Latimeria chalumnae (coelacanth): 102366404
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Entry
102366404 CDS
T02913
Symbol
FXR1
Name
(RefSeq) FMR1 autosomal homolog 1
KO
K15516
fragile X mental retardation protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102366404 (FXR1)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102366404 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
102366404 (FXR1)
mRNA cycle factors
Stress granule specific factors
102366404 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
FXR_C3
Tudor_FRX1
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
102366404
NCBI-ProteinID:
XP_005991964
Ensembl:
ENSLACG00000011290
UniProt:
H3AT50
LinkDB
All DBs
Position
Un
AA seq
679 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFVKDVHDDSLTIVFENNWQPERQVPFSDVRLPPPSDVKKEIS
EGDEVEVFSRANDQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTYERLRPVNQNSS
VTKSTFFKCTVAVPEDIKDVCANENAHKDFKKAIGACRIFYCAEENQLVILSTNEATVKR
VSMLSDMHLRSIRTKIMLMSRNEEATKHLESTKQLAAAFHEEFTVREDLMGLAIGTHGSN
IQQARKVSGVTAIELDEDSGTFRIYGESAEAVSKARSYLEFVEDAVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDSKFPREEGMVPFIFVGTKECIGNVQVLLEYHIAYLKE
VEQLRMQRLQIDEQLRQIGMGFRPSSSRVAEKDRGYTTDDSTASSAHGTRSYSGRGRGRR
GPNYTSGYGTNSELSNASETDSERKDELSDWSLAGEDEKETRQQRDSRRRPGGGRGRGGP
GSRGRGGSRGGGSSISSVLKDPDSNPYSLLDNTETDQTADTDASDSHHNTNRRRRSRRRR
TDEDATLMDGMTESDNASVSENGIDDSARKPQRRNRSRRRRFREQVEERQPVTVADYISR
AESQSRQRNAPRENLAKNKKGMAQDVIEEHSTSGNALNGPCNASGDESSKPLRTSKERTQ
KGSYQGDGNQQQTMLNGVS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgacagtggaggtgcgcggctctaacggagctttttacaagggatttgtt
aaagacgttcatgatgattccctcacaattgtctttgaaaacaactggcaaccagaacga
caagttcctttcagcgatgtgcgattaccacccccttcagacgtaaagaaagagatcagt
gagggtgatgaagtggaggttttttccagagcaaatgatcaggagccctgtggatggtgg
cttgccaaagttcgaatgatgaaaggagatttttatgttattgagtatgctgcttgtgat
gcaacctacaatgaaatagtcacgtatgaacgccttcggcctgtaaaccaaaacagttct
gtaacaaagagcaccttctttaaatgcacagtggctgttcctgaagatattaaagatgta
tgtgctaatgaaaatgcccataaagacttcaagaaagccattggagcttgtcgaatcttt
tactgtgctgaagaaaaccaacttgtgatattgtccacaaatgaagcaacagtgaagagg
gtcagcatgttgagtgacatgcacttgcgcagcattcgtacaaaaatcatgctcatgtca
aggaatgaagaggcaacaaaacatttggaaagcacaaagcagcttgctgctgcttttcat
gaggaattcactgtccgggaagacctaatggggcttgcgataggaacacatggcagtaac
atccagcaagctaggaaggtttctggagtcacagcaattgaactggatgaagactctggc
actttcaggatttatggagagagtgctgaggcagtaagcaaagccagaagttacttggaa
tttgttgaggatgctgttcaagttccaagaaatttagtaggtaaggtcattggcaaaaat
ggaaaggtgattcaagagatcgtagataagtctggagttgtcagagtacgaattgaaggt
gacaatgacagcaaatttccaagagaagagggaatggttccttttatatttgttggtacc
aaggaatgtattggaaatgttcaagttctcttagaataccacattgcttacctgaaggaa
gtagaacagctgagaatgcaaaggttacagattgatgaacagctgcggcagattggaatg
ggttttaggccctcttctagcagagttgcagaaaaagacaggggctacacaactgacgac
agcacagcttcctcagcgcatggtaccaggtcatacagtggaagaggtcgcggtcgcaga
ggcccaaattatacttctggctatggtacaaattctgagctgtctaatgcatcagaaact
gactcggagaggaaggatgaactaagtgattggtcactggctggggaagatgaaaaggaa
acacgacagcaacgtgacagcagaaggcggccaggaggaggaagaggacgaggaggacca
gggagtcgtggccgtggtggttcccgtggtggaggttcttctattagctctgtgttaaaa
gacccagacagcaacccttacagtttactggataatactgaaacagatcaaactgcagac
accgatgcaagtgattcacaccacaatactaatcgtcgcaggaggtcacgcaggcgtaga
acagatgaagatgcaacactgatggatggaatgacagaatctgataatgcttctgtcagt
gagaatggcatagatgatagtgcaagaaagccccagcgacgcaatcgcagccgcaggcgt
cgctttcgtgagcaggtggaagagagacagccagtaactgtagctgattacatatctcgt
gctgaatctcaaagtaggcaaagaaatgcaccaagggagaatttagctaagaacaagaaa
ggcatggcacaagatgtaattgaagaacacagcacctctggaaatgctctcaacggccct
tgcaatgcttctggtgatgaatcctctaagccgctgcgtacttcaaaagaaagaacccag
aaaggcagctaccaaggagatgggaaccagcaacaaactatgctgaatggcgtttcgtaa
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