Latimeria chalumnae (coelacanth): 102367631
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Entry
102367631 CDS
T02913
Symbol
SEC16A
Name
(RefSeq) SEC16 homolog A, endoplasmic reticulum export factor
KO
K20353
COPII coat assembly protein SEC16
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102367631 (SEC16A)
Membrane trafficking [BR:
lcm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102367631 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
102367631
NCBI-ProteinID:
XP_014346202
Ensembl:
ENSLACG00000017905
LinkDB
All DBs
Position
Un
AA seq
2504 aa
AA seq
DB search
MQPPPQTLPPGAGGPPPTGGTSNMYRRNSPYNRRVNAPMAGVAAAVQPVMDPFAFGRQTP
QGTPLGNPLLMHGPVSVFPLPQQFQVQANVAQGMEKSHSGQALSPVPPNAAQPGVNMFTP
NITTLSPLPGSFSNSNTTATRDSEPVPKTSSENPYPNAGPALQNSIAGLSQGTAPPQIGL
PSSQVITRESNVPSYMEPNPLPFPQQQNLSESHWRPAQDSRPSSDQNYFQTTEAQAPSMN
YSILHPPSSQPPHQNQMHQPALQQHQNSIFPPPSSQPAHQNQMHQASAYQQHQNSILLPP
SSRPPHQNVINQTPAHQQHQNTIPQPPHHNRMHQPSTHQQHQNYKQSNFMQDSSLTFTDG
NNGQRNVMEKGAESRTFRTGNQQSMLFYAGPFYNHNVGMTDNWGYQSSQEHFYLQQHTPE
NNHLQNPVAQIEERKNASQAMGETASNHAAVDSDSGTISMFFKGDEVENEETLSSDKTNV
GVSADSFQQSSFFNLQPNLQQQTATNVFFTPMNPPVDVEGIHKGADFKPNLNQMINQQDA
QTSRKPTNNTDGTSSVSETQRKAGTDFENMENLELIQNQEVLPSEKQSVQSTVLYTGSDV
VVSESPAVQGYLSCDTTDNLEGGPNLETPDSIPHPVRSDSVSSNYSNVSHGSASNSRRPQ
GLLGTFIQQETGKPVENASSSFFEQIDSPPLGGDSVEQKVGKNVYHSPLSQPPTPSPPKP
TGIFQTSANSSFELVRSHGVGVKPVEVDQAKMVMELQESGSSKQGSSNLDASPGNLEQPP
DNVENIFVTHAQQSSHTTEGIHENVLQNIGRPVLEIGQQLSDKRPASRTQGVRTKCESPA
TTLWAQNEIPNFGGNILLAPAAPPVHTSTKPTTTEIIQPPEDGPADHSLHLQAVVSQVPA
PDVNVSENLENPPQFGKEQSLQAQASSGYATLLVPSPQTDSLQNQPVLLTQPLQNYTVAS
PVNSPVSVHNLVSQGEINRSLRDPKAGNKSSQAFDFSVSSSSALFPMMHSGSVINSTPSS
LPNVNTTPTTVNSPGVILNQSTNVPPPSNQGPLNLAPEKRENVTSAPFHESFNKPSSQLS
DSGKTIPDGNTSNRLGPHNHNSELINNSVIKPSDQNESFTNLEQLSFTMLYAQTNESMNN
PKPTNQSLLTDASLIPQQPNSAQMYQPELQKNDKPGFYLQVTKDVQRPPSPEVAQKGTQS
VQQEASVCQPQLVLPSQLQEFSLTYSVPPGNEPVQPQMLSQYPVKLSGQEPQGVGSIHQP
TGYGPSEVGPHITPPQLANTNAASTDGNPSVHQDQRPPPSQTPLQMYGPSQQHGMYSYPR
QPYLEYGDGRYPYPHPYPYSEPVTAHPYYQEELYRGYDSRYCEVERYPLAERDRPSRPSS
RASHGSDRPPSRQGYIDDYYNQRGGRSAYEDYYADYYRNQYGDPSRWDRSGPAAYDFGYR
DYRGYDPGYWYNYEREAYRREQFYRDPYANRREGFEEHWRFDPRYDNSFEDEYERRRDPY
SEEFDRRSVHSEHSAHSVHSSHSRRSSFSSRSQQYDFEVVAPPRPITPEKFSIVHVCVRF
SPGGHLIKVLPNLPSEGQPALVELHSLETILQNTQEQEELRSFPGPLVKDETHKVDVINF
AHNKAKMCLRNENLIDKESANLLWELIELLCRQNGTVVGTDIAELLLQEHKSVWLPGKSP
NEANLIDFNNDAINHVEDDFSGSQLSLLTDTFITSSDEIMKYTERFRELLLFGRKKDALE
SAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAAATCCGD
EKWGDWRPHLAMILSNLTSSSDLDIRSISTMGDTLASKGLIDAAHFCYLMAQVGLGVYTK
KTTKLVLIGSNHSFSFLKFAINEAIQRTEAYEYAQSLGNQLCSLPNFQVFKFIYACRLAE
AGLAAQAFHYCEVISKTVLKHPSYYSAVFVGQLIQISSKLRFFDPQLKEKPEQEWYIEPD
WLLRLRQVDGQIREGAIIYSCGRATPQQYASSTPSSELDQASQSDSMGGPQELGNASENL
PMSSLIPNVGQAIQGFQLMPPAPQTILDGPASPPPPPQSVPDGSVPLYSLVPPSQGQMPG
ILASPSHGPISGFEPIVSSSGFGIPYESEQMPMQPVLEYQPVQEPEPQSSNQASPVRQTF
SRERPMDFYDRMAELAPGRRSRSTSQSSVHMGHGRRSRTTSESSIHSIEPERRNSAAMQP
SPPPPAILETTTSNKAPDSKKETKDSSLKKDDRGWLSWLTGKRKKNEAHLPDDKNKSIVW
DEKKKRWVNLDEPEEENKPPPPPPTNFPKVHQTLPSGPVSPPIGAPPVNVFSKKAGTRGR
YVDILNPGGTKTNVSAPAPADLFAPLAPIPIPANLFVPSAVPEEQQPVEGRRAESSPSSE
QTNAAANTQPQFFNPAALPSGSEVPASNTEGSQSGELSRSSSMSSLSREVSQHLNQVPSH
PPPPGGLQGGTVQFYNPSQFAQPPAPTGGQRLGRLGQRKYPALK
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccacctccccagactctacctccaggggctggtggacctcctccaactggaggg
acttcgaatatgtatcgtcgtaatagtccatataacaggcgagtaaacgctccaatggct
ggagtggctgcagcagttcaacctgtgatggatccttttgcttttgggagacagactcca
caaggtacaccattgggtaatcccctactcatgcacggcccagtatcagtatttccacta
ccacagcagtttcaagtgcaggctaatgttgcacaggggatggaaaaatcacatagtggt
caagcactgtcaccagtaccaccaaatgcagcacaaccaggagtaaatatgttcacccca
aatatcacaaccctatcaccattgccaggaagttttagtaatagtaacacaacagccaca
cgtgattcggagcctgtacccaagacctcttcagaaaatccgtaccctaatgctggacca
gcacttcaaaatagtattgctggtttatctcaaggaactgctcctcctcaaattggactt
ccaagcagtcaagttataactagagaatcaaatgtccctagttatatggaacctaatcca
ctgccatttccacagcagcagaatctaagtgaatctcattggaggcctgctcaggatagc
cgaccatcttcagaccagaattactttcagacaactgaggctcaagctccaagtatgaat
tatagcatacttcatcccccttcatctcagccacctcaccagaatcagatgcaccaacct
gcgctccagcagcatcagaatagcatttttccacctccttcatctcagccagctcaccag
aatcaaatgcatcaagcttctgcctatcagcaacatcagaatagcatccttctgcctccc
tcatctcgaccgcctcaccagaatgtgataaatcaaactcctgcccaccagcaacatcag
aataccattcctcagccacctcatcacaatcgaatgcatcaaccttctacccaccagcag
catcagaactacaaacaaagtaacttcatgcaggattcctctttgacatttacagatggt
aacaatggacagcgaaatgtaatggagaaaggtgcagaaagcagaacctttcgaactgga
aaccaacagtctatgcttttttatgcaggaccgttctataatcataatgttggaatgaca
gataattggggttaccagtcctctcaggagcatttctatctacagcagcacacaccggag
aacaaccatcttcagaatcctgttgctcaaatagaagaacgaaaaaatgcatcacaagct
atgggtgaaaccgcaagtaaccatgctgctgtggatagtgactcgggaacaatatctatg
ttcttcaaaggggatgaggttgaaaatgaggaaactctttcatctgacaagacaaatgtt
ggtgtgtctgctgattcatttcagcaaagttctttttttaatctacagcctaatttgcaa
caacagacggcaactaatgtgttttttactcctatgaatccacctgtggacgttgaaggt
attcataaaggggcagactttaagcctaacctaaatcaaatgatcaatcagcaagatgct
caaaccagtaggaaaccaactaataatactgatggtacttctagtgtaagtgagacgcaa
aggaaagcgggaacagattttgaaaatatggagaacttggagcttattcagaaccaggaa
gttctgccaagtgaaaaacaaagcgtccaatctacagttttgtatactggttctgatgta
gttgtatctgagtctccagcagtgcagggatatttaagttgtgatactacagacaactta
gaaggagggccaaacttggaaactcctgattccatccctcatcctgtcagatccgatagt
gtctcctcaaactacagtaacgtaagccatggcagtgcttctaattcaagaagacctcag
gggcttcttggaacctttatacaacaggaaactgggaagcctgttgaaaatgcctctagt
agcttctttgaacaaattgattctcctcctctgggaggggattcggttgaacagaaggta
ggtaagaatgtatatcatagtccattatctcagcctccaactccaagtccccccaaacct
actggaatatttcagacgagtgctaatagttcatttgaactagttcgatctcatggagtt
ggtgttaaacctgttgaagttgaccaagcaaagatggtaatggaactccaagaaagtggc
tcttctaagcaaggaagtagcaatttagatgcctcaccaggcaatcttgaacagcctcct
gacaatgtggaaaatatttttgtgactcatgcacaacagtcttcacatacaacagagggt
atccatgaaaacgttttgcaaaacattggcagacctgtgttggaaattggtcagcaacta
tctgataaaagaccagcttccagaacacagggtgtacgcacaaaatgtgagagtccagca
acaaccctgtgggcacaaaatgaaattcctaactttggaggcaacattcttttagctcct
gctgctcctccagtgcatacatcaactaaaccaactactacagaaattatacagccacca
gaagatggaccagctgatcactcattacatttacaagcagttgtttcacaggtacccgct
cctgatgtaaatgtgtcggaaaatcttgaaaacccaccccaatttggcaaagaacaatct
cttcaagctcaggcaagttcaggctatgcaacacttctagtaccttccccacaaactgat
tctttacaaaatcaaccagtattgcttacccaacctcttcagaattacactgtagcctca
ccagtgaattctcctgtttctgttcataatcttgtaagtcaaggtgaaattaatcggtca
ctcagagatccgaaggctggtaacaaatcaagtcaggcatttgatttcagtgtttccagt
agcagtgcactgtttcctatgatgcacagtgggtctgtaattaactccactccttctagt
ctacctaatgttaatacaacacccacaactgtaaattcacctggagtgatccttaatcag
tctacaaatgtaccacctccttctaatcaaggtccacttaatttggctccggaaaagcga
gagaatgtaacatctgctccttttcatgaatctttcaataaaccatcaagtcagctgtct
gattctggtaaaaccattcctgatggaaatacaagtaatcggctaggtcctcataatcat
aattcagagttgattaataattcagtaattaagcctagtgatcagaatgaatccttcact
aatttagaacaacttagcttcacaatgttgtatgcgcaaaccaatgaaagtatgaataat
cctaaaccaacaaatcagtcgctacttactgatgcatcactaattccacaacagccaaat
tctgcccagatgtaccagcctgaattacaaaaaaatgataaaccaggtttttatctacag
gtaaccaaagatgttcagcgaccaccttcaccagaagtcgcacaaaaaggaactcagtct
gttcaacaggaagcctctgtttgtcaaccacaactggttctacctagtcaactgcaggag
ttttctctcacttattcagtgcctccaggcaatgaaccagttcaaccgcaaatgctcagt
cagtatcctgtaaaactatctgggcaagagccacaaggagtgggatccatccatcagcca
acaggctatggtccctctgaagtgggaccacatataactccacctcaacttgcgaatacc
aatgctgcatcaactgatgggaatccttctgtacaccaggatcaaaggccacctccttct
caaacccctctccaaatgtatggaccatcccaacaacatgggatgtacagctaccctagg
cagccataccttgaatatggagatggaagatatccatatccgcacccttacccctactct
gaaccggtaacagctcacccgtattatcaggaggagctgtatagaggctatgattcacga
tattgtgaagttgaaagatatccgttggctgagagagatcgtcccagtcgtccaagttct
agagcaagtcacggttcagatagacctccgtctcgacagggatatattgatgactattac
aaccaaagaggtggaagaagtgcctatgaagattactatgcagattattacagaaatcaa
tatggagatccaagccgatgggatcgatctggtccagctgcctatgacttcggatataga
gattacagaggctatgaccctggatactggtataattacgaaagagaagcgtatagaaga
gagcagttttatagagacccatatgccaataggcgagagggtttcgaagaacattggcgg
tttgatccccgatatgacaatagttttgaggatgaatatgagcgtcgcagagacccatac
agtgaagagtttgatagacgcagtgtacatagtgagcattccgcccacagtgtacatagt
tcccacagcaggcgaagcagtttcagttctcgatctcagcagtatgactttgaagttgta
gctccaccgagacccatcactcctgagaagttttctattgttcacgtgtgtgtgaggttc
agtcctggtggtcatcttattaaagtgctaccaaacttgccttcggaaggacaacctgct
ttggttgagttgcatagcttagagactatactacagaatacacaagaacaggaagaactg
agatccttcccaggacctcttgttaaggatgaaacccataaagtagatgttatcaatttt
gctcataataaggccaagatgtgtctccggaatgaaaatctaattgacaaggagtcggcc
aacctgctatgggagcttattgagctgttgtgcagacagaatgggactgtggttggcacc
gatatagctgagcttttattgcaagagcacaaatctgtgtggcttcctggaaaatctcca
aatgaggcaaatttgattgactttaacaatgatgcaataaatcacgtggaggatgatttt
agtggctcccagctgtccttgctgacggacacattcatcaccagttccgatgagattatg
aaatatacagagcgatttcgagagctgctgctttttggacgcaaaaaggatgctttggaa
tccgcaatgaagcatggtttatggggtcatgctttgctgttagccagtaaaatggacagt
cggacccatgctagagttatgaccaggtttgctaacagtctacccatcaatgatcctctg
caaacagtgtaccagctgatgtcaggaagaatgccagctgcagccacatgttgtggagat
gagaagtggggagactggagacctcaccttgctatgattctgtctaatctaacgagcagt
tctgacctggatataagatcaattagtaccatgggagacacgcttgcctcaaagggtctc
attgatgctgcccatttctgttacctgatggcccaggttgggcttggtgtttatacaaag
aaaacaactaaacttgttctcattgggtcaaatcacagtttttcttttttgaagtttgct
atcaatgaagcaattcaaagaacggaggcctatgaatatgctcaatcactgggcaatcag
ctatgctccttaccaaatttccaggtgttcaaatttatttatgcctgccgcttggctgaa
gcgggactcgctgcgcaggcttttcattattgtgaagtcatttccaaaactgttcttaaa
catccatcctattattcagcagtgtttgttggccagctgattcagatatcctctaagctg
cgattctttgatcctcaattgaaggagaagccagaacaggagtggtatattgaaccagac
tggctgctacgcctgcgtcaggtggatggacaaataagggagggagccataatttatagc
tgtggcagagccacacctcagcagtatgcttctagtacacccagctccgagttggatcaa
gccagtcaatccgatagtatgggcggcccacaagaactgggtaatgcttcggagaacctg
ccgatgtcatcgcttattcccaatgtagggcaagcaatacaagggtttcagctaatgccg
ccagctccacagactattcttgatggccctgcttctcctcctcctcctcctcagtctgtt
ccagatggcagtgttcctttgtactctttggttcctccttctcagggacagatgcctggc
atcttggcttctccctctcatggaccgatatctggttttgaacctatagtctcaagctcg
gggtttggaataccgtatgaatctgaacagatgcccatgcaacccgtgctggaatatcaa
ccagtccaggagccagaaccgcagtcaagtaaccaagcttcccctgtaaggcagaccttc
tcccgagaaagaccgatggatttctatgaccgcatggcagaactggcaccaggacggaga
tccagatccacttcccagtcttcagtgcatatgggtcatggaagacggtctcgaacaacc
tctgaatcatctattcattcaatagagccagaaagacgtaactctgcagcaatgcaacct
tcccctcctccaccagcaatcttggaaactactacttcaaataaagcaccagactctaaa
aaggaaactaaggactcttcacttaaaaaggatgataggggatggcttagctggctgact
ggcaaaagaaaaaaaaacgaagcccatctaccagacgataagaataaatcgattgtatgg
gatgaaaaaaaaaagcgctgggtgaacttggatgaaccagaggaggagaacaaaccacca
cctccgcctccaaccaactttcctaaagttcaccagactctgccctctggacctgtcagc
ccaccaattggtgcacctccagttaatgtattttccaaaaaagctggaaccaggggacgt
tatgtggacatcctgaaccctggtggaaccaaaactaatgtttctgctcctgcccctgct
gatttgtttgctcctctagcaccaatacctattcctgcaaatctgtttgttccaagtgca
gtccctgaagagcagcagcccgttgaaggaaggagagcagaaagttctccaagctcagag
cagaccaatgcagctgcaaatacacaaccacagttttttaatccagcagcattgccttct
ggatctgaagtcccagcctcaaacactgaaggctcgcaatctggagagctttcgcgctct
agttcaatgagttcattatcacgtgaagtaagccagcatttaaatcaggttcccagccat
cctccaccacctgggggccttcaaggaggaacagttcagttttataacccttctcagttt
gcacaaccacctgccccaacaggaggccaaagattgggaagactaggccagagaaaatat
cctgcattaaagtga
DBGET
integrated database retrieval system
