KEGG   Latimeria chalumnae (coelacanth): 102367202
Entry
102367202         CDS       T02913                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin 54
  KO
K14308  nuclear pore complex protein Nup54
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102367202 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102367202 (NUP54)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102367202 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 102367202
NCBI-ProteinID: XP_014354034
Ensembl: ENSLACG00000004827
LinkDB
Position
Un
AA seq 505 aa
LFGNTATTSSGSTGFSFGTASGLGQGFGTTTTTTTAPTGFGFGGTGLFGNTQNKGFGFGT
GFSSGTGTGLGAGLGSGFGGFGTQQQQQQQQQQQPPTLASLFAQPSQPPTQSNQLINTAN
ALSAPTLLGDERDAILARWNQLQAFWGTGKGYFNSAIPPVEFTQENPFCRFKAVGYSCTP
NNKDEDGLVALVFSKKETDIRSQQQQLVESLHKVLGANQTLTVNVEGVKALPDSQTEVVI
YVVERSPNGTSRKVPATGLFSYLEQSNVKVQLQQLGVILTVARTELSPAQIKQLLQNPPA
GVDPIIWEQAKVDNPDPEKLLPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQ
KNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELN
APTQFKGRLNELMSQIRMQNHFGAVRSEERYSIDADLLQEIKQHLKQQQDGLSHLIGVIK
NDLEDIKLVEQGLNESVHHRGSIFS
NT seq 1520 nt   +upstreamnt  +downstreamnt
gcttatttggaaacacggctacaacttccagtggatccacaggtttttcatttggcacag
catcaggccttggtcagggatttgggaccaccaccactaccaccacagcacctactggct
ttggatttggcggcactggactgtttggcaacacccaaaacaaaggatttggatttggca
ccggatttagctctgggacgggaactggcctcggggctggtctgggaagcgggtttggag
gatttggcacacagcagcagcaacaacagcagcagcagcaacaaccacccacattagcga
gtctctttgcacagccatcacagcctcctacccagtcgaatcagctgataaacacagcca
atgccctttcagctcccaccctgctgggagacgagcgagatgctatcttagcaagatgga
accagttgcaggccttttggggaacaggcaaaggttatttcaacagcgccattccacctg
tggagttcacacaggaaaaccctttctgcaggtttaaggctgtaggttacagttgtacac
ccaacaacaaagacgaggatggcctggtggctctggtgttcagtaagaaagagactgaca
tccgaagccagcagcagcagctagtggaatcgctacataaagtcctgggggcaaaccaga
ctctcactgtcaacgtggagggggtgaaagcattgccagattcccagaccgaagtggtca
tttatgtggttgaacgctctcccaacggcacatcgagaaaagtcccagccacaggcctgt
tcagctacctggagcagagcaatgtgaaggttcagttacagcagcttggggtgatcttga
cggtggccaggacagagctctcaccagctcagatcaagcagcttctccagaaccctccag
ctggtgttgatccaattatctgggagcaggccaaagtagacaaccctgatccagaaaagc
tccttccagtgcctatggtaggttttaaggaactacttagaagactaaaggttcaggacc
aaatgacaaagcaacaccagaccagattagatataatatcggaagacatcagcgaactac
aaaagaaccaggccacaacagtggcaaaaatagctcagtacaagaggaaactaatggatc
tgtcccaccgcgtgttgcaggttttaattaaacaggagatccagagaaagagtgggtatg
ccattcaggcagatgaagagcagctccgggtgcagctggacacaatccagtgtgaactca
atgcaccaacgcagttcaaaggccgtctgaatgaactcatgtcccagataaggatgcaga
atcattttggtgctgtccgttctgaagagaggtacagcatagatgcagatctcttacagg
aaatcaagcagcacttaaagcagcagcaggatggactgagccatttgattggggttatca
aaaatgacctggaagatattaaactggttgaacaggggctgaatgagagcgtgcatcaca
gaggcagcatcttcagctga

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