Latimeria chalumnae (coelacanth): 102366338
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Entry
102366338 CDS
T02913
Symbol
LINGO3
Name
(RefSeq) leucine rich repeat and Ig domain containing 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102366338 (LINGO3)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102366338 (LINGO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_RPS2
V-set
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
102366338
NCBI-ProteinID:
XP_005993838
Ensembl:
ENSLACG00000007372
LinkDB
All DBs
Position
Un
AA seq
602 aa
AA seq
DB search
MSLCWPQILGLTLMLLITKSVVGCPARCDCAPQVRSVACPRKRLTAVPEGIPTETKVLDL
SKNKLRCLSPGDLTPYPSLEEIDLSENVISIVEPGTFSNLFNLRVLRLRSNQLKLISTGV
FTKLTNLTLLDLSENKLVILLDHMFQDLRNLRNLEVGDNDLVYISQKAFVGLLGLEQLII
ERCNLTSISAEALSHLQNLVILRLRYLSISSVESQNFKKLYNLKELEIDNWPLLESISPT
CFQGLNLTSLSITYTNITSVPSAALRNLAHLAYLDLSYNPISTIEPGSFRELIRLRELHI
VGASLITVEPHAFYGLRQFRLLNVSNNFLVTLEENAFHSVNSLETLRIDKNPISCDCRLL
WILQRRKTLNFDGQQPVCTSPIEIQGTALRDFPDSILFDYFTCQKPRIRDRKLQHITARE
GQSVSFLCRADGEPVPAIIWVSPQRRMITTKSVGRATVLPEGTLEIRFAQVHDSGTYICI
ASNAGGNDTYFATLTVKGYPADGSLYANRTLYLHEFNDTLHNDTQIFLKFTLDLKTILVS
TAMGCITFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVEGPTTSSSQGGTRKFNMK
MI
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatgctggccacagattctgggtctaactttgatgcttctaatcaccaagtca
gtggtgggctgcccagctcgttgtgactgtgcccctcaggtcaggtcagtggcatgccct
cggaaacgcctgactgccgtccctgaagggattccaacagagactaaagtcctggacctc
agcaagaataagctaaggtgcttgagccctggggatctaactccttacccctctctggaa
gaaattgacctgagtgagaatgtgatctccattgttgagcctggaaccttcagcaacttg
ttcaacttacgtgtgttgcgcttgcgaagcaatcagttgaaactcatctctacaggggtt
ttcacaaagctgaccaacctaaccctcttggacttgagtgaaaacaaactggtgattttg
ttggaccacatgtttcaggatctacggaacctgaggaacttggaggttggcgataatgat
ttggtctacatctcacaaaaggcttttgttgggcttttgggccttgaacagcttataata
gagagatgcaatctgacatcaatatctgcagaggccctttctcacctccagaatttggtc
attcttcggcttcgctacctcagtataagttctgtagaaagtcagaatttcaaaaaactg
tacaacctgaaggaacttgaaattgacaactggccacttcttgaaagtatttccccaaca
tgctttcaaggcctaaaccttacttcactctctataacttataccaacattacttccgtt
ccttcagcagctcttcgaaatttggcacatcttgcttacctggatctttcctataatccc
attagtaccattgaacctggctccttcagggaacttataagactccgcgaactacatatc
gtcggtgcttcattgattacagtagagccacatgctttctatggcttgagacaattccgc
ttgttgaatgtttccaacaattttctggtcacattggaagagaatgctttccattctgtg
aatagcttggagaccttacgcatagataagaacccaatctcctgtgactgtcgccttcta
tggatcttacagcgcagaaagaccctcaactttgatggccaacagccagtgtgcacctct
cccattgaaattcagggtactgctctcagagacttccctgactccattctttttgactac
ttcacctgccaaaagccaagaataagagacaggaagcttcaacacataacagctcgggag
ggacagtctgtttccttcctttgccgagcagatggagaaccagttccagcaataatttgg
gtttctcctcagcgtagaatgatcaccacaaagagtgtgggtcgagcaacagtacttcct
gagggcaccttggagatccgatttgctcaagtccatgatagtggtacatatatttgcatt
gctagcaatgctggggggaatgacacttattttgcaacattgactgtcaaagggtaccca
gcagatggatccctctatgcaaacaggactttatatctccatgagttcaatgacactctt
cacaatgatactcagatctttctgaagttcactcttgatcttaagactatcctggtttcc
acagcaatgggatgtatcactttccttggagtggtgctcttctgttttatacttctcttt
gtatggagccgaggaagagggcagcacaagaacaacttttctgttgaatactccttccgc
aaggtagagggtccaacaactagcagtagccaaggaggtacaaggaaattcaacatgaaa
atgatatga
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