Leuconostoc carnosum: C270_01970
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Entry
C270_01970 CDS
T02321
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lcn
Leuconostoc carnosum
Brite
KEGG Orthology (KO) [BR:
lcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcn03009
]
C270_01970
Enzymes [BR:
lcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C270_01970
Ribosome biogenesis [BR:
lcn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C270_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_15
Methyltransf_31
Cons_hypoth95
Methyltransf_25
RrnaAD
MTS
TRM5-TYW2_MTfase
PCMT
DOT1
Methyltransf_11
Methyltransf_4
PrmA
N6_N4_Mtase
Ubie_methyltran
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AFT81311
UniProt:
K0DBL3
LinkDB
All DBs
Position
411773..413167
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AA seq
464 aa
AA seq
DB search
MAKANRVYKEKAPVVKNQEVEATVVDITYQGMGVIKIDNFPIFVVDAIPGEIVRVGITKV
LKSYAFGRVSKRIQSSPNRAENVNQDAIATGIAPLANLKYDAQLIFKQEQVVQLFKKVNI
DVDVNATIGMENPYRYRNKAQVPVKMINGRLETGFYRRGSHKLVPIEDFYIQDEKVDEAV
TVTRDILRDLGISAYDETTKKGVIRHIMARRGYYSYELMVVIVTHSKKLPEAEAIATQLQ
AKLPELKSFIHNINHEDNNVIMGEQNETIWGANEIHDQLMSKDFVIGPNSFYQVNPQTMA
VLYSLAAEKANLKPTDIVVDAYSGIGTITLSIADQVKKVYGVEVVADAVADAKKNAKNNH
VDNVEFVTADAPEQMEKWATEGLKPNVVFVDPPRKGLTAELISAVSAMKPETFVYISCNP
ATLARDAVQILDEGFEIDGPVQPIDQFPQTTHVEAITVFKRVNK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagctaatcgtgtatacaaagagaaggcaccagtagtcaaaaatcaagaggtt
gaagctactgtcgtggatataacctatcaaggcatgggggttatcaaaattgataacttt
cctatttttgtggtagatgcaattcctggtgaaatagttagagttggtattacaaaagta
ttgaagagttacgcttttggacgtgtatcaaagcgcatacaatcatcacctaatcgtgcc
gaaaatgtgaatcaagatgctattgcaactggtattgcaccactagctaacttgaaatac
gacgcacaattaatttttaaacaggaacaggttgtgcaattatttaagaaagttaatatc
gatgttgatgtaaatgcaacaattggtatggaaaatccatataggtatcgaaataaggca
caagtaccagtaaaaatgataaatggtcgtttggaaactggtttttaccgtcgcggatca
cataaactggtaccaattgaagatttttatattcaagatgaaaaagttgatgaagcagtg
actgtgacacgagatattttacgtgatttaggcatttcagcttatgatgagacgactaaa
aaaggtgttatccgtcatattatggcacgccgtggatactattcatatgaattaatggta
gttattgtgacacatagtaaaaagttaccagaagcagaggcaattgctacacagttacag
gcaaaactccctgaattaaagagctttatccacaacattaatcatgaagacaataacgtg
attatgggtgaacaaaatgagactatttggggtgctaatgaaattcatgaccaattaatg
agcaaagattttgttatcggacctaattcgttttatcaagttaatccacaaaccatggcg
gtattgtattcattagcagccgaaaaagctaatttgaagccaactgatattgtggtggat
gcttattctggtattggaacaattactttatcaatcgctgaccaggtgaagaaagtttat
ggtgttgaggttgtggcagatgctgtagctgatgccaaaaagaatgctaagaataatcat
gttgataatgttgaatttgtcacagcagatgcacccgaacaaatggaaaaatgggcaaca
gaaggtctaaaaccaaatgttgtttttgttgatccaccacgaaagggattgacagcagaa
ctgatttcagcagtgagtgcgatgaaacctgagacttttgtttatattagttgtaatcca
gcgacattagcacgtgatgcggttcaaattttggacgaagggtttgaaattgatggtcct
gtacaacctattgaccaattccctcaaacaacgcatgttgaagctattacagtatttaag
cgtgttaacaagtag
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