Latimeria chalumnae (coelacanth): 102366596
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Entry
102366596 CDS
T02913
Symbol
CTCF
Name
(RefSeq) CCCTC-binding factor
KO
K23195
transcriptional repressor CTCF
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102366596 (CTCF)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102366596 (CTCF)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102366596 (CTCF)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102366596 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
zf-C2H2_ZN142
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
102366596
NCBI-ProteinID:
XP_005992836
Ensembl:
ENSLACG00000009833
UniProt:
H3ANF3
LinkDB
All DBs
Position
Un
AA seq
773 aa
AA seq
DB search
MQIYCTFLFLRERGREKMENEPSEVILEENETFSKGKERKTYQRRREGGQEEDNGAVIQN
HPDGIEVVQDLQNQPDGTEEAQDLQNQSDGIEAQDVNSNVQMVMMEQLDPTLLQMKTEVM
EAGVNQEGEATVDDTQIITLQVVNMEEQPISLGELQLVQVPVPVSVPVTATTVGQLQGTY
ENDVSKEGLQGEPVICHTLPLPEGFQVVKVGANGEVETLEQEELQPPPPQEDPNWAKDPE
FQPPAKKKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKI
KKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHT
GTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGER
PFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKF
HCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKC
DQCDYACRQERHMIMHKRTHTGEKPYACSHCEKTFRQKQLLDMHFKRYHDPTFVPATFVC
TKCGKTFTRRNTMARHAENCTGPDSVEGENGGEPKKSKRGRKKKMRSKRDDSSGSDENAE
PELDDIDEEEEEAVVINDEEMEGGPEALPAPPPAKKKRGRPPGKSNQAKSTQTAAIIQVE
DQNAGTIENIIVEVKKEPDTEEEEGEVEQAQPVVVEAPNGDLTPEMILSMMDR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttactgcacttttcttttccttagagagagagggagagagaaaatggaaaat
gaaccaagtgaagtaattttggaggagaacgaaactttctccaagggaaaggaacgtaaa
acttatcaaaggcgtcgtgaaggtggacaggaggaggacaatggtgctgtcatacagaac
catccagatggcattgaagtagtccaagacctacagaatcagcccgatggcaccgaagaa
gcccaagacttgcagaatcagtctgatggcattgaagcccaagatgtgaacagtaatgtc
caaatggtcatgatggaacagttggacccaacactccttcaaatgaagaccgaggtaatg
gaggctggagtcaaccaggagggagaggccaccgtggatgatactcagatcatcacgctg
caggtggttaacatggaagagcagcccattagccttggagaattgcagttagtacaggta
cctgttccagtgtctgtaccagttactgccacaactgttggacagcttcagggcacttat
gagaatgacgtttcaaaagagggccttcagggtgagcctgtgatctgtcacactcttccc
ttgccggagggtttccaggtagtcaaagtgggtgcgaatggggaagtggagactttggaa
caggaagagctgcagcccccgccacctcaggaagaccccaactgggcgaaagatccggaa
ttccagccgccagccaaaaagaagaaaaccaaaaagagcaaactgcgctacactgaagag
ggcaaagacgtggatgtgtcagtctatgactttgaagaagagcagcaggaaggattgctg
tctgaagttaatgctgagaaagtggttggaaatatgaagcctccaaaaccaacaaaaatt
aaaaagaaaggtgtgaagaaaacattccagtgtgagctgtgtagctacacctgcccaaga
cgttcaaacctggaccgtcacatgaagagtcacactgatgaaagaccacataagtgccat
ctctgtggcagagcattcagaactgtgacactgctgagaaaccacctcaacacccacaca
ggtactagacctcacaagtgccctgactgtgacatggcttttgtgaccagtggagaactg
gtgagacaccgccgttacaagcacacccatgagaaaccatttaagtgttctatgtgtgac
tatgctagtgtggaggttagcaagttgaagcgtcacattcgctcccatactggagagcgt
ccattccagtgcagcttgtgcagctatgccagtagagatacctacaagctgaagaggcac
atgagaactcactctggagagaagccttatgaatgttacatctgtcatgctcgctttacc
cagagtggtactatgaagatgcacattctacagaaacacactgaaaatgtggccaagttt
cactgccctcactgtgacactgttattgctagaaaaagtgacttaggtgtccatttaaga
aaacaacattcctatattgagcagggcaagaagtgccgttactgtgatgcagtgttccat
gagcgctatgctcttatccagcatcagaaatctcacaagaatgagaaacgctttaagtgt
gaccagtgtgactatgcatgcaggcaggagcgtcatatgataatgcataaacgcacccat
actggagaaaagccttatgcttgcagccactgtgaaaagacatttcgccagaaacagctg
ctggacatgcacttcaaacgataccatgaccctacgtttgtccctgctacctttgtctgc
acaaagtgtggtaaaacattcactcgcaggaacaccatggctagacatgctgaaaactgc
actggcccagattctgtagaaggggaaaatggaggcgagcccaagaaaagcaagcgtgga
aggaagaaaaagatgcgtagcaagagagatgactcttctggcagcgatgagaatgcagag
cctgaattggatgacatagatgaggaggaagaggaagctgtagtgataaatgatgaggaa
atggaaggaggtccagaagcgcttccggctccacctcctgctaaaaagaaacggggaaga
ccacctggcaagagcaaccaagcaaaatcaactcagactgcagcaattattcaagttgaa
gaccagaatgctggaactattgagaacattattgttgaagtcaagaaggagccggatact
gaagaggaggaaggggaggttgaacaggctcagccagtggtggtggaggcaccaaatggc
gatctgacccccgagatgatcctcagcatgatggaccggtga
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integrated database retrieval system
