102365106 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102365106 (RFC4)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102365106 (RFC4)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102365106 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102365106 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_16 AAA_30 AAA_22 AAA_11 Mg_chelatase AAA_14 Gp44_lid DUF815 DNAX_ATPase_lid AAA_24 SLFN-g3_helicase AAA_28 RuvB_N AAA_5 Cdc6_lid AAA_19 TIP49_C ResIII AAA_7 ATPase_2
Other DBs
NCBI-GeneID: 102365106
NCBI-ProteinID: XP_005989466
Ensembl: ENSLACG00000017842
UniProt: H3BEI1
LinkDB
Position
Un
AA seq 360 aa
MQAFLKGTSSISTKPIKEKNTAGTSGESKKQKPIPWVEKYRPKCIDEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVK
YFAQLAVAGTRTDGKPCPPFKIIILDEADSMTTAAQAALRRTMEKESKTTRFCLICNYIS
RIIEPLTSRCSKFRFKPLTDKIQEQRLLEICEKENVKCSNEAIASLVQVSEGDLRKAITL
LQSAARLTGGKEVSESIVMEIAGVVPERTIDGLIAACNSGSFEKLETVVQNMISEGHAAT
QLINQLHDVIIEKADLDDKQKSAITEKLAEVDKCLADGADEYLQIISLCAVILQQVTQNN
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcaggcatttctgaaaggaacctcatctatcagcaccaagcctataaaggagaaaaac
actgcaggaactagtggagaaagcaagaaacaaaaacccattccatgggttgaaaaatac
cgaccaaagtgtatagatgaggttgccttccaggaggaggtggttgccgtgctgaagaaa
tcactagagggagctgatttgccgaacctcttgttttatggtccacctggaaccggaaag
acctccacaatcctagctgcagccagagaactctatggccctgaattgtatcggcagcgt
gttcttgagttaaatgcctccgatgaacgtggcatccaggtggttcgtgaaaaggtgaaa
tattttgctcagcttgcagttgcaggaacccgcacagatggtaaaccttgtccgcccttt
aagattataatcctggatgaagcagactccatgacaactgcagctcaggctgcacttcga
cgcaccatggagaaggagtccaaaaccacgcgcttttgtctcatctgtaactacatcagc
agaataattgaacctctaacgtcccgatgctccaaattccgtttcaagccactgactgat
aaaatacaagaacagcggttgctagagatttgtgaaaaggaaaatgtaaaatgcagtaat
gaggcaatagcttcccttgttcaggtatcagaaggggacttacgaaaggcaatcacactt
ctccagagtgcagctagattaactggaggcaaagaggtctctgagagcatcgtcatggaa
attgctggggttgtacctgaaagaactattgatggtctcatagcagcatgtaacagcggg
tcttttgaaaaactagagactgttgtccaaaacatgataagtgaagggcatgctgctacg
caacttatcaaccagctccatgatgtaatcattgagaaagcggatcttgatgacaagcag
aagtcagcaatcacggaaaaacttgcagaagtagacaagtgtttggcagatggtgctgac
gagtatcttcaaatcatcagtctctgtgctgttattttgcaacaggttactcaaaacaat
tga

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