Latimeria chalumnae (coelacanth): 102366846
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Entry
102366846 CDS
T02913
Symbol
CNGA1
Name
(RefSeq) cyclic nucleotide gated channel alpha 1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102366846 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102366846 (CNGA1)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102366846 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
XhlA
Motif
Other DBs
NCBI-GeneID:
102366846
NCBI-ProteinID:
XP_006012287
Ensembl:
ENSLACG00000005525
LinkDB
All DBs
Position
Un
AA seq
543 aa
AA seq
DB search
VKKEIYVIDPAGNMYYNWLLCITIPVMYNWTMIIARACFEELQHDYLEWWYIFDYLSDFI
YIADMFVRTRTGYLEQGLLVRDEEKLRETYKKTLQFRLDLLSIVPTDLLFFYFGLNYPEL
RLNRLFRAARLFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYFSISKAIGFGAD
TWVYPDISIPEFARLARKYVYSLYWSTLTLTTIGETPPPVQDSEYVFVVVDFLVGVLIFA
TIVGNVGSMISNMNAARADFQGRIDAIKQYMHFRKVSKDLEKRVIKWFDYLWTNKKAVDE
REVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLRPQVYSPGDYICRKG
DIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSRAGNRRTANIKSIGY
SDLFCLSKDDLMEALTEYPDAKSLLEEKGKQILMKDGLLDLELASAGADPKDLEEKVVRM
EGAIDNLQTKFARLLAGYDAAQQKLKQRVTKIEKKLKPADEPEFSELVDPTTPKSEADPA
PKD
NT seq
1633 nt
NT seq
+upstream
nt +downstream
nt
ggttaagaaagaaatatatgtcattgatccagcaggaaacatgtattacaactggttatt
atgtattaccatacccgtcatgtacaactggaccatgatcattgccagagcttgttttga
ggaacttcagcatgactacttagaatggtggtacatctttgattacctatcagatttcat
ttacattgctgacatgtttgtaaggacaagaacaggttatttggagcaaggtttgctggt
cagagatgaagaaaaactgagagagacatacaaaaagacccttcagttcagattagacct
gctatccatagtacccactgacctactgttcttttattttgggctaaactatccagaact
gagactaaatagactattccgggctgctcgtctgtttgagttcttccagcgaacagaaac
aagaaccaactatccaaatatctttagaatttccaacctagtcatgtacatcgtgattat
tattcactggaatgcttgtgtttacttctcaatttccaaagcgattggattcggagcaga
tacatgggtctacccagatatcagcattccagagtttgccaggcttgctaggaagtatgt
ttacagtctctactggtcaacgttgaccctgaccactattggagaaacccctcctcctgt
acaagactcagagtacgtctttgtggttgttgatttcttggttggagtactgattttcgc
taccattgtcggtaatgttggctccatgatttccaatatgaatgcagcaagggcagattt
ccagggaagaattgatgctatcaaacagtatatgcactttcgaaaagtaagcaaggatct
ggaaaaaagagtgatcaagtggtttgattatttgtggacaaacaaaaaagcagtagatga
aagagaagttctaaagtatcttcctgataagctgagagctgagattgctatcaatgtcca
tcttgacacactaaagaaagttagaatttttgcagactgtgaagctggactactgattga
attggtgctaaaactacggccacaggtgtatagccctggagattatatttgtcgtaaagg
agatattggtcgagagatgtatatcatcaaagaaggaaaacttgctgtagttgctgatga
tggaattacacagtttgtagtcctgagtgatggcagctactttggagaaatcagtattct
taatatcaagggcagtagagctgggaatagaagaactgcaaacattaaaagtattgggta
ctcagatttgttttgcctgtccaaggatgacctgatggaggctctaacagagtatccaga
tgcaaaatccctgttagaggagaaaggaaaacaaatccttatgaaggatgggctgctaga
cctagagcttgcaagcgctggtgctgatcccaaagatctagaggaaaaggtagtccgcat
ggaaggagccatagacaatttgcaaactaagtttgctaggctactagctggatatgatgc
agcacagcagaagctgaagcaaagagtgacaaaaattgagaaaaagttaaagccagctga
tgaacctgaattttctgagctggtggaccctacaacacctaaaagtgaagctgacccagc
accgaaggattaa
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