KEGG   Latimeria chalumnae (coelacanth): 106701772
Entry
106701772         CDS       T02913                                 
Symbol
WDR18
Name
(RefSeq) WD repeat domain 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcm03009]
    106701772 (WDR18)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    106701772 (WDR18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Nup120_160 WDR54 Beta-prop_IP5PC_F Beta-prop_EIPR1 Lactonase
Other DBs
NCBI-GeneID: 106701772
NCBI-ProteinID: XP_014344044
Ensembl: ENSLACG00000015733
UniProt: H3B7I8
LinkDB
Position
Un
AA seq 431 aa
MAAPTEVIVSTDASGQLWNCSVSDLYAGANMLSYRGGNTSARALAVLNGEYLLGAQLGKN
YINVWELQRKDQLQQKIVCPGMVTCLTTSPNGLYILAGIAEGIYLWEVCSGNLLAVLNRH
YQDLTCLCFTDDSSHFISGGKDNLALVWNLCSVFQVELSKMPEPRHIWSRHTLPVTDIYC
GFGGPLARVVTASLDQTIKLWEISSGELLMSVVFDVGIMSVTLDPSENHIFCGGSDGSIF
QVNLFTWPIQKEKTFQTDKESSQTFKGHGNQVTCLSVSMDGSMLLSGSHDETVKLWDIQS
KQCLRTVAHKGPVTNAFIMHAPANMFNSECKPSVSLPKFNKHMHTADSGEDREGDGIMLR
LNRHLQGYDESYLEKMEKLCSIMCSATDKNVFGDGENTKVRIAELEDEVKTLKKINKDLY
DFSTQILTKQA
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggctgcgcccacggaggtaattgtgagcacggatgcttcgggccagctctggaactgt
tcggtttccgacctttacgccggggctaacatgctctcgtaccgaggagggaacacttcg
gctcgggctctagccgtcctgaacggggagtacctgttgggagcgcagctgggcaagaac
tacatcaacgtttgggaactgcagaggaaggaccagttacagcaaaagatagtctgtccg
ggaatggtaacatgcctgactacatctccaaatggcctttacatccttgcaggcattgca
gagggcatctatctgtgggaggtctgtagtgggaatctcctagctgtgttaaaccggcac
taccaagacctgacttgtctgtgcttcactgatgacagcagccatttcatctctggagga
aaggacaatctggccctggtttggaacctgtgcagtgtcttccaggtggaactctcaaaa
atgccagaaccccggcacatctggtctcgacacacgctccctgtgaccgatatttactgt
gggtttgggggtcccttagctcgggtggtgactgcctccctcgaccagactatcaagctt
tgggagatttcatctggtgagctgctgatgtctgtcgtctttgatgttgggattatgtca
gtgacccttgacccatcggagaatcacatcttttgtggtggcagtgatgggtctatcttt
caagttaacctcttcacttggcctattcagaaggagaagaccttccagactgataaggag
agcagccagacttttaaaggacatgggaatcaggttacatgtttatctgtatctatggat
ggaagtatgctgctgtctggctcacatgatgagactgtgaagctgtgggatatccagagc
aagcagtgtctaagaactgttgctcacaaaggtccagttaccaatgcttttatcatgcat
gctcctgccaacatgtttaactcagaatgcaagcccagtgtgagtctgccaaaattcaac
aagcacatgcacactgctgacagcggggaggacagggaaggagatggaataatgttacgc
ctaaatcgtcaccttcagggttatgatgaaagttatttagagaagatggaaaaattgtgt
tccataatgtgttctgcaactgataagaatgtttttggtgatggtgagaataccaaagtg
cgcatcgctgagctggaggatgaagttaaaaccctgaaaaagattaataaagatctgtat
gatttctcaacacaaatcctaactaaacaagcataa

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