Latimeria chalumnae (coelacanth): 102366405
Help
Entry
102366405 CDS
T02913
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102366405 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102366405 (CSTF2)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102366405 (CSTF2)
U7-dependent histone pre-mRNA processing factors
102366405 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102366405
NCBI-ProteinID:
XP_014341592
Ensembl:
ENSLACG00000015927
LinkDB
All DBs
Position
Un
AA seq
556 aa
AA seq
DB search
MMMAGLAARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKG
YGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDS
VLPDEAPESISRAVASLPPEQMFELMKQMKLCIQNSPQEARNMLLQNPQLAYALLQAQVV
MRIVDPEIALKMLHRQTNVPSLAPSGQPAPVPNAPLPQQAPPGPSQPQQMGGMHMNGAPP
GMQPPSMQAGVPGPGPGSVVPGAGIQPQIVIPQGGPLPMERGQGTMQHSPVGPGGPAPIE
RAQVPMQDPRGPMQRGPPVSAAPLPRGLLGDGPNDPRGGTLLSVTGEVEPRGYLGPPHQG
PPMHHVPAGHENRGPPPHELRGGPMGEPRGGPLGEPRGGPLGEPRGGPLGEVRGGPMGEP
RGAPVGMMGEPRGPMLDQRGPPVDSRGGRDPRGLDARGPGPAPRGPIPGGMQGPGPHSMG
ATGPQGPRQGPGMPVGGQSGGFSPGQGQVTPQDHEKAALIMQVLQLTPDQIAMLPPEQRQ
SILILKEQIQKSTGAS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcgggtttggcagcgcgggaccccgcggtggacaggtccctccgctcggtt
tttgtggggaatattccatatgaagctactgaggaacaactgaaggacattttttccgag
gttgggccagttgtcagtttcaggttggtgtatgacagagagacgggtaaaccgaaagga
tatggattctgcgagtaccaggatcaggaaactgccctcagtgccatgcgcaatctcaac
gggcgggagttcagcgggagggccttgcgagtggacaacgctgccagcgagaaaaacaaa
gaggagttaaaaagtctggggacaggcgcacccatcatcgagtcaccgtatggcgactca
gttttacccgacgaggcgccagaatcgatcagccgtgctgttgcgagtcttccgcctgaa
cagatgtttgaacttatgaagcagatgaagctatgtatccagaacagcccccaggaagct
cgtaacatgttactgcagaaccctcagctggcgtatgctctgctacaggcccaggtcgtc
atgaggattgtagatccagaaattgcactgaaaatgcttcatcgtcagacaaatgttcct
tctctggctcccagcggtcagccggctccagttccaaatgcacctttgccccagcaagca
ccaccagggccatcacagccacagcaaatgggtggaatgcacatgaatggagccccccct
ggaatgcagcccccatccatgcaggccggagtgcctgggccaggacctggctctgttgtg
ccgggagctggaattcagccacagattgttatcccccagggtggccccttaccgatggag
agaggacaaggaaccatgcagcactcgcctgtgggacccggtgggccggcacccattgaa
cgagcacaagtgccaatgcaggaccccagagggcccatgcagcgtggcccccctgtatca
gccgccccactcccaagaggactgctgggagatggacccaatgacccgcgtgggggaacc
ctgctttctgtcacaggagaagtggaacccagaggttacctgggcccaccacaccaaggg
cctccaatgcaccatgtacctgctggccatgagaacagaggcccaccaccacatgagcta
cgaggagggcctatgggagagccgagagggggacctttgggagagccgagagggggacct
ttgggagagccgagaggggggcctttgggagaggtgaggggtgggccaatgggagagcca
agaggggcccctgttggtatgatgggagagccacggggccccatgttagatcagagagga
ccacctgttgattctagaggtggaagggatcccagaggtcttgatgccaggggccctggg
ccagctcccaggggccctattcctggaggaatgcaggggcctgggccacattccatggga
gctactggtccccaggggcccagacagggtcccgggatgccagtgggaggtcagtcggga
ggattcagcccaggtcagggccaagtaacaccgcaggatcatgagaaggctgccctgatc
atgcaagtgctgcagctaactccggatcagatcgctatgctgcccccagagcagagacag
agcatccttatcctcaaagagcagatccagaaatccacaggagcttcgtaa
DBGET
integrated database retrieval system
