Latimeria chalumnae (coelacanth): 106705987
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Entry
106705987 CDS
T02913
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcm00535
]
106705987
Proteoglycans [BR:
lcm00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
106705987
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
106705987
NCBI-ProteinID:
XP_014351734
LinkDB
All DBs
Position
Un
AA seq
385 aa
AA seq
DB search
MHNHSNMVRDATGPILTRTIQNYTEQNNQSSNCAGVTKKKYNVILFTANVVLSLICADTC
KCSEKQDTIYCNGAGFKTPPKEMPASAVSLNFAENSFRILIFNSFGNMSKLQVLWLDGND
LTFIYPRAFVALIKLRELSLSRNWRLSYLHPNTFQGLKNLLILNLSKCNIFKIHPLVFSY
LTSLKTLDLSSNKMRYIPEALRNLPNITSLSLEKNLIEAIGKYSLKYLKTLQELNLKRNK
IWVIQNDAFNHPNKLSVLNLGHNCISYLPNQLFEGLSWLKVMHLEANKILKISCSFSSLT
NLRKLHLNNNRISSIAKYAFNSLKQLELLHLSKNNLTFLPNYLFLPLVKLRYAFLAHNPW
ICDCNLMWLFDWIPRVYSWVKIKEQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatcacagtaacatggttagggatgctacaggtcctattttgaccaggacaatc
cagaattacacggagcaaaataaccaaagtagtaactgtgctggtgtgacaaagaagaag
tacaatgttattttgttcacagcaaacgtggtgctttctttaatttgtgctgatacctgc
aagtgttctgagaagcaggatactatctactgcaatggagctggattcaagaccccacca
aaggaaatgccagcatctgctgtttctttaaactttgctgaaaattctttcaggatactt
atcttcaattcttttggaaatatgtctaaactgcaagttctgtggctagacggtaatgac
ttgactttcatatatccaagagcttttgttgctctcataaagctgagagaactgagtctg
agcagaaactggaggctgagctaccttcaccccaacacctttcaaggactcaaaaatctc
ctcatcctcaacctgtcgaaatgcaatatctttaaaatccaccctctagtattttcctac
ctcacttccttaaaaactcttgatctgagctctaataaaatgcgttatattcctgaagct
ttgagaaacctaccgaatatcacaagcctgtctctggaaaaaaatctaatagaagcaata
ggaaagtattccttaaaatatcttaagactttgcaggagctcaatctaaagaggaacaag
atctgggtaattcagaatgacgcctttaatcacccaaataaactaagtgtattaaactta
ggacacaattgcatatcttatttgcctaatcagctttttgaaggtctgagttggcttaaa
gttatgcacctcgaagccaacaaaatactaaaaattagttgctcctttagcagtcttacc
aatttaagaaagctacacctgaataacaatcgcatatcctcgattgcaaagtatgcgttt
aatagtttgaaacaactggagttgcttcatttaagcaaaaataatttgacattccttcca
aattatttgtttttaccactggtgaagttgagatatgcgtttcttgcacacaatccctgg
atctgtgattgcaacctgatgtggttatttgactggattcccagggtatattcctgggtg
aagatcaaagaacaatga
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