KEGG   Latimeria chalumnae (coelacanth): 102365987
Entry
102365987         CDS       T02913                                 
Symbol
SORT1
Name
(RefSeq) sortilin 1
  KO
K12388  sortilin
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04142  Lysosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    102365987 (SORT1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 GAPT
Other DBs
NCBI-GeneID: 102365987
NCBI-ProteinID: XP_014341441
Ensembl: ENSLACG00000015550
LinkDB
Position
Un
AA seq 814 aa
MRSGSLRLLWWVFPLVVGWGLAATSRLPERGAQGADSPDSGPQSLRDVSRRSSGELQQEG
SAESSCSNRSGSESNLAKNTHQYNFEDLSGLVSLAWVGDGTGILLALTTFQVPLRWITFG
QSKLYRSEDYGKTFSDITHLINNTFIRTEFGIAIGPENSGKVILTGDVSGGSLGGRIFRS
LDFGKHFIRTDLPFHPLTQISYHPKNFSILLALSIKNTLWLSSNFGETWTNLHDFVCLVK
WGHGDMIYFTTHTNKTCLDRGQLELRKTTDFGKTFETIGSKIYSFGIGGRFLFASVMTGK
ENLRMIQVSVDEGESWNIAQLPPVGHEQFYSILAANDDMVFMHVDEPGDTGFGTIYTSDD
RGVVYSKSLERHLYTTTGGETDFTNVTSLRGVYITSVLSEADESVQSVISFDQGGEWKPL
RKPDNAVCDSTAKNKDECSLHIHASYSIAQKVNVPMLPLSEPNAIGLIIAHGSVGDAISI
MKPDVYVSDDGGYSWMKVLAGPHHYAILDSGGLIVAVEHSQLPISVIKYSTDEGQCWYSY
KFTSEPVYFTGLASEPGAKSMNVSIWGYKKGLLALYWISITIDFEELLTRDCQDEDYTKW
LAHSSDLNDPSDGCILGYKEQYRRLRKAAVCRNGRGYIVVKQPSVCICTLADFLCDFGYY
RPENQSECIEQLDLKGHDLEFCLHGKQELLLTSGYRKIPGDKCEGGAMPSRTVKDMRTKC
TSNPMEPSQLSKNSSSNSALIIVAVVLLLVIATIGGVLFIKKYVCGGRFLVHRYSVLQQH
ADANGIDIADELDATLSSRGKSNYHDDSDEDLLE
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgcggtcgggcagtttgcggttgttgtggtgggttttcccgttggtggtgggctggggc
ctagcggcgacttcccggctaccggagaggggcgcccagggggccgacagtccggactcc
ggcccgcagtcccttcgggacgtctccaggagaagctccggggagctgcagcaggagggc
tcggcggagagcagctgctccaaccgcagcggatcggagagcaacctggccaaaaacacc
caccagtacaattttgaggatctgagtggcttggtatcactggcctgggtgggagatgga
actgggattctacttgctttgacaacattccaggtgcctttgagatggataacttttggc
cagtctaaactttacagaagtgaggactatgggaaaaccttctctgacatcactcatctc
atcaataacacatttattcgtacggaattcggtattgccattggacctgagaattcgggg
aaggtaatcctaactggagatgtgtctggaggaagcctgggtggcaggatctttaggtcg
ctggattttggaaagcactttatccgcacagatcttccatttcatcctctgacgcaaatc
tcgtaccaccccaagaactttagcatcctgttggcacttagcattaaaaataccttgtgg
ctctcgagcaactttggagaaacatggacaaaccttcatgactttgtttgccttgtgaaa
tggggacatggagatatgatctatttcacaactcataccaataaaacctgcttagacaga
ggacaactggagctgagaaaaaccacagactttggcaaaaccttcgaaactattggaagc
aagatctactcctttggaattggaggccggttcctgtttgcttctgtaatgaccggaaag
gagaatttgaggatgatccaggtctctgtggatgagggggaaagctggaatattgcacaa
ttaccccctgtgggacatgagcagttctactccatactggcagccaatgatgatatggta
ttcatgcatgtagatgaaccaggcgacactggatttggcacaatctacacctccgatgac
cgaggtgtcgtgtactcgaaatccctggagcgacatctttatacaacgacaggtggtgaa
acggactttactaatgtgacatccctgcgtggagtctacataaccagtgtcctttctgaa
gcagatgagtctgttcagtctgtgatctcgtttgatcagggaggagaatggaaacccctg
aggaagcctgacaatgctgtgtgtgactccactgccaaaaacaaagatgagtgtagcctc
catattcatgcctcctacagcattgcccagaaggtgaatgtcccgatgcttccgctgtcg
gaacccaatgctattggactcatcatagcacacggcagcgtgggagatgccatatccata
atgaaaccggatgtttatgtatcggacgatggtggttactcatggatgaaggtgctggct
ggaccacatcactatgccatcctggactctggaggactcattgtggctgtggaacatagt
caactccccatcagtgtcataaagtattccactgatgagggccagtgttggtattcttac
aagtttaccagtgagccggtttatttcacaggcttggcgtccgagccaggtgccaaatcc
atgaacgtcagcatctggggatacaagaagggccttctggctctgtattggatttccatt
accattgactttgaggagctcctgactcgagattgtcaagacgaggactataccaagtgg
ctggcccattccagtgatctcaatgaccccagcgatggctgcatcctggggtacaaagaa
caataccgccgtctgcgcaaagctgcagtctgcaggaatggcaggggctacattgtagtc
aaacagccctccgtctgcatttgtaccctagcggacttcctgtgtgattttggttactac
cgtccagagaaccagtctgagtgtatagaacaactggatctgaagggtcacgacttggaa
ttctgtctccatggcaaacaagaattgctgctaacgagcggataccgcaagattcctgga
gacaaatgtgaaggaggagccatgccaagcaggacagtcaaggatatgcgaacaaaatgt
accagtaacccaatggagccgtcccagctgtccaaaaattcatcttccaactctgcactg
atcattgttgctgttgtgctgttgctggtgattgccacaattggaggtgtcctcttcatc
aagaaatacgtttgcggaggaaggtttttggtccatcgctactctgtgctccagcaacat
gctgacgctaatgggatagatatagcagacgaactggatgccaccctaagcagcagaggg
aaaagcaattatcatgatgattctgatgaggatttgcttgaataa

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