Leuconostoc carnosum: C270_02915
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Entry
C270_02915 CDS
T02321
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lcn
Leuconostoc carnosum
Brite
KEGG Orthology (KO) [BR:
lcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcn03400
]
C270_02915
Enzymes [BR:
lcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C270_02915
DNA repair and recombination proteins [BR:
lcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C270_02915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
PDDEXK_1
ResIII
AAA_30
AAA_12
PRK
Mg_chelatase
KdpD
AAA_7
AAA_11
AAA_16
DUF4358
Motif
Other DBs
NCBI-ProteinID:
AFT81496
UniProt:
K0DC29
LinkDB
All DBs
Position
605007..608720
Genome browser
AA seq
1237 aa
AA seq
DB search
MATRFTENQQQAVYETGHNILVAASAGSGKTTVLIERLIQKILSGVSVENFLIVTFTNAA
AQEMRERLEKAIEKRMHSADAAQKRFLQEQLLLLPAANISTIDAYALRVIENYYHIIGLD
PQFRLLSDTAERDMLRQDVLNDVFAQFYDESHEQNSDFLALVANFGNPNNDKSLQQIVLK
LADFAEARPDGDQWLTELSENYLPMQQDLTQTTMYQEAILPQLSSVVNQLLGQAQNVLVT
IEGEPVFNKTQLAFEALVSYLSNIQSQLTESNWDSLRELLLQMPKVSMETKSKKAIKEDA
QLLDILSQATIVKNQIIGSDSEMKSLAQTFFQFNQQQWRQIEASALKLVSTLIDVTHTFR
EDFSVEKRNDKLLDFPDLGTLALQILEDDATRRTINSQFSEILVDEYQDINQLQEKLLTQ
VSNGHNMYMVGDVKQSIYGFRQAEPTLFTSKYKRFDNSANEDIRIELADNFRSQNNVTRA
TNLIFTQLMDEKLGDIAYTGEAKLVPKAAYPEIVPAIFDLDIIQQVNTKKTISESHESDE
QAFEKRQAQYALLANKILALRQTSIYDRKADPAGMRPVEYGDMAILTRSKSGYIDLVAAL
REAGIPTQVESVGNYFQTMEVYLMLDVLRVIDNPHQDIPLAAVLRSPMFNFNENDLASIR
LADKKHDYWTALQIFAKNDQRGEKFLSLFQKWHKLAIQNDLVTLIWTIFDDTAWLDYVAG
MPGGRQRQANLHALYDYARTYQTNTNAGLFRFVRYIEQLQENDGQLGEAPQEADEQAVRI
MTIHASKGLEFPIVFLPEFDKAFNTKDMTNPVLIQKNEGIGIEYLQPDALVAMPTLQKLA
VKNALKRQSWSEEMRLLYVALTRAEQQLHIIGTIKVDDEGSNDRLTRLWARAKETTGQFL
PEDLRLDAKSYLEWVLISLARTKNATLESWLGDGEPPHMLGSETSLEAQFDVKLITEQDI
ESVSSTISVDQVTPVSDDYDAKDFTLAEQTINYQYPNYLATNTAAYQSVSEMKRLFEDPD
RTELQELKVQEDGRFEPARELVSDTLVLPKFMTDGSQKPSSAAVGTATHLILQLVDFDQP
ITRDTLETIRDTLVTNGRMIEPVAALINIDSLLRFLDTPFAKSLTQHAKSLKREVTFAMI
MPAKHIYAGISDEAPVLVHGIIDGYFIDEATHTVTIFDYKTDFVRHDRLAEDLQKLVARY
KGQLNIYKAALQQEFPTYHFNAPQLVVLHTGQVIDVN
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgatttaccgaaaatcaacaacaggctgtttatgaaacgggacataatatt
ttagttgccgcttcagccggttctggtaaaacaacagtacttattgaacgattaattcaa
aaaatattatccggtgtgagtgttgaaaattttttgattgtgacctttactaatgctgcg
gcacaagagatgagagaacgtttggaaaaagctattgaaaaacggatgcactcagctgat
gcagcgcaaaagcgctttttacaagaacaattactgttactaccagcagctaatatttca
acaattgatgcctatgctttacgggttattgaaaattattatcatattattgggttagat
ccacaattccgtttattgtccgacacagctgaacgtgatatgctacggcaagatgttctc
aacgatgtatttgcacaattttatgacgaatcacatgaacaaaatagtgatttcttagca
ctggtagcaaattttggtaatccaaataatgataaatctttgcagcaaattgtcttaaaa
ttagctgattttgctgaagcgcgaccagatggtgatcagtggttaactgagctcagtgaa
aattatttaccaatgcaacaagatttaacacagacaaccatgtatcaagaggcaattttg
cctcaactttcaagcgttgtcaatcaactactaggtcaagcacagaatgtgctagtcacc
attgaaggcgaaccagtttttaacaagacacagctcgcttttgaggcactcgtgagttat
ctttccaatattcaaagtcagttaacagaatcaaattgggatagtttgcgagaattgctt
ttgcaaatgccaaaagtaagcatggaaacaaagagcaaaaaagcaatcaaagaggatgcg
caattactagatattttgtcgcaagcaacgatcgtaaaaaatcagattattggttctgat
tctgaaatgaagtcgttagcgcaaactttttttcaatttaatcaacagcagtggcgtcaa
attgaagcatcagcattaaaattggttagtaccctaattgatgtgacacatacttttcgt
gaggatttctcagttgaaaaacgtaacgataagttattggatttccctgatttaggcacc
ttggctttacaaattttagaagatgatgcaacgagacggacgattaatagccaattttct
gaaatattagttgatgagtaccaggatattaaccagttacaagaaaagttattaacgcaa
gtgtcaaatggacataatatgtacatggttggagatgttaaacagagcatttatggcttc
cgtcaagcggaaccaactttattcacgagcaaatacaaacgcttcgataattcagctaat
gaagatattcgaattgaactagctgataactttcgttcgcaaaataatgtgacccgagca
accaacttaatttttacgcaattaatggatgaaaaactaggggatattgcttatactggg
gaagcaaagttagtgccaaaagcagcttatcctgaaatagtaccagctatttttgattta
gatattattcagcaagtgaatacaaagaaaactatttctgagagtcatgagagcgacgaa
caagcatttgaaaagcggcaagcacaatatgctttattagcgaataaaattttggcttta
cggcagacttctatttacgaccgtaaagctgatccagccggcatgcggcctgttgaatat
ggcgacatggctatattgacgcgttcaaaatcggggtacattgatcttgttgcggccctt
agagaagctggcattccaactcaagtagaatcagttggtaactactttcaaacaatggaa
gtttatttaatgttagatgtactgcgtgtcattgataacccacaccaagatataccatta
gccgctgttttacgttcaccgatgtttaattttaatgaaaatgatttagccagtatacgt
ttagcagataaaaagcatgactattggactgctttgcagatttttgctaaaaacgatcaa
cgtggcgaaaaatttttgtcgttatttcagaaatggcataaattagccattcaaaatgat
ttagtgacacttatctggactatctttgatgatacggcatggttagactatgttgctggt
atgcctggtggtagacagcgtcaagctaatttacacgcgctatatgattatgcgcgcaca
tatcaaacaaatacaaatgctggattattccgttttgtacgttatattgagcaattacaa
gaaaatgacggacaacttggtgaagcgccacaagaagctgatgaacaagcagtgcggatt
atgactattcatgcatcgaagggattggaattcccaattgtatttctgcctgaatttgat
aaagcttttaatacgaaagatatgactaatcccgtcttgattcaaaaaaatgaagggatt
gggattgaatatcttcaacctgatgccttagtagcgatgccgacactacaaaaattagcc
gttaaaaatgctttaaaacgtcaaagctggtccgaagagatgcgactcctgtatgtggct
ttgacgcgtgctgaacaacaattacatattattggtacgatcaaagtagatgatgaaggt
agcaatgaccgactaactagattatgggcacgtgctaaagaaacaacaggtcaattttta
ccagaagatttacgtttagatgcaaaatcttatttagaatgggtgctaattagtttggca
cgtactaaaaatgcaacactagaatcatggttaggggacggtgagccaccacatatgctt
ggcagtgagacgtcattagaagctcaattcgatgtcaaattaatcactgaacaggatatt
gagtcagtatcatccactatttcagtagatcaagtcacacctgtatctgatgattatgat
gccaaggattttaccttagcagaacaaaccatcaattatcagtacccaaactatctggct
actaatacagcggcttaccaatcagtcagtgaaatgaagcgtctctttgaagatccagat
cgtactgaattacaagaattaaaagtacaggaagatggacgttttgaaccagcacgtgaa
ttggtcagtgatacccttgttttaccaaaattcatgacagatggctctcaaaagccttct
agtgctgcagtgggaacagcgacacatttaattttacaattggttgattttgatcaacca
atcacgcgagacactttggaaactatacgagacacactagtgacaaatggccgaatgatt
gaaccagtagcagccttgattaatattgatagtttattgagatttttggacacaccattt
gccaaatcactaacacagcacgccaaaagtttaaagcgtgaggtgacttttgctatgatt
atgcctgctaaacatatttatgcaggcatttctgatgaggcaccagtccttgttcacggt
atcattgatggttactttattgatgaagcaactcatacagtaacaatttttgattacaag
acagattttgtgcggcacgatcgtttagcagaggatttacaaaagcttgttgcacgttat
aaaggacaactgaatatctacaaagcagcacttcaacaagaatttccaacttatcatttc
aatgcaccgcaattagttgtactgcatactggacaagttattgacgtgaattaa
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