Latimeria chalumnae (coelacanth): 102367335
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Entry
102367335 CDS
T02913
Symbol
CNTN1
Name
(RefSeq) contactin 1
KO
K06759
contactin 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102367335 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102367335 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcm00537
]
102367335 (CNTN1)
Cell adhesion molecules [BR:
lcm04515
]
Immunoglobulin superfamily
Contactins
102367335 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcm00537
]
Others
102367335 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Ig_4
C2-set_2
Motif
Other DBs
NCBI-GeneID:
102367335
NCBI-ProteinID:
XP_006001454
Ensembl:
ENSLACG00000003625
UniProt:
H3A353
LinkDB
All DBs
Position
Un
AA seq
1009 aa
AA seq
DB search
MYLLITQLFMLAFIFCLAEEGRRYGPVFEEQPIDTIYPEESPEGRVSMNCRARGNPSVVY
KWKLNSWDINLDNDHYSMVGGNLMITNPEKHKDAGKYICIATNEYGTIVSKEATLSFGYL
DPFSTDERFAVEIKEGIGAVLLCEAPYHYPDDLTYRWLYNEFPTFIHPDRRRFVSQTTGN
LYIAKVESTDIGNYSCFVSSPSVTKSVFSKSISFIPQPEGSVKRYPADIKVRFKDTYATV
GQNVTLECFALGNPVPEISWQKVSEQLPSSAEVSTSGAILNIFNIQPEDEGTYECKAENS
KGRDTHRSRVYVQAYPEWIKQINDTQRDIGSTLTWPCEAKGNPVPSIRWQKNGQAFRRGE
LKINSLSLEDAGMYQCIAENSLGSIYANAELKVLALAPTFESSPVKKKLLAAKGGRLIVH
CKPKAAPKPRFFWSKGTEMLTNSSRMSVWRDGTLEILNVTKMDEGSYTCVAENKRGKANS
TGTLSITDATKITLAPSNADVTVGENATMQCHASHDSTLDLTFIWSVNGYVINYDKEKDH
YERNLMSEAGSELIIKDVHLRHAGRYTCTAQTIVDNATASADLVVRGPPGPPGGVRVEDI
KDTSVTLTWSRGTDNHSPISKYIIQAKNILSEDWKDVKTDPSNIEGNMETAKVTDLIPWM
DYEFRVIATNTLGTGDPSLPSRSIKTLEAAPTVAPSDIGGGGGSNRELTITWTPLSREYF
NGNDFGYVVAFKPYGEKEWKKVTVPGSDVDRYVHKDDTMPPSTQFLVKVKAYNNKGEGPF
SLTAVIFSAQDAPNEAPRRVWTETLSSSEVRVFWEPVYQQSLEGYWVRYWRVQDKEAAAQ
RVMVGNHENSTKLENMLPNSHYHIEVRAHNSAGYGPASTLIDVTTEKAPPSRAPKSLSAS
RSGSEYTITWEHVEPLANESDVKGYKVLYRPEGQPTGKLYKTGEHHIVVPVPQTGEYVVE
VRAHSAGGDGAVSEIRIKGASAGTVSVQGFASFISLLLPILSAIGSLKL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcttgattactcagcttttcatgcttgctttcattttttgtttggcagaggaa
ggaagaagatatggaccagtatttgaagaacagcccattgatacaatataccctgaagaa
tctcccgaaggaagagtttcaatgaattgcagggcccgtggaaacccatcagttgtttac
aagtggaagttaaatagctgggacatcaacctggacaatgatcactacagtatggttggt
ggaaaccttatgatcactaatccagagaagcacaaagatgctggaaaatacatctgcata
gcaacgaatgaatatggaactattgttagcaaagaagccactctcagctttggatatctt
gatccattttcaacagatgagcgctttgcagtggaaataaaggaaggcattggagcagtg
cttttatgtgaagctccttatcattacccagatgaccttacatatcggtggctttacaat
gagtttccaacatttatccacccggacagacggagatttgtttctcaaaccactggcaat
ctgtacattgctaaagtggagtcaacagacataggcaattattcctgctttgtgtcaagt
ccttcagttacaaagagtgtcttcagcaaatccatttcttttattcctcagccagaaggt
tctgtgaaaaggtatccagctgatataaaggttcgctttaaagatacctatgcaacagtg
ggacaaaatgtaacacttgagtgttttgcccttggcaaccctgttccagaaatcagttgg
cagaaagtttctgagcagttgccaagcagtgctgaagtaagcacgtctggcgcaattctt
aacatttttaatattcagcctgaagatgaaggaacatatgagtgtaaagctgaaaactca
aaggggagagacacacatcggagtagagtttatgtccaagcttatcctgagtggataaag
cagatcaatgatacgcagagagatattggaagcactctaacttggccttgtgaagcgaaa
ggaaaccctgtcccttccatcagatggcagaaaaatggacaggcttttcgtcgaggtgaa
ctgaaaattaattcattgtctttggaggatgctgggatgtatcagtgcatagcggaaaat
tccctgggatctatttatgcaaatgctgagctgaaagttctggctttagccccaaccttt
gaatcgagtcctgtgaaaaagaagctgttggctgctaaaggaggaagattgattgttcat
tgcaaacctaaagctgcaccaaaaccaagattcttctggagtaaaggaaccgaaatgctt
acaaacagcagcaggatgtctgtctggagagacggcactctggaaattctaaatgtcaca
aaaatggatgagggaagttatacctgtgtggcagagaataaaagaggaaaagcaaacagc
actgggacactttctatcacagatgccacaaagattacccttgctccatcaaatgctgat
gtcacagtgggagaaaatgcaactatgcagtgccatgcatcgcatgattccacgctggac
cttacttttatctggtctgtgaatggatatgtaattaattatgacaaagagaaggaccac
tatgagcgtaatctaatgagtgaagctggtagtgaactgattattaaagatgtacacctg
agacatgctgggaggtatacatgcactgcacagactattgtagataatgctacagcttca
gcagaccttgttgtcagagggcctccaggccctcctggtggtgtacgagtagaagatatt
aaagatacatctgttactttgacttggagtcgtggtactgacaaccatagccccatatcc
aaatacattatccaggcgaagaacatcttgtctgaggattggaaagatgtgaaaacagat
cctagcaatattgagggaaacatggagacagctaaggtcactgatttaataccatggatg
gattatgaatttcgtgtcatagcaacaaataccttagggacaggagatccaagtctccca
tctcgcagcattaagaccctggaagctgctcctactgtggctccatcagatattggagga
ggaggtggaagcaaccgggaactaacaataacatggacgcctttgtcaagagagtatttc
aatggcaatgactttggctatgtagttgctttcaagccatatggagaaaaggaatggaaa
aaagtgactgtgcccggctctgatgttgatagatatgtacacaaagatgatactatgcct
ccttctacgcaatttctagtgaaagttaaggcctacaacaacaagggagagggaccattt
agcctcactgcagtcatcttttcagcacaagatgcgccaaatgaagctccgagaagggta
tggacagagaccttgtcatcttctgaagttcgggtattctgggagcctgtttaccagcag
tcacttgaaggatattgggtacggtattggagggtgcaagacaaagaagctgccgcacaa
agggtgatggtgggcaatcatgaaaattctaccaagctggagaacatgttacctaattca
cattaccacatagaagtaagggctcacaattcagcaggatatggacctgccagtactctt
attgatgttaccacagaaaaagcacctcccagccgtgcaccaaagagcctcagtgcatct
agatcaggctcagagtataccatcacatgggaacatgttgaaccactcgctaatgaatct
gatgtgaaaggatacaaggtactctatcggccagaaggtcaacctacagggaagttgtat
aaaactggtgaacatcatatagtagttccagttccacaaactggagaatatgttgttgaa
gttcgagcacacagtgcaggaggagatggagcagtgtctgaaatccgaatcaaaggcgct
tctgcaggaacagtctctgtgcagggctttgccagcttcatctctctgctgttgcctatt
ctgagtgccattggtagcctaaagctgtga
DBGET
integrated database retrieval system
