Latimeria chalumnae (coelacanth): 106703120
Help
Entry
106703120 CDS
T02913
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes 1B
KO
K06636
structural maintenance of chromosome 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04110
Cell cycle
lcm04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106703120 (SMC1B)
04114 Oocyte meiosis
106703120 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
106703120 (SMC1B)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106703120 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
106703120 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
zf-RVT
CdiA_C_tRNase
Motif
Other DBs
NCBI-GeneID:
106703120
NCBI-ProteinID:
XP_014342703
Ensembl:
ENSLACG00000015959
LinkDB
All DBs
Position
Un
AA seq
1304 aa
AA seq
DB search
MGYLKHLEVENFKSWRGRQVIGPFKNFSCVIGPNGSGKSNVMDALSFVMGEKTAFLRVKS
VRELIHGAHIGKPVSSSARVTMVYCEENGEEKIFSRVVTGGCSDFHFNGRPISRSGYTAE
LEKIGIIVKARNCLVFQGAVESIAMKKPKERTRLFEQISNSCELAEEYEQKKKEMQKAEE
DAQFSFNRRKNMASERKHAKQEMEEADRYQLLLEDLKESRIRLHLFQLYHTEMKIDSLTS
KLNEKNAVVEKQKTHLSMVEEEVKSKKKELGKMSRDQQQIEKELKTHEDTLNHKRAQYIK
AKENTAHHLKKVEMAKKSLKDFEKHYANQKQEIQELELELLDVEKAMSEFEKKVEVEILS
GERAVELEESQLERYNELKESVRKRVATLAQQLEKLRWEQKADQEKMEFDHRKEKEVEGN
IKQIQHHIEDYLKRAEKLEEYINTCTSSLAEKKKCEEELTDEIEKSKVRIAEVNDELKGV
VGDLQNAGMEYHEGNRRQRRMEVLESLKRLYPDSVFGRMLDLCHPIHKKYQLSVTKVFGK
FMDAIAVATEKTARDCIRFLKEERAEPETFLALDYIDIKPINEKLREIKGGKMMIDVVQS
AAPHLKKVVQFICGNTVVCETVKEARHIAFDGPERVKTVALDGSLFLKSGVISGGLSDLR
FKARRWDEKQFSQLKERKDQLISELRELMKVQRKEADLKQLQAQCLGIQTRLKYSENELQ
QINKKYLASCYQVTELFSLCLPESLFQSLHSKWERELDIQMDNETWSEIWRICTRASREV
QSRLIQFKVIHRAYWYLSKMHKAGILDSDACWRCKSSPGTFLHMLWSCSRTRDLWREIAE
KVSLVLGVEIEDSVFQNFCAEIGVANIREYEGKQLKQQQEIDKKRSEFENHKTRLGIQLE
YSRSKLEKEIAKINLWKETVKKDEELTAKLAKEEGQLLKIVDETMGEQRDLKNRLLLKKS
ETNDFRKLVEEARKKLMTFIREVGKLQKELIVIETNLEQKKIERHNILLTCKLKDIQIIF
LAGSIEDITERESEAEEESTQAAERTFAREDALEIDYSILSEGLKELTSEKEVKAQLEKL
EQIVSAHENLLNKSMAPNMKAVENLQNVKNKFQEMTDAFEESRRKARVCRQEFERVKRKR
YELFIQCFEHVSVAVDQIYKKLCRNTSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMD
NLSGGEKSVAALALVFAIHSFRPAPFFVLDEVDAALDNTNIGKVTSYIREESREMLQVIV
ISLKEEFFSKADALIGVCPEYEECMFSRVLTLDLTPYPLIDNTE
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgggttacttaaaacacctggaagtggaaaattttaagtcgtggcgtgggcggcaggtg
atcggtccgtttaaaaacttcagctgcgttattggaccgaacgggtcaggaaaatccaat
gtcatggatgctctaagttttgtgatgggtgaaaagacagcttttcttagagttaaaagt
gttcgagaacttattcatggagctcacattggaaagccagtttcttcttctgctagagta
acaatggtgtactgtgaagaaaatggagaggaaaagatattttcaagagttgtgacaggg
ggatgttctgattttcactttaacgggagaccaatcagccgctcaggctacacagctgaa
ctggaaaaaattggcatcattgtaaaagcaaggaactgcttagtattccagggtgctgtg
gagtcaattgcaatgaaaaaacccaaagagaggacccggctgttcgaacaaattagtaac
tcatgtgaacttgcagaagagtatgagcaaaagaagaaggagatgcagaaagctgaagaa
gatgcacaattcagttttaacagaaggaaaaatatggcatcagaacgcaaacatgcaaag
caagaaatggaagaggctgatcgataccaactgctgttggaagacttgaaagaaagcagg
attcggttgcatctcttccagctttatcacacagaaatgaaaatcgactcactgactagc
aagttgaatgaaaagaatgcagtggtggagaaacagaaaacgcacctttctatggtggag
gaggaagtcaaatccaagaaaaaggaactgggcaagatgagcagagaccaacaacagata
gaaaaagaacttaaaacccatgaagatacccttaaccataagagagcccagtatatcaaa
gctaaagaaaatacagctcaccatctgaagaaagtggagatggcaaagaagtccctaaaa
gactttgagaaacattatgccaatcagaaacaagaaatccaagaactggagctagaacta
ttggatgtagagaaggcaatgagtgagtttgaaaagaaagtggaagtggagattttgagt
ggagagagagctgtggagctggaagaaagccagcttgaacggtataatgaattaaaggaa
tcagtgaggaagagagtagccactctggcccagcagcttgagaaactgcgatgggagcaa
aaggcagatcaggaaaagatggaatttgatcacaggaaggaaaaagaagtggaggggaac
ataaagcagatccagcatcatattgaagattatctaaaaagagcagagaagttggaagaa
tacatcaacacttgcacgagttctctggctgagaagaagaagtgtgaagaagaactgaca
gatgaaattgagaaatccaaggtccgtatagctgaggtgaatgatgagctgaagggtgtt
gttggtgacctacaaaatgcagggatggaatatcatgaagggaaccgcaggcagagaaga
atggaggtcttggaaagcctcaaaagattgtaccctgactctgtgtttggtagaatgctt
gatctgtgtcaccccatccataagaagtaccaactgtctgttactaaagtttttggcaag
ttcatggatgccattgcagtagctactgagaaaacagcaagagactgcatccgtttcctt
aaagaggaacgagctgagccagaaaccttccttgctctagactacattgatattaagcct
attaatgaaaaattgagagagatcaaaggagggaagatgatgattgatgttgtgcagagt
gccgcaccacacctgaagaaagtagttcagtttatatgtggcaacacggtggtctgtgag
actgtaaaggaagcgaggcacattgcatttgatggtccagagagggtgaaaacagttgca
cttgatgggtccctctttctgaagtctggtgtcatctctggaggattaagtgatctccga
ttcaaggccaggcgctgggatgaaaagcagttcagccagctaaaagagagaaaagatcag
ctaataagtgaactcagagaactaatgaaagtgcagcgaaaggaggctgacttgaagcag
ttacaagctcagtgtctgggaatccaaacccgactcaagtattctgagaatgagttacag
cagataaataagaagtacctggccagttgttaccaagtaacagaactctttagtctctgt
cttcctgaatcgctctttcaatccctccattctaaatgggagcgggagttggatattcaa
atggacaatgagacatggtcggagatatggaggatctgtacccgagcgtccagagaagtg
cagtcccgtcttatccagttcaaagttattcatcgggcgtactggtacctgagtaaaatg
cacaaagcaggcattctggactcggatgcgtgctggagatgcaagtcatccccagggaca
ttcctccatatgctttggtcttgctctaggacccgggatctttggcgggagatagcggag
aaagtatccctggttcttggggtggagattgaagattcagtttttcagaacttctgtgct
gagattggtgtggcaaacattcgagaatatgaagggaagcaactaaagcaacagcaagaa
atagataagaaaagatcagagtttgaaaaccataaaactaggcttggcattcaactggaa
tatagccgcagcaagcttgaaaaggagatagccaagatcaacttgtggaaggagacagtt
aaaaaagatgaggaattaacagctaaacttgccaaggaggaaggtcagttgttgaaaata
gtagatgaaactatgggagagcaacgggacctcaaaaatagattgttacttaaaaaatct
gaaactaatgattttcggaagctggtggaagaagctaggaagaaactgatgacttttatc
agggaggtgggaaagctgcagaaggaattgatagtcattgaaactaacctagaacagaaa
aaaatagagagacacaacatacttttgacatgcaagttgaaggatattcagataattttc
ctggcaggatcaatcgaggatataacagaaagagagagtgaggctgaagaagaaagcaca
caagctgcagaaagaacgtttgcgcgagaagatgctcttgagatagactacagtatcctc
agtgagggcctcaaggagctaacatctgaaaaagaggtcaaggcccaactggagaaactg
gaacaaatagtatcagcacatgagaatcttttaaacaagtcaatggcaccaaacatgaaa
gctgttgagaacctacagaatgttaaaaacaagtttcaggagatgacagatgcttttgaa
gaaagccgaaggaaagccagggtgtgcaggcaggagtttgagcgtgtgaagagaaaacga
tacgaactctttattcagtgctttgagcatgtctcggtggcagttgatcagatctacaag
aaactctgcaggaacaccagtgcacaggcattccttagccctgagaatccagaagaaccg
tacttggagggtattagctacaactgcgtggctcctggaaaacgcttcatgcccatggat
aatctgtcaggaggagagaaatctgtagctgcactagctctggtgtttgctatacacagt
ttccgacccgcccctttctttgtgctggatgaagttgacgccgctctggataacacaaac
attggaaaagtaacaagttatatcagagaggagtccagggaaatgctgcaagtgatagtt
atttctctaaaggaggagtttttttccaaagcagatgcactgattggagtttgcccagag
tatgaagaatgcatgtttagccgtgtactaactctagatcttactccatatccactcatt
gacaacactgaatga
DBGET
integrated database retrieval system
