Latimeria chalumnae (coelacanth): 102365843
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Entry
102365843 CDS
T02913
Symbol
CHM
Name
(RefSeq) CHM, Rab escort protein 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lcm01006
]
102365843 (CHM)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102365843 (CHM)
Prenyltransferases [BR:
lcm01006
]
Protein prenylation
Rab geranylgeranyltransferase
102365843 (CHM)
Membrane trafficking [BR:
lcm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102365843 (CHM)
Endosome - Lysosome transport
Rab GTPases and associated proteins
102365843 (CHM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
102365843
NCBI-ProteinID:
XP_014346750
Ensembl:
ENSLACG00000004227
LinkDB
All DBs
Position
Un
AA seq
689 aa
AA seq
DB search
MAEKLPAEFDVVVQGTGLQESILAAACSRIGRRVLHVDRRSYYGGNWASFTFSGLLSWIE
EYKQGSVVSEETSTWSSEIQENEEAILLNKAADRTITNVEVFCYVSADSEEGGEVGEAGA
LEKQLQTLACAAGTENIDPSETENQEGQSDAAPEGELPSEHPKASDLVSSTQEEDPSALS
LEGNQSVSGAGDQAPAAELPKVPEPKKKALTYAEIVKGGRRFNIDLVSKLFYSRGTLVDL
LIKSNVSRYAEFKNVTRILAFQDGKVEQVPCSRADVFADKQLTVVEKRMLMKFLTFCMEY
EQHPEEYSDFKEKTFSEFLRTKKLTGSLQHFVLHSIAMVSESASIMDGLKNTQHFLQCLG
RYGNTPFLFPLYGLGEIPQCFCRMCAVFGGIYCLRHSIQCLVIDRDSKRCKAVIDSCGQR
IGCDHFIVEDSYLSEEHCRNIQYREISRAVLITDRSVFKADSNQQVSLLTMPPSEGRSAV
RVIELSSSSMTCMPGTYLVHLTSPSVRSAKEDLEPIVSQLFIQYSEDDTGCALNTEEEEK
PRLLWALYFNMRDSSGVDRSLYEGLPDNVYVCSGADPALGSDCAVKQAESIFCQLFPEAE
FCPPAPNPEDIVYDADGSQPGDAGFGTPVEAEAKPEEDAAHGEEREGETAETKEEGSGTR
KEEEVETLEPQTETCSSADPTPPNKTEQA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaagctgccggccgaattcgatgtggtggtgcagggaacaggtcttcaggag
tccattctcgcagctgcttgctccaggattgggcggagggttttacatgttgacaggagg
agctactatggaggaaactgggccagtttcaccttttctggtttgctgtcttggatagag
gagtacaagcaagggtctgtcgtcagcgaggagacttcaacatggagctccgagatccag
gaaaacgaggaggctattctcttaaacaaggcagcagatagaaccatcacaaatgtagaa
gttttctgttatgtaagtgcagattcagaggaaggaggagaggtcggggaagccggtgca
ttggagaaacagctgcaaactttggcttgtgctgccgggaccgagaacatcgatcccagt
gaaacggaaaaccaggaaggtcagtcggatgctgcacctgaaggcgaattgccctctgag
cacccgaaagccagcgacctggtgagctcaacacaagaggaggacccatcggccttgtca
ctggaaggaaaccagtctgtctcaggagcaggggaccaagcccccgctgcagaattgcca
aaggttcccgaaccaaaaaagaaagccctcacttacgccgagattgtcaaaggcggcaga
cggtttaacattgatctggtgtcaaagctcttctattcccgtggcactctcgtcgacctc
cttatcaagtccaacgtcagccgctacgcagagttcaaaaacgtcactcggatcctcgcc
ttccaggatggaaaagtggaacaggtgccctgttcccgagcggacgtgtttgccgacaag
cagctgactgtggtggagaaaagaatgctcatgaagtttctcaccttctgcatggagtac
gaacaacaccctgaggaatactcggatttcaaagaaaagacattttctgaatttctgagg
accaaaaagttaacgggcagtcttcagcactttgtccttcactccatcgccatggtctcg
gaaagtgccagcatcatggacgggctgaagaacacgcaacatttcctccagtgccttggg
cgctacgggaacacccctttcctcttccccctgtacggactcggagaaatcccccagtgc
ttttgcaggatgtgtgctgtctttggcggcatctattgccttcgtcactccatacagtgt
cttgtgattgatagagactccaaaagatgcaaagcagtaattgacagctgtggccagaga
atcggctgtgaccattttattgtggaagatagctacttgtcagaggaacactgccgaaat
atacagtacagggagatctccagggcggtgcttattacagatcgatccgtcttcaaggca
gattccaatcagcaggtctcccttctaacaatgccaccgtcagaaggccgttctgcagtc
cgtgtcattgagctctcctcctcgtctatgacatgcatgccgggcacctacttggtccat
ctcacgagcccatctgtcagaagtgccaaagaagacctggaacccattgtttcccagctg
tttatccagtattctgaggacgacaccggctgtgcactgaatactgaagaggaggagaaa
ccccgattactgtgggctctatattttaacatgagagattcgtctggggtggacagaagt
ctgtacgaaggtttgcctgataatgtgtacgtgtgttctggagcagaccctgcacttggc
agtgactgtgctgtcaaacaggctgaatccatcttctgtcagctctttcctgaggcagag
ttttgccctcctgcgccaaaccctgaagacattgtctatgatgcagatgggtcacagcca
ggagatgctgggtttggcactccagtggaagctgaagctaaaccagaggaagatgctgca
catggggaagagcgtgagggcgaaacagctgagaccaaagaagagggaagcggcactaga
aaagaggaagaggtggagactctggagccccagacggaaacctgttcctctgctgatccc
acaccaccaaacaaaacagaacaagcttaa
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