Latimeria chalumnae (coelacanth): 102366022
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Entry
102366022 CDS
T02913
Symbol
GATAD2B
Name
(RefSeq) GATA zinc finger domain containing 2B
KO
K23194
transcriptional repressor p66
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102366022 (GATAD2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102366022 (GATAD2B)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102366022 (GATAD2B)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102366022 (GATAD2B)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
102366022 (GATAD2B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
FAM76
HscB_4_cys
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
102366022
NCBI-ProteinID:
XP_014347300
Ensembl:
ENSLACG00000013888
LinkDB
All DBs
Position
Un
AA seq
591 aa
AA seq
DB search
MDRITEDTLCLNLLKRGLDQAEERDDILAKRLKMEGHEAMERLKMLALLKRKDLSGVEVP
HDLPVKSDSVKTYEEKVNGNLRPHLEGRTAGRAGKENIGDEPVDMSSRKSDPDHERLTPS
PDVIVLSDNEVSSPRCSSRMEEMLKSANLEMFKGKDTEERQQIIKQLRDELRLEEARLVL
LKKLRQSQVQKENVVQKTPVVQNAASVVQPSPAHSGQQVLSKLPSRPGVQGVEPQNLRTA
QSHSVIRSATNSNLPHLLMSQRVIAPNPAQLQAQRVTPKPSLVRTTTPNLSAAVSYQQQS
SSSVPSPRTSSSAIYMNLPAHIQQGAVNRVSSPLPSPSALSDPASSQAAAKLALRKQLEK
TLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKGCLPLARVDPFFCAQ
CRTDFTPHWKQEKNGKILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQ
AALSPTAAPTVTSLNKQESIIRHHSLRQAPQPQPPLQRGLHASARTMLSNFAQGPPLSVA
GGLLGMPGVNIAYLNAGVGGHKASSLADRQREYLLDMIPPRSISQSISGQK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggatagaattacagaagacacgctgtgcctaaacctgctgaaacggggccttgaccag
gcagaggagcgtgatgacatcctggcaaagcgactgaaaatggaaggccacgaggcaatg
gagaggctgaagatgctggcactgctaaagaggaaggacctctcaggggtcgaagtgccc
catgacctgcctgtcaaatcggactcagttaagacgtacgaggagaaagttaatgggaat
ctgagacctcacctggaaggcaggactgctgggagagcagggaaagaaaacattggtgat
gaacctgtggatatgagctctagaaagagcgatccagatcatgaacggttaaccccttct
ccggatgtaatcgtcctttctgataatgaggtttcaagcccacgctgcagttcccgcatg
gaggagatgctaaagtctgcaaatctcgaaatgtttaagggtaaagatacagaagaacgg
cagcagatcatcaagcagctccgagatgagctgcgacttgaggaggccaggctagttctg
ctgaaaaaactgcggcaaagtcaggtccagaaggagaatgtagtacagaagacgccagtt
gtccagaatgcagcatctgttgtccagccctctcctgctcatagtggacagcaggttctg
tccaaactaccctcccggcctggagttcagggggtggagccacagaacttaagaacagca
cagagtcacagtgtaataaggtctgctaccaattccaacctgccacacctgctgatgtca
cagcgtgtaatagcccccaacccagcccagttacaggcccagcgggtgacccccaaaccc
agcctggtccgcactacgacccctaacctcagcgcagctgtgagttaccagcagcagtcc
agctcatctgtaccttcgccacgcacctcgtcctctgccatctatatgaacctgccagcc
cacatccagcagggagctgtgaacagagtgtcctcccctctgcccagccccagcgccttg
agtgacccagccagttctcaggcagctgctaagctcgccttgcgcaagcagctggagaag
acactcctggagatcccgcctcccaagcctcctgctccgttgcttcactttctgcccagc
gctgccaacagcgagttcatttacatggtggggttggaagaagtggtacagagcgttatt
gacagccaaggtaaaggttgccttcccttggcacgtgtggaccccttcttctgcgctcag
tgtcgtacagacttcaccccgcactggaagcaggagaagaacgggaagatcctgtgtgag
cagtgcatgacatccaatcagaagaaagcgcttaaagcagagcacaccaacaggctgaag
aacgcctttgtgaaggctctacagcaggagcaggaaattgagcagagattgcagcagcag
gcagcactatctcctactgcagctccgactgtgaccagcctcaacaaacaggagagcata
atcaggcatcacagcctccggcaggctccacagccccagccacctctacagaggggtctt
cacgcctctgcccgcactatgttatctaattttgctcaggggcctccactgtctgttgca
gggggtctccttggtatgccaggtgttaacatagcctacctgaatgcaggggttggaggt
cacaaagcgtccagcttggctgaccggcagcgcgaatatctcttggacatgatcccacca
cggtctatatcgcagtccataagtggtcagaaataa
DBGET
integrated database retrieval system
