Latimeria chalumnae (coelacanth): 102365106
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Entry
102365106 CDS
T02913
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03030
DNA replication
lcm03410
Base excision repair
lcm03420
Nucleotide excision repair
lcm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102365106 (RFC4)
03410 Base excision repair
102365106 (RFC4)
03420 Nucleotide excision repair
102365106 (RFC4)
03430 Mismatch repair
102365106 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcm03032
]
102365106 (RFC4)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102365106 (RFC4)
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102365106 (RFC4)
DNA replication proteins [BR:
lcm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102365106 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
102365106 (RFC4)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102365106 (RFC4)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102365106 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
102365106 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_30
AAA_22
AAA_11
Mg_chelatase
AAA_14
Gp44_lid
DUF815
DNAX_ATPase_lid
AAA_24
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_5
Cdc6_lid
AAA_19
TIP49_C
ResIII
AAA_7
ATPase_2
Motif
Other DBs
NCBI-GeneID:
102365106
NCBI-ProteinID:
XP_005989466
Ensembl:
ENSLACG00000017842
UniProt:
H3BEI1
LinkDB
All DBs
Position
Un
AA seq
360 aa
AA seq
DB search
MQAFLKGTSSISTKPIKEKNTAGTSGESKKQKPIPWVEKYRPKCIDEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVK
YFAQLAVAGTRTDGKPCPPFKIIILDEADSMTTAAQAALRRTMEKESKTTRFCLICNYIS
RIIEPLTSRCSKFRFKPLTDKIQEQRLLEICEKENVKCSNEAIASLVQVSEGDLRKAITL
LQSAARLTGGKEVSESIVMEIAGVVPERTIDGLIAACNSGSFEKLETVVQNMISEGHAAT
QLINQLHDVIIEKADLDDKQKSAITEKLAEVDKCLADGADEYLQIISLCAVILQQVTQNN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctgaaaggaacctcatctatcagcaccaagcctataaaggagaaaaac
actgcaggaactagtggagaaagcaagaaacaaaaacccattccatgggttgaaaaatac
cgaccaaagtgtatagatgaggttgccttccaggaggaggtggttgccgtgctgaagaaa
tcactagagggagctgatttgccgaacctcttgttttatggtccacctggaaccggaaag
acctccacaatcctagctgcagccagagaactctatggccctgaattgtatcggcagcgt
gttcttgagttaaatgcctccgatgaacgtggcatccaggtggttcgtgaaaaggtgaaa
tattttgctcagcttgcagttgcaggaacccgcacagatggtaaaccttgtccgcccttt
aagattataatcctggatgaagcagactccatgacaactgcagctcaggctgcacttcga
cgcaccatggagaaggagtccaaaaccacgcgcttttgtctcatctgtaactacatcagc
agaataattgaacctctaacgtcccgatgctccaaattccgtttcaagccactgactgat
aaaatacaagaacagcggttgctagagatttgtgaaaaggaaaatgtaaaatgcagtaat
gaggcaatagcttcccttgttcaggtatcagaaggggacttacgaaaggcaatcacactt
ctccagagtgcagctagattaactggaggcaaagaggtctctgagagcatcgtcatggaa
attgctggggttgtacctgaaagaactattgatggtctcatagcagcatgtaacagcggg
tcttttgaaaaactagagactgttgtccaaaacatgataagtgaagggcatgctgctacg
caacttatcaaccagctccatgatgtaatcattgagaaagcggatcttgatgacaagcag
aagtcagcaatcacggaaaaacttgcagaagtagacaagtgtttggcagatggtgctgac
gagtatcttcaaatcatcagtctctgtgctgttattttgcaacaggttactcaaaacaat
tga
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integrated database retrieval system