Latimeria chalumnae (coelacanth): 102367202
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Entry
102367202 CDS
T02913
Symbol
NUP54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102367202 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102367202 (NUP54)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102367202 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
102367202
NCBI-ProteinID:
XP_014354034
Ensembl:
ENSLACG00000004827
LinkDB
All DBs
Position
Un
AA seq
505 aa
AA seq
DB search
LFGNTATTSSGSTGFSFGTASGLGQGFGTTTTTTTAPTGFGFGGTGLFGNTQNKGFGFGT
GFSSGTGTGLGAGLGSGFGGFGTQQQQQQQQQQQPPTLASLFAQPSQPPTQSNQLINTAN
ALSAPTLLGDERDAILARWNQLQAFWGTGKGYFNSAIPPVEFTQENPFCRFKAVGYSCTP
NNKDEDGLVALVFSKKETDIRSQQQQLVESLHKVLGANQTLTVNVEGVKALPDSQTEVVI
YVVERSPNGTSRKVPATGLFSYLEQSNVKVQLQQLGVILTVARTELSPAQIKQLLQNPPA
GVDPIIWEQAKVDNPDPEKLLPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQ
KNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELN
APTQFKGRLNELMSQIRMQNHFGAVRSEERYSIDADLLQEIKQHLKQQQDGLSHLIGVIK
NDLEDIKLVEQGLNESVHHRGSIFS
NT seq
1520 nt
NT seq
+upstream
nt +downstream
nt
gcttatttggaaacacggctacaacttccagtggatccacaggtttttcatttggcacag
catcaggccttggtcagggatttgggaccaccaccactaccaccacagcacctactggct
ttggatttggcggcactggactgtttggcaacacccaaaacaaaggatttggatttggca
ccggatttagctctgggacgggaactggcctcggggctggtctgggaagcgggtttggag
gatttggcacacagcagcagcaacaacagcagcagcagcaacaaccacccacattagcga
gtctctttgcacagccatcacagcctcctacccagtcgaatcagctgataaacacagcca
atgccctttcagctcccaccctgctgggagacgagcgagatgctatcttagcaagatgga
accagttgcaggccttttggggaacaggcaaaggttatttcaacagcgccattccacctg
tggagttcacacaggaaaaccctttctgcaggtttaaggctgtaggttacagttgtacac
ccaacaacaaagacgaggatggcctggtggctctggtgttcagtaagaaagagactgaca
tccgaagccagcagcagcagctagtggaatcgctacataaagtcctgggggcaaaccaga
ctctcactgtcaacgtggagggggtgaaagcattgccagattcccagaccgaagtggtca
tttatgtggttgaacgctctcccaacggcacatcgagaaaagtcccagccacaggcctgt
tcagctacctggagcagagcaatgtgaaggttcagttacagcagcttggggtgatcttga
cggtggccaggacagagctctcaccagctcagatcaagcagcttctccagaaccctccag
ctggtgttgatccaattatctgggagcaggccaaagtagacaaccctgatccagaaaagc
tccttccagtgcctatggtaggttttaaggaactacttagaagactaaaggttcaggacc
aaatgacaaagcaacaccagaccagattagatataatatcggaagacatcagcgaactac
aaaagaaccaggccacaacagtggcaaaaatagctcagtacaagaggaaactaatggatc
tgtcccaccgcgtgttgcaggttttaattaaacaggagatccagagaaagagtgggtatg
ccattcaggcagatgaagagcagctccgggtgcagctggacacaatccagtgtgaactca
atgcaccaacgcagttcaaaggccgtctgaatgaactcatgtcccagataaggatgcaga
atcattttggtgctgtccgttctgaagagaggtacagcatagatgcagatctcttacagg
aaatcaagcagcacttaaagcagcagcaggatggactgagccatttgattggggttatca
aaaatgacctggaagatattaaactggttgaacaggggctgaatgagagcgtgcatcaca
gaggcagcatcttcagctga
DBGET
integrated database retrieval system