KEGG   Latimeria chalumnae (coelacanth): 102367329
Entry
102367329         CDS       T02913                                 
Symbol
HELQ
Name
(RefSeq) helicase, POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102367329 (HELQ)
Enzymes [BR:lcm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102367329 (HELQ)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    102367329 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 Cdd1 DNA_pol_lambd_f BacteriocIIc_cy
Other DBs
NCBI-GeneID: 102367329
NCBI-ProteinID: XP_005999426
Ensembl: ENSLACG00000010835
LinkDB
Position
Un
AA seq 1096 aa
MTDMMRMSKSSNITDSEVIKVKRASFRKRSQRGHSNMTPVKKRLNDNITSEDGLYQPTDK
PREKNATNFTQAMTASHDTEQFTNDSEEDLFGDYDSFAEDNTFVDGLNNLEKKFTLHCNN
LRSLTAEQENIVMNDSVVTISKLHQDCEDDLTTLKVPETNNFTQISDKELFKTQQFAQDD
IIEDPPCSQFLVKEEENKPFEPEKTDNSINVEIKCNPQSSLNMYSLQEDNKHVDIRDLSA
PKDTDCESSRRKSLKDQIKSVMARNAKVHIPQISRTKQLKEAVVSEEINVAIQTIENSSD
TDIGPFYGLPTKVKDLIHEFRGIKELYEWQHTCLTLESVQQRKNLIYSLPTSGGKTLVAE
ILILRELLCRQKDALLILPYIAIVQEKARNLSSFGVELNFSVEEYAGSKGKFPPLKRRKN
NSLYIATIEKSHSLVNSLIETERISNLGLVVVDELHMLGEGSRGTILEMTLAKTIYASKA
TQIIGMSATLNNVEDLQRFLTAEHFSSDFRPVVLKEYVKICDCIYEVDSKEEECFKFSRL
LNFKYSSNMLKMDPDHIIALVTEVIPQYSCLVFCPTKKNCENVAEMICKYLNKTFNRHWE
KEKEALLTELKDAGGGSICPILRQTIPYGIAYHHSGLTSDERRLIEDAYSAGVLCLLTCT
STLAAGVNLPARRVILRSPYVARDFLKRSQYKQMIGRAGRTGIDTAGESILILQQKDKHL
VQDLVSRPLENCYSSLLHDCGKGLQGLLLSLIGLKIANTPQDIHQFMLETLFSVQQKQLS
EGKSIWDITRDALALLIGKGLVKDKIISENEHQEKRHFLEVTKLGQATYKGSIDLAYCDL
LYKDLKKGMEGLILDSYLHLIYLVTPYDMISPCSPDWMIYFIQFNHLSPVDQKVADIVGV
PESFIVKKASGQCVKKGIDNSVVNRFYLSLVLYSLFKDPNIWTVADKFNLSRGFVQNLLS
SSAAFASCTLHFCEELEEFWPYRALLTELIKRLTYCVKAELVPLMEVPGVLTARARQLHS
AGYKTLAHLANVDPEVLMKMIERMSRRQAKQIVASAKMLLSEKAEALQEEVDELLKLPSD
LPVLAAIPTENSLIPD
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgacagatatgatgcggatgtcaaagagctccaatataactgacagcgaagttataaaa
gtgaagagagcctcctttcgtaagaggtcgcagcgtggtcacagcaatatgaccccagtt
aagaaaaggctaaatgacaacatcaccagcgaggatggactttatcagcccactgacaaa
cctagagagaaaaacgcaacaaacttcactcaagccatgactgccagtcatgacactgag
cagtttacaaatgacagtgaggaagacctctttggggattatgacagctttgctgaggat
aatacttttgtagacggactgaataatctagaaaagaaattcacattgcactgcaacaac
ttaaggtcacttactgcagaacaagaaaatattgtcatgaatgattcagtagttacaatt
tccaaactgcaccaagattgcgaagatgaccttactacattaaaagtgcctgaaactaac
aatttcactcagattagtgacaaagagcttttcaagactcaacagtttgcacaggatgac
attatagaagatcctccttgttcccaatttttagtaaaggaagaagagaataaaccattt
gagccggaaaagacggacaactctataaatgtagaaatcaagtgcaatccacaaagctct
ttgaatatgtactctcttcaggaagacaataagcatgttgatatacgtgatctttctgca
ccaaaggatacagactgtgagtccagtagaagaaagagtttgaaagatcagatcaaaagt
gtaatggctagaaatgccaaggttcacattccacagatttccaggactaagcagctcaag
gaggctgttgtatctgaggagataaacgttgcaatacagactattgaaaatagttcagac
actgacattggtccattctatggtttacctaccaaagtgaaagatctgattcatgagttt
cgtggaattaaagaattgtatgagtggcagcatacctgtttaacactagaatcggtacag
caaagaaaaaatctgatctattctttgcctacaagtggtggaaagacactggtagcagaa
atcttgatccttcgagaactgctatgcaggcagaaggatgcactgctgatcttaccatat
atagctattgtccaggaaaaggctcgcaatctgtcaagttttggtgtggagctgaatttc
tctgtcgaagagtatgctggaagtaaaggaaagttccccccactgaaaagaaggaaaaat
aattctttatacattgctactattgagaagagccacagcttggtcaattccttgatagaa
accgaaagaataagcaacttgggcctcgttgtggtcgatgaattacacatgcttggtgaa
gggagccgaggcaccattctggagatgactctggctaaaaccatttatgctagcaaagct
acacaaattattggaatgagtgcaactttaaacaatgttgaagatctgcagcggttcctt
acagctgaacacttctctagtgattttcgacctgttgttctaaaagaatatgttaaaatc
tgtgactgcatttatgaagttgacagtaaagaagaagaatgctttaagttctctcgtctc
cttaatttcaagtattccagcaatatgttgaagatggatccagaccatataatagctctg
gtaactgaagtcataccacagtattcctgtttggttttctgtcccaccaagaaaaactgt
gaaaatgtagctgaaatgatttgcaaatacctgaacaagacttttaatcgacattgggaa
aaagaaaaggaggctcttcttactgaactaaaggatgccggtggtggaagcatctgtccc
attttgagacaaactattccatatggtattgcctatcaccacagtggccttaccagcgat
gaaaggaggttgattgaagatgcatattctgctggtgtcctatgccttcttacctgcaca
tcaactctagctgctggagtcaatttgccagctcgcagggttattctccgatctccctac
gttgccagggatttcctaaaaaggagtcaatacaaacagatgattggacgagctggacgt
actggcatcgatactgctggagagagcattctcatactgcagcaaaaggacaagcacttg
gttcaagacttagtaagtagacccttggagaactgctacagctctctcctgcatgactgt
ggcaagggacttcaaggccttctcctctccttaattgggttaaagattgcaaatacccca
caagacattcatcagttcatgttagaaacactatttagtgtgcagcagaaacagctttct
gagggaaaaagtatttgggatataacaagagatgcactggcgctcctaattggaaaaggc
ttggtcaaggataaaatcatcagtgaaaatgaacaccaagaaaaacgccactttctagag
gttacaaagctgggtcaagccacttataaaggatccatagacttagcttattgtgacttg
ctgtataaagacttaaaaaaaggaatggaaggcttgatccttgatagctaccttcatctg
atctacttagttaccccctatgatatgatttctccgtgtagcccagactggatgatatat
ttcatacagtttaatcatctgagcccagttgatcagaaagttgctgatattgttggagta
ccagaaagttttattgtaaaaaaggcttcgggtcaatgtgtcaaaaagggtattgataac
agtgttgtgaacagattctacctttcccttgtgctatactccctttttaaggatcccaat
atatggactgtagcggataagtttaacctgtctcgtgggtttgtacaaaatttgctcagt
tcctcagctgcatttgcctcctgtacactccatttctgtgaggagttggaggaattctgg
ccttacagagctcttcttactgaactgatcaagagactaacttactgtgtgaaagcagag
cttgtaccattgatggaggtgccaggagttctaacggctcgagccagacagttgcacagt
gcaggatataaaacgctggcacatcttgccaatgtggatccagaagtattaatgaagatg
attgaacgtatgtctcgtcgacaagctaaacagattgtggcttctgctaagatgctgctc
agtgaaaaagctgaagccttacaagaggaggtggatgagcttttaaagctaccgtcagac
ctcccagtgctggccgcaattccaacagagaatagtctgatccctgattaa

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