Latimeria chalumnae (coelacanth): 102365195
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Entry
102365195 CDS
T02913
Symbol
IGHMBP2
Name
(RefSeq) immunoglobulin mu binding protein 2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcm03009
]
102365195 (IGHMBP2)
03012 Translation factors [BR:
lcm03012
]
102365195 (IGHMBP2)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102365195 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
102365195 (IGHMBP2)
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
Other ribosome biogenesis factors
102365195 (IGHMBP2)
Translation factors [BR:
lcm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102365195 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
SMUBP-2_HCS1_1B
AAA_12
R3H
AAA_30
AAA_19
zf-AN1
DEAD
ResIII
AAA_22
AAA_16
UvrD-helicase
NAT10_TcmA_helicase
Flavi_DEAD
nSTAND3
nSTAND_NTPase5
AAA_25
IstB_IS21
PhoH
Zot
CbiA
ABC_tran
NPHP3_N
UvrD_C_2
AAA_33
AAA_31
SFTA2
AAA
NTPase_1
ATPase
Motif
Other DBs
NCBI-GeneID:
102365195
NCBI-ProteinID:
XP_014349592
Ensembl:
ENSLACG00000018792
LinkDB
All DBs
Position
Un
AA seq
969 aa
AA seq
DB search
MIVENFVSQNLELLKEEREAEIEETRAWQENISLKELQRRGVCLLKLHVASQRTGLFGRL
LVIFQPRKYEPDATLPSNSFGPGDIVGLCDSQGSGQSSDQLATGIVTRVTQKAITVAFDE
SHDGLNLDRESPYCLLKLANDVTYKRLKNALNSLSQYSSGPASNLIGVLFNYFEPSCSLE
QRQLELYNTSLDNSQKEAVYFSLSQKELAIIHGPPGTGKTTTVVEVVLQAVKQGLKVLCC
APSNVAVDNLIERLAEYKTKVLRLGHPARLLESIQRHCLDAVLAHSDNTQIVADIRRDID
QSFAKLKKTQNKGEKSHFRIEIKALRKELKEREEAAMIQILKHAHVILATNTGASNDGPL
KLLPEDYFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKLVGAHLGFT
ISWQKYSCNTEGKDMPSIASTDETELPLLLVDTSGCGLFELDVEDEQSKGNQGEVQIVAR
HIDALAEAGVNAKDIAVIAPYNLQVEMLRQQLCHRHPELEIKSVDGFQGREKEAVVLSLV
RSNTKGEVGFLAEDRRINVAVTRARRHLAVVCDTQTVSCHKFLKSLVDYMTEHGEVRTAF
EYLDDIVPQNCSHQASDSHCEPQGQNKAKEASTKQKANHEQQRRQKTNKIKKTIANSRPS
PDPLGIKNVPEGNVSSTQDFLDQAKVKVVSEENENKLRAMIMEFLADSKSIKLEFPPSLN
SHDRLLVHQMAEELGIQHVSVGEAEDRYIVVSKPGLLDTQEETDTDIKGEQLHHKSACSE
EDTRSKMKDNGRSREDSSSTTVDLKALHMQRMQREQMKREEKAKIKKELSATMQQKVKAS
EKEKGPFKSGAVAATEDDFDALIASVVKADSTCGFSRCKASVVTLGQFCVHCNKRYCLSH
HIPEIHGCGEKAKAQARMRISREGVLYAGSGSKDHLPDPTKKAHLQRKLDKKLTDFAAQR
KSKKKEKDK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggagaattttgtaagccagaatttagaactgctaaaagaggaaagagaagca
gaaatagaagaaaccagagcatggcaggaaaatatctctttaaaagaacttcaacgcaga
ggagtttgtttgttaaaacttcatgtagccagccaaagaactggattgtttggaaggctg
cttgtaatatttcaaccaaggaaatatgaaccagatgcaacgcttcctagtaacagcttt
ggacctggtgatattgtaggtctttgtgactcacaaggctctgggcaatcttcagaccag
cttgccactggtattgtaacacgtgtcacacagaaagccatcaccgttgcatttgatgag
tctcatgatggtttgaaccttgatagagagagtccttattgtctactaaaactagctaat
gatgtcacctataaaaggctaaaaaatgctttaaactccctgagtcaatacagttctggc
cctgcttctaaccttattggagtccttttcaactactttgagccaagctgttccttggag
caaagacagttagagctgtataacacctccttggataattcccagaaggaagcagtttat
ttctccctctcccagaaggaacttgctattatccatgggccccctggtactggcaaaact
accactgttgtggaggttgttcttcaggcagtgaaacaaggtctgaaggttttgtgttgt
gcaccttccaatgttgctgtagataacctgatcgagcggttagctgaatataaaacaaaa
gtgctccgtttgggtcatcctgcacgtctgttggagtccatacagcgtcactgtctggat
gcagtactagcgcacagtgataacacccagattgttgcagatatcagaagggacatcgat
cagagttttgcaaaactcaagaaaacacagaacaaaggagagaaaagtcattttcgaatt
gagatcaaggcactaaggaaagaactgaaagagagagaagaggctgctatgatacagatt
cttaagcatgcacatgtgattcttgcaacaaacacaggtgcatctaatgatggtccactg
aagctactcccggaagattactttgatttggttgtgattgatgagtgtgcccaagctttg
gaagcaagctgctggattcctctacttaaagcccccaagtgtatcctggctggagatcat
aaacagcttccacccacaatcatttcgcacaagttagttggagctcatttaggatttaca
ataagttggcaaaagtactcctgcaatacagaaggaaaggatatgccaagcattgcttcc
actgatgaaacggagctccctctgctactcgtggacacctcaggctgtggtctgtttgaa
ctagatgtggaagatgaacagtcaaaagggaatcaaggagaagtacagattgtcgccagg
cacatagatgcattagctgaagctggcgttaatgctaaagatattgcagtcattgcacca
tataatctccaggttgaaatgctgagacaacagctttgtcacagacatcctgagctggaa
atcaaatcagtggatgggtttcaggggagagaaaaagaagcagtggtgctgtcattagtg
agatctaatacaaagggggaagtaggttttcttgcagaagatcgaaggataaatgttgct
gtcacccgagctcgccgtcacttggcagtggtctgtgacacgcaaactgttagctgccac
aaattcttaaagtctttggtggattatatgacagaacatggagaggtcaggacagctttt
gagtacctcgatgacattgtaccacagaactgctcccatcaagcctctgactctcactgt
gagccacaagggcaaaacaaggccaaagaagcttcaaccaaacaaaaagctaatcatgag
caacagagaagacaaaaaacaaataaaatcaaaaagaccattgcaaacagcagaccttct
ccagatcccttaggtataaaaaatgttccagagggaaatgtcagcagcacccaggatttt
ctggatcaggccaaagtaaaagtagtatcagaagagaatgaaaataaactcagggcaatg
ataatggaatttttggctgacagtaaaagtataaaattagaatttcctccttctttaaac
tcccatgacagactgttggtccatcaaatggcagaagaactggggatccaacatgtgagt
gtcggagaagccgaagatagatacatagttgtgagtaaaccagggctcttggacacacag
gaggagacagatactgacattaagggagaacagttacatcataagtctgcatgctctgag
gaagacactcgttctaaaatgaaagacaacggtaggtcaagggaagatagcagttctact
acagtggatctaaaggctttacatatgcaaaggatgcagagggaacagatgaaacgtgaa
gagaaggctaaaataaaaaaggaacttagtgcaaccatgcaacagaaggtaaaagcttca
gaaaaggagaaaggtccctttaaatcaggagctgttgctgctactgaagatgattttgat
gccttaattgcctctgtggtgaaagcagatagtacttgtggattctccaggtgtaaagct
agtgtggtgaccctgggtcagttctgtgtacactgtaacaagcgctactgtctcagccac
cacatcccagagattcatggctgtggagagaaagcaaaagctcaggctcgtatgagaatc
agcagggaaggtgttttgtatgctggcagtggatcaaaagaccatttgccggatccaaca
aagaaggcccatctccagagaaagctggacaagaaactcactgactttgctgctcaaagg
aagagcaagaaaaaagagaaagacaagtaa
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