KEGG   Latimeria chalumnae (coelacanth): 102366756
Entry
102366756         CDS       T02913                                 
Symbol
RAE1
Name
(RefSeq) ribonucleic acid export 1
  KO
K14298  mRNA export factor
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102366756 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102366756 (RAE1)
   03036 Chromosome and associated proteins [BR:lcm03036]
    102366756 (RAE1)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102366756 (RAE1)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102366756 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WDR55 WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 eIF2A Beta-prop_IFT140_1st Beta-prop_Nup120_160 NBCH_WD40 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 102366756
NCBI-ProteinID: XP_005990646
Ensembl: ENSLACG00000017740
LinkDB
Position
Un
AA seq 368 aa
MSLFGTSSGFGTGTTSMFGSTATDNHNPMKDIEVTSPPDDSISSLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHAGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPIKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSATPMMTLQLPERCYCADVVY
PMAVVASAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPIGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNSSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtttgtttggaacaagctcagggtttggaacgggaaccaccagtatgtttggaagt
acagcgactgataatcacaatcccatgaaggacatagaggtaacttctcctcctgatgat
agcattagtagccttgccttcagcccaccaacattgccgggtaacttcctaatagcaggg
tcatgggcaaatgatgtgcgctgttgggaggttcaggataacggacagactattccaaaa
gctcagcagatgcatgcaggcccggtgctagatgtctgctggagtgatgatgggagcaaa
gtatttacggcatcatgtgacaaaactgccaaaatgtgggatctcaacagtaaccaggct
atacagattgcccagcacgatgcacccatcaagactgtccactggattaaagcacctaat
tacagctgtgtaatgacaggaagttgggataaaacattgaagttttgggatactcgatct
gcaactcctatgatgacattacagcttcctgaaagatgctattgtgctgatgtggtgtat
cctatggctgttgtggcatctgcagagagagggttgattgtttaccagctagaaaaccag
ccctcagaatttagaagaatagactcacccctgaaacaccagcatcgctgtgtggccatc
tttaaagataaacaaaacaagccaatcggatttgcacttggaagtattgaagggagggta
gctattcactatatcaaccctccaaaccctgccaaagataactttaccttcaagtgtcat
cgttccaatggtaccaattcttcggcacctcaggatatttatgctgtgaatggtatagca
ttccatcctgttcatggcactctggcaactgtggggtccgatggaagattcagtttctgg
gataaagatgctcgcacaaagctgaaaacatctgaacagctggatcaaccaatttctgct
tgctgcttcaatcataatgggaacatatttgcttatgcctccagttacgattggtccaag
ggccatgagttttataatcctcagaagaagaattacatctttctgcgtaatgcagcagaa
gagttgaaacccagaaacaagaaataa

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