Latimeria chalumnae (coelacanth): 102367310
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Entry
102367310 CDS
T02913
Symbol
SYDE2
Name
(RefSeq) synapse defective Rho GTPase homolog 2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102367310 (SYDE2)
Membrane trafficking [BR:
lcm04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
102367310 (SYDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
102367310
NCBI-ProteinID:
XP_005993935
LinkDB
All DBs
Position
Un
AA seq
1707 aa
AA seq
DB search
MADPLRRTLSKLRGKKTKRGSAAAARGMGVGTTNGGNPQGKETAWREARGVSGERVPEGL
LGWSGNPKVGKRNGVVDFADVASECVRAQQVNKVQQQQAERLPRETAALMGARVNEEPPG
VGFEVAPETMTEWKREEESPSVPEQKPTLRGSRSAMEVQPSVPVQHCGGSAVLGLFENSE
LKRKKTFSDSGAPLANALTLLPNNILHADANHKAQMPINGVDVASGLNYNSGDVEELMGK
NVTDFELSFKPDLVQQVGLNGAHMYCVQGQYPCMQLETEHVWENKCIDPQSIHGSGLYFK
GFANVNVLNPGPLASSLTSSLCRPVYQAYGSLDQTLKEATQRHNSVDSEDDDYYDNENLP
CYEQTEVKGSHLKHFHILGDTAVLNTNVDCGFSQMCEIRSSNSLRKGSVDSAQETDRLRT
QLKEAYYLLIHAMHDMPVDHQTGCGGFADRKISSSHSQDSVYTQSSVRIVDSDVWSCSET
SPQQGSDADSFLVKYLENCELPKKVTSSKSVDNLVCLTKPSLQRSLSDSVMIYSSVRSCS
HLDSNLKRKQSYKSSTDQKCEDEMYNQAEEYTGDVHSMCCEAPEWSSVKQPYENGAILNE
SRGNVNNFRNLAENVVTIYREDAVDDSQVCPFKTPGVTVNKMQEWMHKGRMLSLEMKERI
SGSSLKVTWTSGSLSGHVNSKDISKSTSIPFVKVQDNKTAQSSTAQPVLLTGRQIAMTIS
FWAFSSVIFYMSNVIENVHCVSINRKDLKVSENNEVNEPRQHINNITVSKKRNWLQQSSM
KSQFPEENSTVQTVNVGDSTYLSNLSSPLNELKRQVQTQVKTTVGHGNPKKTSDGYDISV
KFVHTNSTCTRDISPTNGGGCLLDPSEEHDADDEGEIWYNPIPEDDEPSFPQALCPSRVR
SGKSDSPGTSCKRKLSAADLTKAAGHAGGPLNSSESGGDIQVAPASDVNHINSIHSTERV
QLHRQMFACKPQNGLAVEESCVHRLSAAAYGIHSTNEVDCVTTGFSPPSSPNPMKKGGSI
NWSFPDKIKSPRTVRKLSMKMKKLPELSRKLSVKGSLSHNGSDNQSSFHKSSSQDSSHET
SLSPSGNTTATASRNVISRYHLDSSVSSQHSDYKKKSMGSSKSASKGGYLSDGDSPELVT
KSGKHCSENKAGKGKENTSNNNHKPHGTEIDIDAFRHYSFADQPKCSQYISGLMSVHFYG
AKDLKPPRMDSREVFCAIQVDSVNKARTALLTCRTTFLDMDHTFNIELENAQHLKLVVFS
WEPTPRKNRVCCHGTVVLPTLFRVTKMHQLAVRLEPRGLIYVKLTLMEQWENSLDSPDSD
REPVVFGVEARKVVEKENVGLMVPLLMQKCITEIEKRGCQVIGLYRLCGSAAVKKELRES
FERDSKAVVLSESQYPDINVITGVLKDYLRELPSPLITKQLYEVVLETMAKRPLKMTASG
CENDPGDSEHTVSLLDCLPDVEKATLKMLLDHLKLVASYHEINKMTCQNLAVCFGPVLLS
QRQEAINQANRVFTDSEELASALDFKKHIEVLHYLLQLWPVRNSSTKEATESNPSPEQQV
SSSYLRRKKQRPQILNFADAEMAGVLRPRQARLDSPSSNRYAGDWSSCGESYFLPGKEIH
SEADYDDVPSEDTESEEDNTKTDGPNHVLEPSEPITKEHTYHAYIKMQEINSALDHRVHL
KDLQESIDTLIGNLERELNKNKLNISY
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactctgtcaaaactgcgggggaaaaaaacgaaacgaggg
tcggcggcggcagcccggggaatgggagtcggaacaaccaatggtggcaatccccaaggt
aaagagacggcttggcgagaggctaggggggtgtctggcgagagggtgcccgaggggctg
ctggggtggagtgggaaccctaaagtgggaaagaggaacggggttgtggacttcgcagac
gtcgcgtccgagtgtgtaagagcgcaacaagtaaataaagtacagcagcagcaggcggag
cggctcccccgggagactgcagctctgatgggggctcgagttaatgaggagcccccgggg
gtcggctttgaagtggcaccagagacaatgacagagtggaagcgagaagaagagagtccg
agtgtccctgagcagaagccgacacttcgtggaagccgatcggcaatggaagtgcaaccc
tctgtcccggttcagcattgtggagggtctgctgttttggggctgtttgaaaattcagaa
cttaagagaaaaaagacgttttcggatagcggtgctcccttggcaaatgccttaactctg
ctacccaacaatattttgcacgcggatgcaaatcacaaagcccagatgccaataaacgga
gtagatgtggcatcaggacttaattacaattcaggtgatgtagaagagcttatgggcaaa
aacgtaactgactttgaacttagttttaagccggaccttgtgcaacaggtggggctaaac
ggtgcacacatgtactgtgtgcaaggtcaatatccatgtatgcaactcgagacggagcac
gtttgggaaaacaaatgcatcgatccgcaaagtattcatggaagtgggttatactttaag
ggttttgcaaatgttaatgtgttgaatcctggacctttagcctccagtttaaccagttct
ttatgcagacctgtataccaagcgtatggtagtttagatcaaaccttaaaggaagccaca
cagcgccataattcagttgatagcgaagatgatgactattatgacaatgaaaatcttcct
tgttatgagcaaactgaagtcaaaggttctcaccttaaacattttcatatacttggagac
actgcagtccttaacactaatgttgattgtggattttctcaaatgtgtgaaatacgcagt
agcaatagccttagaaaaggtagtgttgacagtgcccaggagacagatcggttaaggaca
cagttaaaagaagcttattatttgctaattcatgctatgcatgatatgcctgttgatcat
caaacaggttgtggtggctttgcagataggaagatttctagctcccattcccaggatagt
gtttacactcagtcatctgttaggattgtagatagtgatgtttggtcctgtagtgaaacc
agcccacagcagggttctgatgcggattcttttcttgttaaatatttggaaaactgtgaa
ctgcctaaaaaagtaacttccagtaaaagtgttgacaatttggtatgtcttacaaaacct
tcattgcaaaggtcacttagcgatagtgtgatgatctattccagtgtaagatcatgtagt
caccttgacagtaacttgaaaaggaaacagtcttacaaaagttcaacagatcaaaaatgt
gaagatgaaatgtataaccaagctgaagaatatactggagacgttcattcaatgtgctgt
gaagctccggaatggagcagtgtgaagcagccatatgaaaacggcgcaatattgaatgag
agtaggggtaatgtgaacaatttcaggaatttggctgagaatgtggtgaccatttatagg
gaagatgctgttgatgatagccaggtgtgccccttcaagacacctggagtcacagtaaat
aaaatgcaggaatggatgcacaaaggacggatgctttctttggaaatgaaggaacgtata
agtgggtcatctctaaaagtcacttggacttctggttcactttcgggtcatgtaaatagt
aaagatatttcaaagtctacttcaattccctttgtgaaggtacaagacaacaaaacagca
cagtcatctacagcccaaccagttctgctgacaggtaggcaaattgccatgacaatctct
ttttgggccttcagctctgtcatcttctacatgtccaatgtcattgaaaatgtccactgc
gtctctataaacagaaaagacctgaaagttagtgagaacaatgaagtaaatgagcctagg
caacatattaacaatattacagtgtcgaaaaaacgtaactggttacagcagagctctatg
aagtcccagtttcctgaagaaaatagcactgtccaaacagtaaatgtgggagatagcacc
tatttatctaatctatccagtcctttaaatgagctcaaaaggcaggtgcaaacacaggtg
aaaacaactgttggacatggtaatcccaaaaagacttctgatggatatgatatttctgtt
aaatttgtgcacacgaacagtacatgtacgagagatattagccctacaaatgggggtggc
tgtttgttggaccccagtgaagaacatgatgctgacgatgaaggagaaatttggtataat
cccataccggaagatgacgagcccagctttccccaagccctgtgtccttccagggttcgt
tctggtaaatctgactctccaggcacgagctgtaagagaaaactgtctgctgcagaccta
actaaagcagcagggcacgcaggaggccctttaaattcctcagaaagtggtggggacatc
caggtagctccagcaagtgatgttaatcatataaattccatacattccacagagcgtgtg
cagctgcacaggcagatgtttgcgtgcaaacctcaaaatgggctggctgtggaggagagc
tgtgtacacagattatcagctgcagcttatgggatccattctacaaatgaagttgactgt
gtaacaacaggcttttctccaccttccagtcccaaccctatgaaaaaaggaggctcaatt
aactggtccttcccagataaaataaaatcacccagaacagtgagaaaactatccatgaaa
atgaagaaattgcctgaacttagccgaaagttaagtgtcaaaggatccttaagccataat
ggttcagataatcaatcttcatttcacaaaagcagcagtcaagattcaagccatgaaact
tctttatctccatctgggaacacaactgctactgccagtcgaaatgttataagccgctac
catttggacagtagtgtgtcatctcagcacagtgattataagaaaaaaagcatgggaagc
tccaagtccgccagcaagggtgggtacctcagtgatggggactccccagaacttgtaaca
aaatcagggaagcattgttctgaaaataaagctggaaaaggaaaggagaacacttcaaat
aataatcataaaccccatggaactgaaatagacatcgatgctttcagacactacagcttt
gctgaccagcccaaatgttctcagtacatttcaggactcatgagtgttcacttctatggg
gctaaagatctgaaaccaccgagaatggactccagggaagtattctgtgccattcaggta
gactctgtcaacaaagccagaacagctttgcttacttgtaggacaacatttttagatatg
gatcatacttttaacattgaacttgagaatgcccagcatctgaagttggtggtgttcagc
tgggagcctactccacgcaagaatcgtgtttgttgccatggaactgttgtgctgcccacc
cttttcagagttacaaagatgcatcaattggctgtcagattggagcctcgggggcttatt
tatgtaaagctgaccctgatggaacagtgggagaactccctggatagtccagattccgat
cgggagccagtagtatttggagtggaggctcggaaagttgttgagaaagaaaatgttggc
ttgatggtaccattattgatgcagaaatgcatcactgagattgagaaaagaggctgtcag
gttattggcttataccgtctttgtggttcagcagcagttaagaaagagcttcgagagtca
tttgagcgagacagcaaagctgttgttctgtctgaaagccagtatcctgatattaatgtt
ataacaggtgttctcaaggattatttaagagagctgccctccccgctgataacaaagcag
ctgtatgaagttgtgctggaaaccatggctaaaaggcctttaaagatgactgccagtggc
tgtgagaatgaccctggtgattctgagcacactgttagtcttctggactgcctgccagat
gtcgagaaggcaaccttaaagatgcttttggatcatctgaaattggtggcttcgtatcat
gaaataaataagatgacctgccagaacctagcagtgtgttttgggcctgtgttgctgagc
cagagacaggaggctatcaaccaagctaacagagtctttactgactcagaagagcttgct
agtgctttggacttcaagaaacatattgaggtcctacattatctactccagctgtggcca
gtgcgcaattcaagtaccaaagaagcaacagaaagtaatccatctccagagcagcaggta
tcttcgagttatcttagaagaaagaaacaacgaccccaaatattgaactttgcggatgct
gagatggcaggggtgctgaggcctagacaggctaggctggatagcccttctagcaatcga
tatgcaggggactggagtagttgtggagagagttattttctgcctggaaaagagattcat
agtgaagcagactatgacgatgtcccttcagaagacactgaaagtgaagaagataacaca
aaaactgatggaccaaatcacgttttagaaccttcggaacctataaccaaagagcatact
tatcatgcctacataaaaatgcaggaaattaattcagcactggaccacagagtacacctc
aaagatctgcaagagagcattgacactctgattggcaacttagagcgtgaactgaacaaa
aataaattaaatattagttattaa
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integrated database retrieval system
